RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
CTPS1-203ENST00000463285 FYB1O15117 783 aa12.31□□□□□ -0.44
CTPS1-203ENST00000463285 CEP350Q5VT06 3117 aa12.31□□□□□ -0.44
CTPS1-203ENST00000463285 CYP27B1O15528 508 aa12.3□□□□□ -0.44
CTPS1-203ENST00000463285 TOGARAM1Q9Y4F4 1720 aa12.3□□□□□ -0.44
CTPS1-203ENST00000463285 INSRP06213 1382 aa12.3□□□□□ -0.44
CTPS1-203ENST00000463285 NSD3Q9BZ95 1437 aa12.29□□□□□ -0.44
CTPS1-203ENST00000463285 FLT4P35916 1363 aa12.29□□□□□ -0.44
CTPS1-203ENST00000463285 ITGB4P16144 1822 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 KIF3CO14782 793 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 SSFA2P28290 1259 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTPS1-203ENST00000463285 LINC00116Q8NCU8 138 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 PIGBQ92521 554 aa12.28□□□□□ -0.44
CTPS1-203ENST00000463285 LOC102724428A0A0B4J2F2 783 aa12.27□□□□□ -0.45
CTPS1-203ENST00000463285 GNPATO15228 680 aa12.27□□□□□ -0.45
CTPS1-203ENST00000463285 SIK1P57059 783 aa12.27□□□□□ -0.45
CTPS1-203ENST00000463285 KIF20BQ96Q89 1820 aa12.26□□□□□ -0.45
CTPS1-203ENST00000463285 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
CTPS1-203ENST00000463285 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
CTPS1-203ENST00000463285 EMILIN1Q9Y6C2 1016 aa12.26□□□□□ -0.45
CTPS1-203ENST00000463285 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
CTPS1-203ENST00000463285 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
CTPS1-203ENST00000463285 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
CTPS1-203ENST00000463285 TMF1P82094 1093 aa12.25□□□□□ -0.45
CTPS1-203ENST00000463285 ITPK1Q13572 414 aa12.25□□□□□ -0.45
CTPS1-203ENST00000463285 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
CTPS1-203ENST00000463285 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
CTPS1-203ENST00000463285 MMP10P09238 476 aa12.24□□□□□ -0.45
CTPS1-203ENST00000463285 APLP1P51693 650 aa12.24□□□□□ -0.45
CTPS1-203ENST00000463285 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
CTPS1-203ENST00000463285 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
CTPS1-203ENST00000463285 CICQ96RK0 1608 aaPredicted RBP12.23□□□□□ -0.45
CTPS1-203ENST00000463285 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
CTPS1-203ENST00000463285 NKX1-1Q15270 411 aaPredicted RBP12.23□□□□□ -0.45
CTPS1-203ENST00000463285 ASAP1Q9ULH1 1129 aa12.23□□□□□ -0.45
CTPS1-203ENST00000463285 TOMM70O94826 608 aa12.22□□□□□ -0.45
CTPS1-203ENST00000463285 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
CTPS1-203ENST00000463285 N4BP2Q86UW6 1770 aaPredicted RBP12.21□□□□□ -0.45
CTPS1-203ENST00000463285 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
CTPS1-203ENST00000463285 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
CTPS1-203ENST00000463285 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.45
CTPS1-203ENST00000463285 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 FCHSD2O94868 740 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 PHKG2P15735 406 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 TGFB2P61812 414 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 EYA1Q99502 592 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 NMRK2Q9NPI5 230 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
CTPS1-203ENST00000463285 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
CTPS1-203ENST00000463285 DPEP1P16444 411 aa12.19□□□□□ -0.46
CTPS1-203ENST00000463285 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
CTPS1-203ENST00000463285 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
CTPS1-203ENST00000463285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTPS1-203ENST00000463285 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
CTPS1-203ENST00000463285 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
CTPS1-203ENST00000463285 DNAJC5GQ8N7S2 189 aa12.18□□□□□ -0.46
CTPS1-203ENST00000463285 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
CTPS1-203ENST00000463285 KDRP35968 1356 aa12.18□□□□□ -0.46
CTPS1-203ENST00000463285 RFC4P35249 363 aa12.17□□□□□ -0.46
CTPS1-203ENST00000463285 C16orf71Q8IYS4 520 aaPredicted RBP12.17□□□□□ -0.46
CTPS1-203ENST00000463285 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
CTPS1-203ENST00000463285 PARP3Q9Y6F1 533 aa12.17□□□□□ -0.46
CTPS1-203ENST00000463285 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
CTPS1-203ENST00000463285 GYS1P13807 737 aa12.16□□□□□ -0.46
CTPS1-203ENST00000463285 C9orf131Q5VYM1 1079 aa12.16□□□□□ -0.46
CTPS1-203ENST00000463285 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
CTPS1-203ENST00000463285 C4AP0C0L4 1744 aa12.16□□□□□ -0.46
CTPS1-203ENST00000463285 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
CTPS1-203ENST00000463285 WDR90Q96KV7 1748 aa12.15□□□□□ -0.46
CTPS1-203ENST00000463285 HTRA3P83110 453 aa12.15□□□□□ -0.46
CTPS1-203ENST00000463285 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CTPS1-203ENST00000463285 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
CTPS1-203ENST00000463285 CNTNAP4Q9C0A0 1308 aa12.14□□□□□ -0.47
CTPS1-203ENST00000463285 ERVV-2B6SEH9 535 aa12.14□□□□□ -0.47
CTPS1-203ENST00000463285 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
CTPS1-203ENST00000463285 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-203ENST00000463285 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
CTPS1-203ENST00000463285 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
CTPS1-203ENST00000463285 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-203ENST00000463285 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
CTPS1-203ENST00000463285 PLEKHG2Q9H7P9 1386 aa12.14□□□□□ -0.47
CTPS1-203ENST00000463285 KCPQ6ZWJ8 1503 aa12.13□□□□□ -0.47
CTPS1-203ENST00000463285 CABP4P57796 275 aa12.13□□□□□ -0.47
CTPS1-203ENST00000463285 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
CTPS1-203ENST00000463285 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
CTPS1-203ENST00000463285 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
CTPS1-203ENST00000463285 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
CTPS1-203ENST00000463285 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
CTPS1-203ENST00000463285 COL5A3P25940 1745 aaPredicted RBP12.13□□□□□ -0.47
CTPS1-203ENST00000463285 KDM2BQ8NHM5 1336 aa12.12□□□□□ -0.47
CTPS1-203ENST00000463285 HSP90AB1P08238 724 aaKnown RBP12.12□□□□□ -0.47
CTPS1-203ENST00000463285 KCNA3P22001 575 aa12.12□□□□□ -0.47
CTPS1-203ENST00000463285 DCAF5Q96JK2 942 aa12.12□□□□□ -0.47
CTPS1-203ENST00000463285 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms