RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 USP17L13C9JLJ4 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L12C9JPN9 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L11C9JVI0 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L21D6R901 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L18D6R9N7 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L22D6RA61 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L17D6RBQ6 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L19D6RCP7 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L20D6RJB6 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
CALD1-213ENST00000462181 BACH1O14867 736 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 SNRPBP14678 240 aaKnown RBP10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L24Q0WX57 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 PTK7Q13308 1070 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 FOXD4L5Q5VV16 416 aaPredicted RBP10.79□□□□□ -0.68
CALD1-213ENST00000462181 SIX5Q8N196 739 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
CALD1-213ENST00000462181 RNF217Q8TC41 542 aa10.78□□□□□ -0.68
CALD1-213ENST00000462181 DNMT3LQ9UJW3 386 aa10.78□□□□□ -0.68
CALD1-213ENST00000462181 SOBPA7XYQ1 873 aa10.77□□□□□ -0.69
CALD1-213ENST00000462181 GTF2E1P29083 439 aaPredicted RBP10.77□□□□□ -0.69
CALD1-213ENST00000462181 TLR1Q15399 786 aa10.77□□□□□ -0.69
CALD1-213ENST00000462181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.77□□□□□ -0.69
CALD1-213ENST00000462181 LYSMD3Q7Z3D4 306 aa10.77□□□□□ -0.69
CALD1-213ENST00000462181 ZSCAN10Q96SZ4 725 aaPredicted RBP10.77□□□□□ -0.69
CALD1-213ENST00000462181 ZNF358Q9NW07 568 aa10.77□□□□□ -0.69
CALD1-213ENST00000462181 HRH3Q9Y5N1 445 aa10.77□□□□□ -0.69
CALD1-213ENST00000462181 SMTNP53814 917 aa10.76□□□□□ -0.69
CALD1-213ENST00000462181 DPYDQ12882 1025 aa10.76□□□□□ -0.69
CALD1-213ENST00000462181 PRICKLE2Q7Z3G6 844 aa10.76□□□□□ -0.69
CALD1-213ENST00000462181 ANKMY2Q8IV38 441 aa10.76□□□□□ -0.69
CALD1-213ENST00000462181 SLC4A9Q96Q91 983 aa10.76□□□□□ -0.69
CALD1-213ENST00000462181 GRIP2Q9C0E4 1043 aa10.76□□□□□ -0.69
CALD1-213ENST00000462181 SFI1A8K8P3 1242 aa10.75□□□□□ -0.69
CALD1-213ENST00000462181 PPP1R15AO75807 674 aaPredicted RBP10.75□□□□□ -0.69
CALD1-213ENST00000462181 SEC13P55735 322 aa10.75□□□□□ -0.69
CALD1-213ENST00000462181 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
CALD1-213ENST00000462181 A6NJY4 79 aa10.74□□□□□ -0.69
CALD1-213ENST00000462181 DKK1O94907 266 aa10.74□□□□□ -0.69
CALD1-213ENST00000462181 ATG7O95352 703 aa10.74□□□□□ -0.69
CALD1-213ENST00000462181 TMEM214Q6NUQ4 689 aaKnown RBP10.74□□□□□ -0.69
CALD1-213ENST00000462181 FAM200AQ8TCP9 573 aa10.74□□□□□ -0.69
CALD1-213ENST00000462181 FHDC1Q9C0D6 1143 aaPredicted RBP10.74□□□□□ -0.69
CALD1-213ENST00000462181 NOVA2Q9UNW9 492 aaKnown RBP10.74□□□□□ -0.69
CALD1-213ENST00000462181 M0R2N6 131 aa10.72□□□□□ -0.69
CALD1-213ENST00000462181 ELOAQ14241 798 aaKnown RBP10.72□□□□□ -0.69
CALD1-213ENST00000462181 POU4F2Q12837 409 aa10.71□□□□□ -0.69
CALD1-213ENST00000462181 MTFR1Q15390 333 aa10.71□□□□□ -0.69
CALD1-213ENST00000462181 GNASQ5JWF2 1037 aa10.71□□□□□ -0.69
CALD1-213ENST00000462181 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
CALD1-213ENST00000462181 TNS4Q8IZW8 715 aa10.71□□□□□ -0.69
CALD1-213ENST00000462181 TSEN2Q8NCE0 465 aaKnown RBP10.71□□□□□ -0.69
CALD1-213ENST00000462181 ARXQ96QS3 562 aa10.71□□□□□ -0.69
CALD1-213ENST00000462181 HINFPQ9BQA5 517 aa10.71□□□□□ -0.69
CALD1-213ENST00000462181 SPATA31C2B4DYI2 1134 aa10.7□□□□□ -0.7
CALD1-213ENST00000462181 CDK2AP1O14519 115 aa10.7□□□□□ -0.7
CALD1-213ENST00000462181 RHOQP17081 205 aa10.7□□□□□ -0.7
CALD1-213ENST00000462181 TAS1R3Q7RTX0 852 aa10.7□□□□□ -0.7
CALD1-213ENST00000462181 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
CALD1-213ENST00000462181 RHBDD1Q8TEB9 315 aa10.69□□□□□ -0.7
CALD1-213ENST00000462181 PTSQ03393 145 aa10.68□□□□□ -0.7
CALD1-213ENST00000462181 NBPF10Q6P3W6 841 aaKnown RBP10.68□□□□□ -0.7
CALD1-213ENST00000462181 SCHIP1Q9P0W5 487 aaPredicted RBP10.68□□□□□ -0.7
CALD1-213ENST00000462181 PHKA2P46019 1235 aa10.67□□□□□ -0.7
CALD1-213ENST00000462181 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
CALD1-213ENST00000462181 ZMIZ1Q9ULJ6 1067 aa10.67□□□□□ -0.7
CALD1-213ENST00000462181 EPHA4P54764 986 aa10.66□□□□□ -0.7
CALD1-213ENST00000462181 C4orf17Q53FE4 359 aa10.66□□□□□ -0.7
CALD1-213ENST00000462181 NIFKQ9BYG3 293 aaKnown RBP10.66□□□□□ -0.7
CALD1-213ENST00000462181 CABP1Q9NZU7 370 aa10.66□□□□□ -0.7
CALD1-213ENST00000462181 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.7
CALD1-213ENST00000462181 STK32AQ8WU08 396 aa10.65□□□□□ -0.7
CALD1-213ENST00000462181 TIMMDC1Q9NPL8 285 aa10.65□□□□□ -0.7
CALD1-213ENST00000462181 IQSEC3Q9UPP2 1182 aaPredicted RBP10.65□□□□□ -0.7
CALD1-213ENST00000462181 LGR5O75473 907 aa10.64□□□□□ -0.71
CALD1-213ENST00000462181 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
CALD1-213ENST00000462181 FOXK2Q01167 660 aa10.64□□□□□ -0.71
CALD1-213ENST00000462181 TBCELQ5QJ74 424 aa10.64□□□□□ -0.71
CALD1-213ENST00000462181 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
CALD1-213ENST00000462181 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
CALD1-213ENST00000462181 SLC35F4A4IF30 521 aa10.63□□□□□ -0.71
CALD1-213ENST00000462181 SWI5Q1ZZU3 235 aa10.63□□□□□ -0.71
CALD1-213ENST00000462181 TMEM164Q5U3C3 297 aa10.63□□□□□ -0.71
CALD1-213ENST00000462181 NXF1Q9UBU9 619 aaKnown RBP10.63□□□□□ -0.71
CALD1-213ENST00000462181 CHMP3Q9Y3E7 222 aa10.63□□□□□ -0.71
CALD1-213ENST00000462181 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
CALD1-213ENST00000462181 PLA2G4AP47712 749 aa10.62□□□□□ -0.71
CALD1-213ENST00000462181 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
CALD1-213ENST00000462181 SCG3Q8WXD2 468 aaKnown RBP10.62□□□□□ -0.71
CALD1-213ENST00000462181 DYRK1BQ9Y463 629 aa10.62□□□□□ -0.71
CALD1-213ENST00000462181 SENP3-EIF4A1A0A087X0R7 540 aa10.61□□□□□ -0.71
CALD1-213ENST00000462181 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
CALD1-213ENST00000462181 AIDAQ96BJ3 306 aa10.61□□□□□ -0.71
CALD1-213ENST00000462181 GAS2L1Q99501 681 aaPredicted RBP10.61□□□□□ -0.71
CALD1-213ENST00000462181 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
CALD1-213ENST00000462181 PPP1R12BO60237 982 aaPredicted RBP10.6□□□□□ -0.71
CALD1-213ENST00000462181 NOS2P35228 1153 aa10.6□□□□□ -0.71
CALD1-213ENST00000462181 PSMA6P60900 246 aaKnown RBP10.6□□□□□ -0.71
CALD1-213ENST00000462181 TEAD4Q15561 434 aa10.6□□□□□ -0.71
CALD1-213ENST00000462181 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms