RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
UBE4B-204ENST00000462658 Q6ZNB5 142 aa11.56□□□□□ -0.56
UBE4B-204ENST00000462658 MEIOBQ8N635 442 aa11.56□□□□□ -0.56
UBE4B-204ENST00000462658 KDF1Q8NAX2 398 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-204ENST00000462658 VRTNQ9H8Y1 702 aa11.56□□□□□ -0.56
UBE4B-204ENST00000462658 BMP1P13497 986 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
UBE4B-204ENST00000462658 RELBQ01201 579 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 AAASQ9NRG9 546 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 DACH1Q9UI36 760 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 PCDHGA11Q9Y5H2 935 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 ARHGEF11O15085 1522 aa11.55□□□□□ -0.56
UBE4B-204ENST00000462658 CLDN10P78369 228 aa11.54□□□□□ -0.56
UBE4B-204ENST00000462658 OGFOD1Q8N543 542 aa11.54□□□□□ -0.56
UBE4B-204ENST00000462658 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
UBE4B-204ENST00000462658 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
UBE4B-204ENST00000462658 SYNJ2O15056 1496 aa11.54□□□□□ -0.56
UBE4B-204ENST00000462658 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
UBE4B-204ENST00000462658 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
UBE4B-204ENST00000462658 RASA1P20936 1047 aa11.53□□□□□ -0.56
UBE4B-204ENST00000462658 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
UBE4B-204ENST00000462658 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
UBE4B-204ENST00000462658 ZNF395Q9H8N7 513 aaPredicted RBP11.53□□□□□ -0.56
UBE4B-204ENST00000462658 RAB6BQ9NRW1 208 aa11.53□□□□□ -0.56
UBE4B-204ENST00000462658 LCE2BO14633 110 aa11.52□□□□□ -0.57
UBE4B-204ENST00000462658 PSME1Q06323 249 aa11.52□□□□□ -0.57
UBE4B-204ENST00000462658 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-204ENST00000462658 TRIM46Q7Z4K8 759 aa11.52□□□□□ -0.57
UBE4B-204ENST00000462658 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
UBE4B-204ENST00000462658 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
UBE4B-204ENST00000462658 ZNF594Q96JF6 807 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-204ENST00000462658 ZBTB7BO15156 539 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-204ENST00000462658 PTGIRP43119 386 aa11.51□□□□□ -0.57
UBE4B-204ENST00000462658 C6orf118Q5T5N4 469 aa11.51□□□□□ -0.57
UBE4B-204ENST00000462658 MRPL14Q6P1L8 145 aaKnown RBP11.51□□□□□ -0.57
UBE4B-204ENST00000462658 LINC00528Q8N1L1 170 aa11.51□□□□□ -0.57
UBE4B-204ENST00000462658 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
UBE4B-204ENST00000462658 DNAAF2Q9NVR5 837 aaKnown RBP11.51□□□□□ -0.57
UBE4B-204ENST00000462658 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
UBE4B-204ENST00000462658 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L15C9J2P7 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L13C9JLJ4 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L12C9JPN9 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L11C9JVI0 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L21D6R901 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L18D6R9N7 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L22D6RA61 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L17D6RBQ6 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L19D6RCP7 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L20D6RJB6 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 USP17L24Q0WX57 530 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
UBE4B-204ENST00000462658 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
UBE4B-204ENST00000462658 TSEN34Q9BSV6 310 aaKnown RBP11.49□□□□□ -0.57
UBE4B-204ENST00000462658 ETNK1Q9HBU6 452 aa11.49□□□□□ -0.57
UBE4B-204ENST00000462658 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 BMP2P12643 396 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 SCNN1DP51172 638 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 PTK7Q13308 1070 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 GRIN2AQ12879 1464 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 ERCC6L2Q5T890 1561 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 CUL7Q14999 1698 aa11.48□□□□□ -0.57
UBE4B-204ENST00000462658 NUP160Q12769 1436 aa11.47□□□□□ -0.57
UBE4B-204ENST00000462658 MEN1O00255 615 aa11.47□□□□□ -0.57
UBE4B-204ENST00000462658 UPP2O95045 317 aa11.47□□□□□ -0.57
UBE4B-204ENST00000462658 GNRH1P01148 92 aa11.47□□□□□ -0.57
UBE4B-204ENST00000462658 GDF10P55107 478 aa11.47□□□□□ -0.57
UBE4B-204ENST00000462658 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
UBE4B-204ENST00000462658 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
UBE4B-204ENST00000462658 FAM196BA6NMK8 535 aa11.46□□□□□ -0.57
UBE4B-204ENST00000462658 TMEM229AB2RXF0 380 aa11.46□□□□□ -0.57
UBE4B-204ENST00000462658 IL2RAP01589 272 aa11.46□□□□□ -0.57
UBE4B-204ENST00000462658 LARGE2Q8N3Y3 721 aa11.46□□□□□ -0.57
UBE4B-204ENST00000462658 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
UBE4B-204ENST00000462658 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
UBE4B-204ENST00000462658 SFI1A8K8P3 1242 aa11.45□□□□□ -0.58
UBE4B-204ENST00000462658 DKK1O94907 266 aa11.45□□□□□ -0.58
UBE4B-204ENST00000462658 DPYDQ12882 1025 aa11.45□□□□□ -0.58
UBE4B-204ENST00000462658 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-204ENST00000462658 ZFP42Q96MM3 310 aa11.45□□□□□ -0.58
UBE4B-204ENST00000462658 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
UBE4B-204ENST00000462658 SPINT1O43278 529 aa11.44□□□□□ -0.58
UBE4B-204ENST00000462658 PPP1R15AO75807 674 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-204ENST00000462658 ATG7O95352 703 aa11.44□□□□□ -0.58
UBE4B-204ENST00000462658 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-204ENST00000462658 RANGAP1P46060 587 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-204ENST00000462658 SCARF1Q14162 830 aa11.44□□□□□ -0.58
UBE4B-204ENST00000462658 SIX5Q8N196 739 aa11.44□□□□□ -0.58
UBE4B-204ENST00000462658 ZMIZ1Q9ULJ6 1067 aa11.44□□□□□ -0.58
UBE4B-204ENST00000462658 NOVA2Q9UNW9 492 aaKnown RBP11.44□□□□□ -0.58
UBE4B-204ENST00000462658 INHAP05111 366 aa11.43□□□□□ -0.58
UBE4B-204ENST00000462658 CLN3Q13286 438 aa11.43□□□□□ -0.58
UBE4B-204ENST00000462658 ANKMY2Q8IV38 441 aa11.43□□□□□ -0.58
UBE4B-204ENST00000462658 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms