RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
SGCE-209ENST00000462731 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
SGCE-209ENST00000462731 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
SGCE-209ENST00000462731 PTCD2Q8WV60 388 aaKnown RBP8.28□□□□□ -1.08
SGCE-209ENST00000462731 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
SGCE-209ENST00000462731 TYW1Q9NV66 732 aaKnown RBP8.28□□□□□ -1.08
SGCE-209ENST00000462731 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
SGCE-209ENST00000462731 PRPF40AO75400 957 aaKnown RBP8.27□□□□□ -1.09
SGCE-209ENST00000462731 RHBDL3P58872 404 aa8.27□□□□□ -1.09
SGCE-209ENST00000462731 OCLNQ16625 522 aa8.27□□□□□ -1.09
SGCE-209ENST00000462731 ZFYVE27Q5T4F4 411 aa8.27□□□□□ -1.09
SGCE-209ENST00000462731 FAM174AQ8TBP5 190 aa8.27□□□□□ -1.09
SGCE-209ENST00000462731 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.09
SGCE-209ENST00000462731 PARP2Q9UGN5 583 aa8.27□□□□□ -1.09
SGCE-209ENST00000462731 RCCD1A6NED2 376 aa8.26□□□□□ -1.09
SGCE-209ENST00000462731 DDX11L8A8MPP1 907 aa8.26□□□□□ -1.09
SGCE-209ENST00000462731 NCOA4Q13772 614 aa8.26□□□□□ -1.09
SGCE-209ENST00000462731 STAG1Q8WVM7 1258 aa8.26□□□□□ -1.09
SGCE-209ENST00000462731 G3BP2Q9UN86 482 aaKnown RBP8.26□□□□□ -1.09
SGCE-209ENST00000462731 INPP5FQ9Y2H2 1132 aa8.26□□□□□ -1.09
SGCE-209ENST00000462731 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
SGCE-209ENST00000462731 PRC1O43663 620 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 PRMT3O60678 531 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 FMNL1O95466 1100 aaPredicted RBP8.25□□□□□ -1.09
SGCE-209ENST00000462731 PAX3P23760 479 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 BIRC2Q13490 618 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 MTMR2Q13614 643 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 TMC7Q7Z402 723 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 GTF3C2Q8WUA4 911 aaPredicted RBP8.25□□□□□ -1.09
SGCE-209ENST00000462731 TSC1Q92574 1164 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 VTI1BQ9UEU0 232 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 PRR12Q9ULL5 1215 aa8.25□□□□□ -1.09
SGCE-209ENST00000462731 PPP1R12AO14974 1030 aaPredicted RBP8.24□□□□□ -1.09
SGCE-209ENST00000462731 TREHO43280 583 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 DAB2P98082 770 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 PDE3BQ13370 1112 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 NR6A1Q15406 480 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 MCF2L2Q86YR7 1114 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 FMNL3Q8IVF7 1028 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 FAM161BQ96MY7 647 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 NAP1L5Q96NT1 182 aaPredicted RBP8.24□□□□□ -1.09
SGCE-209ENST00000462731 RPS6KC1Q96S38 1066 aa8.24□□□□□ -1.09
SGCE-209ENST00000462731 DNMT3AQ9Y6K1 912 aaPredicted RBP8.24□□□□□ -1.09
SGCE-209ENST00000462731 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
SGCE-209ENST00000462731 FGRP09769 529 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 PLEKHG4Q58EX7 1191 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 NBPF6Q5VWK0 638 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 CLEC4GQ6UXB4 293 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 VPS37DQ86XT2 251 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 NBPF4Q96M43 638 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 BSDC1Q9NW68 430 aaPredicted RBP8.23□□□□□ -1.09
SGCE-209ENST00000462731 PCDHGC3Q9UN70 934 aa8.23□□□□□ -1.09
SGCE-209ENST00000462731 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
SGCE-209ENST00000462731 PDGFRBP09619 1106 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 FBXO45P0C2W1 286 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 KCNC4Q03721 635 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 ZNF654Q8IZM8 581 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 JDP2Q8WYK2 163 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 MKL1Q969V6 931 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 RELTQ969Z4 430 aa8.22□□□□□ -1.09
SGCE-209ENST00000462731 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
SGCE-209ENST00000462731 LOC100996750A0A140TA64 210 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 ZBBXA8MT70 800 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 PSMD2Q13200 908 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 TRIM50Q86XT4 487 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 C8orf48Q96LL4 319 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 KRTAP4-6Q9BYQ5 205 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 PRKD2Q9BZL6 878 aa8.21□□□□□ -1.1
SGCE-209ENST00000462731 ATP1A2P50993 1020 aa8.2□□□□□ -1.1
SGCE-209ENST00000462731 SERINC3Q13530 473 aa8.2□□□□□ -1.1
SGCE-209ENST00000462731 CCSAPQ6IQ19 270 aaPredicted RBP8.2□□□□□ -1.1
SGCE-209ENST00000462731 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
SGCE-209ENST00000462731 GNL3LQ9NVN8 582 aaKnown RBP8.2□□□□□ -1.1
SGCE-209ENST00000462731 DDX41Q9UJV9 622 aaKnown RBP8.2□□□□□ -1.1
SGCE-209ENST00000462731 PNMA2Q9UL42 364 aa8.2□□□□□ -1.1
SGCE-209ENST00000462731 PRSS12P56730 875 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 AMPD3Q01432 767 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
SGCE-209ENST00000462731 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 SIX5Q8N196 739 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 SCYL1Q96KG9 808 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 CYLDQ9NQC7 956 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
SGCE-209ENST00000462731 COMMD10Q9Y6G5 202 aa8.19□□□□□ -1.1
SGCE-209ENST00000462731 NDUFB5O43674 189 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 CLDN10P78369 228 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 DSC3Q14574 896 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 EML3Q32P44 896 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 ODR4Q5SWX8 454 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 KRBA2Q6ZNG9 492 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 C11orf96Q7Z7L8 435 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
SGCE-209ENST00000462731 CITED4Q96RK1 184 aa8.18□□□□□ -1.1
SGCE-209ENST00000462731 EYA1Q99502 592 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms