RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 FLT4P35916 1363 aa11.42□□□□□ -0.58
TMEM254-207ENST00000463029 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
TMEM254-207ENST00000463029 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 RGPD2P0DJD1 1756 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 PPM1GO15355 546 aaPredicted RBP11.41□□□□□ -0.58
TMEM254-207ENST00000463029 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 PCDHB13Q9Y5F0 798 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
TMEM254-207ENST00000463029 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
TMEM254-207ENST00000463029 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.58
TMEM254-207ENST00000463029 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
TMEM254-207ENST00000463029 GSE1Q14687 1217 aa11.4□□□□□ -0.58
TMEM254-207ENST00000463029 GPR162Q16538 588 aa11.4□□□□□ -0.58
TMEM254-207ENST00000463029 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
TMEM254-207ENST00000463029 ZNF784Q8NCA9 323 aaPredicted RBP11.4□□□□□ -0.58
TMEM254-207ENST00000463029 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
TMEM254-207ENST00000463029 EMILIN1Q9Y6C2 1016 aa11.4□□□□□ -0.58
TMEM254-207ENST00000463029 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
TMEM254-207ENST00000463029 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
TMEM254-207ENST00000463029 COL23A1Q86Y22 540 aaPredicted RBP11.38□□□□□ -0.59
TMEM254-207ENST00000463029 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
TMEM254-207ENST00000463029 PALLDQ8WX93 1383 aa11.38□□□□□ -0.59
TMEM254-207ENST00000463029 LY75O60449 1722 aa11.38□□□□□ -0.59
TMEM254-207ENST00000463029 CYP27B1O15528 508 aa11.37□□□□□ -0.59
TMEM254-207ENST00000463029 MSL1Q68DK7 614 aa11.37□□□□□ -0.59
TMEM254-207ENST00000463029 NLGN2Q8NFZ4 835 aa11.37□□□□□ -0.59
TMEM254-207ENST00000463029 PCGF6Q9BYE7 350 aa11.37□□□□□ -0.59
TMEM254-207ENST00000463029 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
TMEM254-207ENST00000463029 TIMELESSQ9UNS1 1208 aa11.37□□□□□ -0.59
TMEM254-207ENST00000463029 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
TMEM254-207ENST00000463029 ATMINO43313 823 aaPredicted RBP11.36□□□□□ -0.59
TMEM254-207ENST00000463029 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
TMEM254-207ENST00000463029 TUBGCP6Q96RT7 1819 aa11.35□□□□□ -0.59
TMEM254-207ENST00000463029 HMGB2P26583 209 aaKnown RBP11.35□□□□□ -0.59
TMEM254-207ENST00000463029 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
TMEM254-207ENST00000463029 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
TMEM254-207ENST00000463029 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
TMEM254-207ENST00000463029 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
TMEM254-207ENST00000463029 PIGBQ92521 554 aa11.34□□□□□ -0.59
TMEM254-207ENST00000463029 SMARCC1Q92922 1105 aaPredicted RBP11.34□□□□□ -0.59
TMEM254-207ENST00000463029 EYA1Q99502 592 aa11.34□□□□□ -0.59
TMEM254-207ENST00000463029 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
TMEM254-207ENST00000463029 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
TMEM254-207ENST00000463029 AK7Q96M32 723 aa11.33□□□□□ -0.6
TMEM254-207ENST00000463029 POLKQ9UBT6 870 aa11.33□□□□□ -0.6
TMEM254-207ENST00000463029 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
TMEM254-207ENST00000463029 C5P01031 1676 aa11.33□□□□□ -0.6
TMEM254-207ENST00000463029 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
TMEM254-207ENST00000463029 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
TMEM254-207ENST00000463029 GOLGB1Q14789 3259 aaKnown RBP11.32□□□□□ -0.6
TMEM254-207ENST00000463029 PHF14O94880 888 aa11.32□□□□□ -0.6
TMEM254-207ENST00000463029 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
TMEM254-207ENST00000463029 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
TMEM254-207ENST00000463029 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
TMEM254-207ENST00000463029 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
TMEM254-207ENST00000463029 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM254-207ENST00000463029 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
TMEM254-207ENST00000463029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM254-207ENST00000463029 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
TMEM254-207ENST00000463029 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 GRIN3BO60391 1043 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
TMEM254-207ENST00000463029 PHKG2P15735 406 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 SIK1P57059 783 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
TMEM254-207ENST00000463029 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
TMEM254-207ENST00000463029 SMIM5Q71RC9 77 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 IFNL2Q8IZJ0 200 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 CHD4Q14839 1912 aa11.3□□□□□ -0.6
TMEM254-207ENST00000463029 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
TMEM254-207ENST00000463029 TIE1P35590 1138 aa11.29□□□□□ -0.6
TMEM254-207ENST00000463029 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
TMEM254-207ENST00000463029 PANK3Q9H999 370 aa11.29□□□□□ -0.6
TMEM254-207ENST00000463029 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
TMEM254-207ENST00000463029 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
TMEM254-207ENST00000463029 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
TMEM254-207ENST00000463029 GNPATO15228 680 aa11.28□□□□□ -0.6
TMEM254-207ENST00000463029 ATP6V1AP38606 617 aa11.28□□□□□ -0.6
TMEM254-207ENST00000463029 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
TMEM254-207ENST00000463029 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
TMEM254-207ENST00000463029 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.61
TMEM254-207ENST00000463029 SSFA2P28290 1259 aa11.27□□□□□ -0.61
TMEM254-207ENST00000463029 ITPK1Q13572 414 aa11.27□□□□□ -0.61
TMEM254-207ENST00000463029 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
TMEM254-207ENST00000463029 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
TMEM254-207ENST00000463029 ITGB4P16144 1822 aa11.27□□□□□ -0.61
TMEM254-207ENST00000463029 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
TMEM254-207ENST00000463029 CCER1Q8TC90 406 aaPredicted RBP11.26□□□□□ -0.61
TMEM254-207ENST00000463029 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
TMEM254-207ENST00000463029 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
TMEM254-207ENST00000463029 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
TMEM254-207ENST00000463029 HSP90AB1P08238 724 aaKnown RBP11.25□□□□□ -0.61
TMEM254-207ENST00000463029 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
TMEM254-207ENST00000463029 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
TMEM254-207ENST00000463029 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
TMEM254-207ENST00000463029 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms