RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CUL4AQ13619 759 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 SLC4A10Q6U841 1118 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 MCM10Q7L590 875 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 MTERF4Q7Z6M4 381 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 AEBP1Q8IUX7 1158 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 FAM184AQ8NB25 1140 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 INTS4Q96HW7 963 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 TMX3Q96JJ7 454 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 PDLIM2Q96JY6 352 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ESYT1Q9BSJ8 1104 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 LRRCC1Q9C099 1032 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 SRCIN1Q9C0H9 1055 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ZMYND15Q9H091 742 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 RBSNQ9H1K0 784 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ANO2Q9NQ90 1003 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 RBM27Q9P2N5 1060 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ZRANB1Q9UGI0 708 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ZKSCAN5Q9Y2L8 839 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 R3HCC1Q9Y3T6 440 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 CRB1P82279 1406 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 NRKQ7Z2Y5 1582 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 METP08581 1390 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 CPS1P31327 1500 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 AGLP35573 1532 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 KIF20BQ96Q89 1820 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 TRIM6-TRIM34B2RNG4 842 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 LETM1O95202 739 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-204ENST00000462604 CHMLP26374 656 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 KIAA2012Q0VF49 1180 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 PKP1Q13835 747 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 KRT24Q2M2I5 525 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 FOXD4L5Q5VV16 416 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-204ENST00000462604 CCDC30Q5VVM6 783 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 SASS6Q6UVJ0 657 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 TXNDC2Q86VQ3 553 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 FOXD4L4Q8WXT5 416 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-204ENST00000462604 NECTIN2Q92692 538 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 IL17RAQ96F46 866 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 ESF1Q9H501 851 aaKnown RBP4.26□□□□□ -1.73
COL8A1-204ENST00000462604 STAP2Q9UGK3 403 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 OVOS2A0A0J9YW53 1432 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 OVOS2Q6IE36 1432 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 SPATA31D1Q6ZQQ2 1576 aa4.26□□□□□ -1.73
COL8A1-204ENST00000462604 TTC21AQ8NDW8 1320 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 UQCRHLA0A096LP55 91 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 PLEKHG3A1L390 1219 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 DYNC1I1O14576 645 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 HTATSF1O43719 755 aaKnown RBP4.25□□□□□ -1.73
COL8A1-204ENST00000462604 RAB11FIP3O75154 756 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 UQCRHP07919 91 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 ATP8B2P98198 1209 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 FLIIQ13045 1269 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 FKBP5Q13451 457 aaPredicted RBP4.25□□□□□ -1.73
COL8A1-204ENST00000462604 UVSSAQ2YD98 709 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 CCDC183Q5T5S1 534 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 NOL8Q76FK4 1167 aaKnown RBP4.25□□□□□ -1.73
COL8A1-204ENST00000462604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.25□□□□□ -1.73
COL8A1-204ENST00000462604 RILPL2Q969X0 211 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 PKNOX2Q96KN3 472 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 CHMP4AQ9BY43 222 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 TMEM63CQ9P1W3 806 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 EXOC6BQ9Y2D4 811 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 ZDHHC9Q9Y397 364 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 ATP6V1DQ9Y5K8 247 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 SBNO1A3KN83 1393 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 FLT4P35916 1363 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 USP31Q70CQ4 1352 aa4.25□□□□□ -1.73
COL8A1-204ENST00000462604 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 ACEP12821 1306 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 SALL3Q9BXA9 1300 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 PRR36Q9H6K5 1346 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 USP6P35125 1406 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 SPDYE4A6NLX3 237 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 F6X3S4 739 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 TPM3P06753 285 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 UBTFL1P0CB47 393 aaPredicted RBP4.24□□□□□ -1.73
COL8A1-204ENST00000462604 AMPHP49418 695 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 HMGN5P82970 282 aaKnown RBP4.24□□□□□ -1.73
COL8A1-204ENST00000462604 XPCQ01831 940 aaPredicted RBP4.24□□□□□ -1.73
COL8A1-204ENST00000462604 HSP90AB4PQ58FF6 505 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 TSHZ3Q63HK5 1081 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 G2E3Q7L622 706 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 CNTROBQ8N137 903 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 TMEM87AQ8NBN3 555 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 RNF214Q8ND24 703 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 GPATCH3Q96I76 525 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 BABAM1Q9NWV8 329 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 FAM13BQ9NYF5 915 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.24□□□□□ -1.73
COL8A1-204ENST00000462604 TNRQ92752 1358 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 RIMBP3CA6NJZ7 1639 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 RIMBP3BA6NNM3 1639 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 RIMBP3Q9UFD9 1639 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 RICTORQ6R327 1708 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 KNDC1Q76NI1 1749 aa4.24□□□□□ -1.73
COL8A1-204ENST00000462604 MAP3K19Q56UN5 1328 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 IGSF1Q8N6C5 1336 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 RAD50Q92878 1312 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 NCKAP5LQ9HCH0 1330 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms