RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 COL19A1Q14993 1142 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 CC2D2BQ6DHV5 1058 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 TMC7Q7Z402 723 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 SAP130Q9H0E3 1048 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 OSBPL3Q9H4L5 887 aa5.99□□□□□ -1.45
GPNMB-205ENST00000463011 ZBTB24O43167 697 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-205ENST00000463011 P4HBP07237 508 aaKnown RBP5.98□□□□□ -1.45
GPNMB-205ENST00000463011 NPR3P17342 541 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 ERVK-9P63128 1117 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 AAMPQ13685 434 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 ARID5BQ14865 1188 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 TMC1Q8TDI8 760 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 RBCK1Q9BYM8 510 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 BCL11AQ9H165 835 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 TSPAN10Q9H1Z9 355 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-205ENST00000463011 CYLDQ9NQC7 956 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 TMPRSS4Q9NRS4 437 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 BRPF3Q9ULD4 1205 aa5.98□□□□□ -1.45
GPNMB-205ENST00000463011 A0A1W2PRU2 124 aa5.97□□□□□ -1.45
GPNMB-205ENST00000463011 NDUFB5O43674 189 aa5.97□□□□□ -1.45
GPNMB-205ENST00000463011 INHAP05111 366 aa5.97□□□□□ -1.45
GPNMB-205ENST00000463011 VARSP26640 1264 aaKnown RBP5.97□□□□□ -1.45
GPNMB-205ENST00000463011 TBCELQ5QJ74 424 aa5.97□□□□□ -1.45
GPNMB-205ENST00000463011 BACH2Q9BYV9 841 aa5.97□□□□□ -1.45
GPNMB-205ENST00000463011 PPP1R12BO60237 982 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-205ENST00000463011 SKOR1P84550 965 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 C16orf46Q6P387 395 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 DRC1Q96MC2 740 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 C8orf37Q96NL8 207 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 IRX2Q9BZI1 471 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-205ENST00000463011 ETNK1Q9HBU6 452 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.96□□□□□ -1.46
GPNMB-205ENST00000463011 CCDC87Q9NVE4 849 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 MAP4K5Q9Y4K4 846 aa5.96□□□□□ -1.46
GPNMB-205ENST00000463011 EIF1AXP47813 144 aaKnown RBP5.95□□□□□ -1.46
GPNMB-205ENST00000463011 EPHA4P54764 986 aa5.95□□□□□ -1.46
GPNMB-205ENST00000463011 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
GPNMB-205ENST00000463011 PLCB3Q01970 1234 aa5.95□□□□□ -1.46
GPNMB-205ENST00000463011 TRIM32Q13049 653 aa5.95□□□□□ -1.46
GPNMB-205ENST00000463011 COX20Q5RI15 118 aa5.95□□□□□ -1.46
GPNMB-205ENST00000463011 C9orf131Q5VYM1 1079 aa5.95□□□□□ -1.46
GPNMB-205ENST00000463011 PPP1R1BQ9UD71 204 aaPredicted RBP5.95□□□□□ -1.46
GPNMB-205ENST00000463011 WASLO00401 505 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-205ENST00000463011 TREHO43280 583 aa5.94□□□□□ -1.46
GPNMB-205ENST00000463011 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-205ENST00000463011 MAPK8P45983 427 aa5.94□□□□□ -1.46
GPNMB-205ENST00000463011 MRPL58Q14197 206 aaKnown RBP5.94□□□□□ -1.46
GPNMB-205ENST00000463011 NAALADL2Q58DX5 795 aa5.94□□□□□ -1.46
GPNMB-205ENST00000463011 SLC9A9Q8IVB4 645 aa5.94□□□□□ -1.46
GPNMB-205ENST00000463011 SREK1Q8WXA9 508 aaKnown RBP5.94□□□□□ -1.46
GPNMB-205ENST00000463011 FAM161BQ96MY7 647 aa5.94□□□□□ -1.46
GPNMB-205ENST00000463011 SLC4A9Q96Q91 983 aa5.94□□□□□ -1.46
GPNMB-205ENST00000463011 FZD6O60353 706 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 LDHBP07195 334 aaKnown RBP5.93□□□□□ -1.46
GPNMB-205ENST00000463011 FSHRP23945 695 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 XPCQ01831 940 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-205ENST00000463011 FMR1Q06787 632 aaKnown RBP eCLIP5.93□□□□□ -1.46
GPNMB-205ENST00000463011 ALKBH2Q6NS38 261 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 ZNF784Q8NCA9 323 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-205ENST00000463011 EHBP1Q8NDI1 1231 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 CITED4Q96RK1 184 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 C2orf49Q9BVC5 232 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-205ENST00000463011 RNF19AQ9NV58 838 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 STIM2Q9P246 746 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 PARP2Q9UGN5 583 aa5.93□□□□□ -1.46
GPNMB-205ENST00000463011 A6NJY4 79 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 TNFRSF10BO14763 440 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 SCAMP3O14828 347 aaKnown RBP5.92□□□□□ -1.46
GPNMB-205ENST00000463011 ZBTB39O15060 712 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 LILRA1O75019 489 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 GRM5P41594 1212 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 WNT7BP56706 349 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 HDLBPQ00341 1268 aaKnown RBP5.92□□□□□ -1.46
GPNMB-205ENST00000463011 FOXK2Q01167 660 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 DHX9Q08211 1270 aaKnown RBP5.92□□□□□ -1.46
GPNMB-205ENST00000463011 EHHADHQ08426 723 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 DSC3Q14574 896 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 PLA2G2CQ5R387 149 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 TRIM52Q96A61 297 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 DUSP9Q99956 384 aaKnown RBP5.92□□□□□ -1.46
GPNMB-205ENST00000463011 PRKD2Q9BZL6 878 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 RAB6BQ9NRW1 208 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 SCHIP1Q9P0W5 487 aaPredicted RBP5.92□□□□□ -1.46
GPNMB-205ENST00000463011 WWC3Q9ULE0 1092 aa5.92□□□□□ -1.46
GPNMB-205ENST00000463011 RNF223E7ERA6 249 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 GNRH1P01148 92 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 ADD1P35611 737 aaKnown RBP5.91□□□□□ -1.46
GPNMB-205ENST00000463011 SMTNP53814 917 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 MYT1Q01538 1121 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 ESCO1Q5FWF5 840 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 LDLRAD1Q5T700 205 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 PPP1R26Q5T8A7 1209 aaPredicted RBP5.91□□□□□ -1.46
GPNMB-205ENST00000463011 RC3H1Q5TC82 1133 aaKnown RBP5.91□□□□□ -1.46
GPNMB-205ENST00000463011 CYP2U1Q7Z449 544 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 TMEM87AQ8NBN3 555 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 NGLY1Q96IV0 654 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 DMRTB1Q96MA1 342 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 CDK15Q96Q40 435 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
GPNMB-205ENST00000463011 LRFN2Q9ULH4 789 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms