RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ERVV-2B6SEH9 535 aa27.19■■□□□ 1.94
VARS-221ENST00000463184 HSP90AB1P08238 724 aaKnown RBP27.19■■□□□ 1.94
VARS-221ENST00000463184 EIF4G2P78344 907 aaKnown RBP eCLIP27.19■■□□□ 1.94
VARS-221ENST00000463184 PANK3Q9H999 370 aa27.18■■□□□ 1.94
VARS-221ENST00000463184 ATP10DQ9P241 1426 aa27.17■■□□□ 1.94
VARS-221ENST00000463184 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
VARS-221ENST00000463184 PLEKHO1Q53GL0 409 aaPredicted RBP27.16■■□□□ 1.94
VARS-221ENST00000463184 HSPA5P11021 654 aaKnown RBP27.14■■□□□ 1.94
VARS-221ENST00000463184 AMOTQ4VCS5 1084 aa27.14■■□□□ 1.94
VARS-221ENST00000463184 TRAPPC3LQ5T215 181 aa27.14■■□□□ 1.94
VARS-221ENST00000463184 GPBP1L1Q9HC44 474 aaPredicted RBP27.14■■□□□ 1.94
VARS-221ENST00000463184 RTCBQ9Y3I0 505 aaKnown RBP27.14■■□□□ 1.94
VARS-221ENST00000463184 KDRP35968 1356 aa27.13■■□□□ 1.93
VARS-221ENST00000463184 MMP10P09238 476 aa27.12■■□□□ 1.93
VARS-221ENST00000463184 RC3H1Q5TC82 1133 aaKnown RBP27.12■■□□□ 1.93
VARS-221ENST00000463184 RBM42Q9BTD8 480 aaKnown RBP27.12■■□□□ 1.93
VARS-221ENST00000463184 ADCY9O60503 1353 aa27.11■■□□□ 1.93
VARS-221ENST00000463184 NLGN1Q8N2Q7 840 aa27.11■■□□□ 1.93
VARS-221ENST00000463184 SLC4A9Q96Q91 983 aa27.11■■□□□ 1.93
VARS-221ENST00000463184 ADRA2BP18089 450 aa27.1■■□□□ 1.93
VARS-221ENST00000463184 CABP4P57796 275 aa27.1■■□□□ 1.93
VARS-221ENST00000463184 ZNF530Q6P9A1 599 aaPredicted RBP27.1■■□□□ 1.93
VARS-221ENST00000463184 WWC3Q9ULE0 1092 aa27.1■■□□□ 1.93
VARS-221ENST00000463184 ZNF831Q5JPB2 1677 aa27.08■■□□□ 1.93
VARS-221ENST00000463184 MORC1Q86VD1 984 aa27.08■■□□□ 1.93
VARS-221ENST00000463184 CNTNAP4Q9C0A0 1308 aa27.08■■□□□ 1.93
VARS-221ENST00000463184 TGFB2P61812 414 aa27.07■■□□□ 1.92
VARS-221ENST00000463184 ARHGEF1Q92888 912 aaKnown RBP27.07■■□□□ 1.92
VARS-221ENST00000463184 RPS6KA4O75676 772 aa27.06■■□□□ 1.92
VARS-221ENST00000463184 MTHFSP49914 203 aa27.06■■□□□ 1.92
VARS-221ENST00000463184 KDM6AO15550 1401 aaPredicted RBP27.06■■□□□ 1.92
VARS-221ENST00000463184 C1orf141Q5JVX7 400 aa27.05■■□□□ 1.92
VARS-221ENST00000463184 RFC4P35249 363 aa27.04■■□□□ 1.92
VARS-221ENST00000463184 ZNF526Q8TF50 670 aaPredicted RBP27.04■■□□□ 1.92
VARS-221ENST00000463184 AEBP1Q8IUX7 1158 aa27.03■■□□□ 1.92
VARS-221ENST00000463184 CCER1Q8TC90 406 aaPredicted RBP27.03■■□□□ 1.92
VARS-221ENST00000463184 KNSTRNQ9Y448 316 aa27.03■■□□□ 1.92
VARS-221ENST00000463184 GYS1P13807 737 aa27.02■■□□□ 1.92
VARS-221ENST00000463184 PXDNLA1KZ92 1463 aa27.01■■□□□ 1.91
VARS-221ENST00000463184 SULT6B1Q6IMI4 303 aa27.01■■□□□ 1.91
VARS-221ENST00000463184 NFATC2IPQ8NCF5 419 aa27.01■■□□□ 1.91
VARS-221ENST00000463184 CCDC87Q9NVE4 849 aa27.01■■□□□ 1.91
VARS-221ENST00000463184 CEP350Q5VT06 3117 aa27.01■■□□□ 1.91
VARS-221ENST00000463184 KIF13BQ9NQT8 1826 aa27■■□□□ 1.91
VARS-221ENST00000463184 COL5A3P25940 1745 aaPredicted RBP27■■□□□ 1.91
VARS-221ENST00000463184 PARP3Q9Y6F1 533 aa27■■□□□ 1.91
VARS-221ENST00000463184 CICQ96RK0 1608 aaPredicted RBP27■■□□□ 1.91
VARS-221ENST00000463184 A0A0G2JLW4 131 aa26.99■■□□□ 1.91
VARS-221ENST00000463184 PTCD1O75127 700 aaKnown RBP26.99■■□□□ 1.91
VARS-221ENST00000463184 IL13P35225 146 aa26.99■■□□□ 1.91
VARS-221ENST00000463184 C10orf71Q711Q0 1435 aa26.99■■□□□ 1.91
VARS-221ENST00000463184 BCS1LQ9Y276 419 aa26.98■■□□□ 1.91
VARS-221ENST00000463184 CRKLP46109 303 aaKnown RBP26.96■■□□□ 1.91
VARS-221ENST00000463184 MYH14Q7Z406 1995 aaKnown RBP26.95■■□□□ 1.91
VARS-221ENST00000463184 DPEP1P16444 411 aa26.95■■□□□ 1.9
VARS-221ENST00000463184 HSPA6P17066 643 aa26.95■■□□□ 1.9
VARS-221ENST00000463184 C4AP0C0L4 1744 aa26.94■■□□□ 1.9
VARS-221ENST00000463184 KIAA1551Q9HCM1 1747 aa26.94■■□□□ 1.9
VARS-221ENST00000463184 N4BP2Q86UW6 1770 aaPredicted RBP26.94■■□□□ 1.9
VARS-221ENST00000463184 AKAP4Q5JQC9 854 aa26.93■■□□□ 1.9
VARS-221ENST00000463184 KIF3CO14782 793 aa26.92■■□□□ 1.9
VARS-221ENST00000463184 AMER1Q5JTC6 1135 aaPredicted RBP26.92■■□□□ 1.9
VARS-221ENST00000463184 ARHGAP27Q6ZUM4 889 aa26.92■■□□□ 1.9
VARS-221ENST00000463184 FCHSD2O94868 740 aa26.91■■□□□ 1.9
VARS-221ENST00000463184 USP42Q9H9J4 1324 aaKnown RBP26.9■■□□□ 1.9
VARS-221ENST00000463184 KCNA3P22001 575 aa26.89■■□□□ 1.9
VARS-221ENST00000463184 SLC52A2Q9HAB3 445 aa26.89■■□□□ 1.9
VARS-221ENST00000463184 SRP68Q9UHB9 627 aaKnown RBP26.89■■□□□ 1.9
VARS-221ENST00000463184 FKBP8Q14318 412 aa26.88■■□□□ 1.89
VARS-221ENST00000463184 INTS5Q6P9B9 1019 aaKnown RBP26.88■■□□□ 1.89
VARS-221ENST00000463184 SCN11AQ9UI33 1791 aa26.87■■□□□ 1.89
VARS-221ENST00000463184 PIM2Q9P1W9 311 aa26.87■■□□□ 1.89
VARS-221ENST00000463184 LGR6Q9HBX8 967 aa26.86■■□□□ 1.89
VARS-221ENST00000463184 TJP1Q07157 1748 aa26.85■■□□□ 1.89
VARS-221ENST00000463184 RNMTO43148 476 aaKnown RBP26.84■■□□□ 1.89
VARS-221ENST00000463184 ZPR1O75312 459 aa26.84■■□□□ 1.89
VARS-221ENST00000463184 DDR1Q08345 913 aa26.84■■□□□ 1.89
VARS-221ENST00000463184 DNAJC10Q8IXB1 793 aa26.84■■□□□ 1.89
VARS-221ENST00000463184 BRCA1P38398 1863 aaKnown RBP26.83■■□□□ 1.89
VARS-221ENST00000463184 HMOX1P09601 288 aa26.83■■□□□ 1.89
VARS-221ENST00000463184 TM4SF1P30408 202 aa26.83■■□□□ 1.89
VARS-221ENST00000463184 DALRD3Q5D0E6 543 aaKnown RBP26.83■■□□□ 1.89
VARS-221ENST00000463184 KIF7Q2M1P5 1343 aa26.83■■□□□ 1.89
VARS-221ENST00000463184 TOMM70O94826 608 aa26.82■■□□□ 1.88
VARS-221ENST00000463184 POLRMTO00411 1230 aaKnown RBP26.81■■□□□ 1.88
VARS-221ENST00000463184 CYP19A1P11511 503 aaPredicted RBP26.8■■□□□ 1.88
VARS-221ENST00000463184 SLC39A6Q13433 755 aa26.8■■□□□ 1.88
VARS-221ENST00000463184 IFFO2Q5TF58 517 aa26.8■■□□□ 1.88
VARS-221ENST00000463184 C9orf131Q5VYM1 1079 aa26.8■■□□□ 1.88
VARS-221ENST00000463184 USPL1Q5W0Q7 1092 aa26.8■■□□□ 1.88
VARS-221ENST00000463184 SOS1Q07889 1333 aaPredicted RBP26.8■■□□□ 1.88
VARS-221ENST00000463184 PER1O15534 1290 aaPredicted RBP26.79■■□□□ 1.88
VARS-221ENST00000463184 DIAPH1O60610 1272 aaKnown RBP26.79■■□□□ 1.88
VARS-221ENST00000463184 MTHFSDQ2M296 383 aaKnown RBP26.79■■□□□ 1.88
VARS-221ENST00000463184 MRC1P22897 1456 aa26.79■■□□□ 1.88
VARS-221ENST00000463184 ARFGEF1Q9Y6D6 1849 aa26.79■■□□□ 1.88
VARS-221ENST00000463184 VSIG10Q8N0Z9 540 aa26.78■■□□□ 1.88
VARS-221ENST00000463184 ADAMTS7Q9UKP4 1686 aa26.77■■□□□ 1.88
VARS-221ENST00000463184 APLP1P51693 650 aa26.77■■□□□ 1.88
VARS-221ENST00000463184 NARFQ9UHQ1 456 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms