RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 TXNDC2Q86VQ3 553 aa7.23□□□□□ -1.25
FN1-215ENST00000461974 STAG2Q8N3U4 1231 aa7.23□□□□□ -1.25
FN1-215ENST00000461974 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
FN1-215ENST00000461974 XAGE2Q96GT9 111 aa7.23□□□□□ -1.25
FN1-215ENST00000461974 ESYT1Q9BSJ8 1104 aa7.23□□□□□ -1.25
FN1-215ENST00000461974 FOXO3O43524 673 aa7.22□□□□□ -1.25
FN1-215ENST00000461974 PTGIRP43119 386 aa7.22□□□□□ -1.25
FN1-215ENST00000461974 FOXK2Q01167 660 aa7.22□□□□□ -1.25
FN1-215ENST00000461974 POTEAQ6S8J7 498 aa7.22□□□□□ -1.25
FN1-215ENST00000461974 AEBP1Q8IUX7 1158 aa7.22□□□□□ -1.25
FN1-215ENST00000461974 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
FN1-215ENST00000461974 IL2RAP01589 272 aa7.21□□□□□ -1.26
FN1-215ENST00000461974 ARID4AP29374 1257 aaPredicted RBP7.21□□□□□ -1.26
FN1-215ENST00000461974 GPC1P35052 558 aa7.21□□□□□ -1.26
FN1-215ENST00000461974 NBPF15Q8N660 670 aa7.21□□□□□ -1.26
FN1-215ENST00000461974 ZFAND3Q9H8U3 227 aa7.21□□□□□ -1.26
FN1-215ENST00000461974 ARHGEF10LQ9HCE6 1279 aa7.21□□□□□ -1.26
FN1-215ENST00000461974 SCHIP1Q9P0W5 487 aaPredicted RBP7.21□□□□□ -1.26
FN1-215ENST00000461974 MTMR7Q9Y216 660 aa7.21□□□□□ -1.26
FN1-215ENST00000461974 A6NJY4 79 aa7.2□□□□□ -1.26
FN1-215ENST00000461974 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
FN1-215ENST00000461974 SMTNP53814 917 aa7.2□□□□□ -1.26
FN1-215ENST00000461974 CBLBQ13191 982 aa7.2□□□□□ -1.26
FN1-215ENST00000461974 CTC1Q2NKJ3 1217 aa7.2□□□□□ -1.26
FN1-215ENST00000461974 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
FN1-215ENST00000461974 CNKSR1Q969H4 720 aa7.2□□□□□ -1.26
FN1-215ENST00000461974 TSEN34Q9BSV6 310 aaKnown RBP7.2□□□□□ -1.26
FN1-215ENST00000461974 A0A1W2PRU2 124 aa7.19□□□□□ -1.26
FN1-215ENST00000461974 PTCD1O75127 700 aaKnown RBP7.19□□□□□ -1.26
FN1-215ENST00000461974 CRIPAKQ8N1N5 446 aa7.19□□□□□ -1.26
FN1-215ENST00000461974 HPS1Q92902 700 aa7.19□□□□□ -1.26
FN1-215ENST00000461974 HINFPQ9BQA5 517 aa7.19□□□□□ -1.26
FN1-215ENST00000461974 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
FN1-215ENST00000461974 IQSEC3Q9UPP2 1182 aaPredicted RBP7.19□□□□□ -1.26
FN1-215ENST00000461974 PDZRN3Q9UPQ7 1066 aa7.19□□□□□ -1.26
FN1-215ENST00000461974 CDK2AP1O14519 115 aa7.18□□□□□ -1.26
FN1-215ENST00000461974 SPINT1O43278 529 aa7.18□□□□□ -1.26
FN1-215ENST00000461974 PRMT3O60678 531 aa7.18□□□□□ -1.26
FN1-215ENST00000461974 HIRAP54198 1017 aaPredicted RBP7.18□□□□□ -1.26
FN1-215ENST00000461974 RAB6BQ9NRW1 208 aa7.18□□□□□ -1.26
FN1-215ENST00000461974 EGFL7Q9UHF1 273 aa7.18□□□□□ -1.26
FN1-215ENST00000461974 C21orf2O43822 256 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 PSMA6P60900 246 aaKnown RBP7.17□□□□□ -1.26
FN1-215ENST00000461974 LAPTM4AQ15012 233 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 TLR1Q15399 786 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
FN1-215ENST00000461974 TNS4Q8IZW8 715 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 ZNF295-AS1Q8N0V1 137 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
FN1-215ENST00000461974 PODXL2Q9NZ53 605 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 IVNS1ABPQ9Y6Y0 642 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 ATAD2Q6PL18 1390 aa7.17□□□□□ -1.26
FN1-215ENST00000461974 NRG2O14511 850 aaPredicted RBP7.16□□□□□ -1.26
FN1-215ENST00000461974 CAPN5O15484 640 aaPredicted RBP7.16□□□□□ -1.26
FN1-215ENST00000461974 STAU1O95793 577 aaKnown RBP7.16□□□□□ -1.26
FN1-215ENST00000461974 RNF144AP50876 292 aaPredicted RBP7.16□□□□□ -1.26
FN1-215ENST00000461974 FKBP5Q13451 457 aaPredicted RBP7.16□□□□□ -1.26
FN1-215ENST00000461974 SND1Q7KZF4 910 aaKnown RBP eCLIP7.16□□□□□ -1.262e-6■■□□□ 12.4
FN1-215ENST00000461974 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
FN1-215ENST00000461974 LINC00528Q8N1L1 170 aa7.16□□□□□ -1.26
FN1-215ENST00000461974 SERTAD1Q9UHV2 236 aa7.16□□□□□ -1.26
FN1-215ENST00000461974 DGAT1O75907 488 aa7.15□□□□□ -1.26
FN1-215ENST00000461974 UPP2O95045 317 aa7.15□□□□□ -1.26
FN1-215ENST00000461974 CENPCQ03188 943 aa7.15□□□□□ -1.26
FN1-215ENST00000461974 PRIMPOLQ96LW4 560 aa7.15□□□□□ -1.26
FN1-215ENST00000461974 NLRP3Q96P20 1036 aa7.15□□□□□ -1.26
FN1-215ENST00000461974 C2orf49Q9BVC5 232 aaPredicted RBP7.15□□□□□ -1.26
FN1-215ENST00000461974 SPATA31C2B4DYI2 1134 aa7.14□□□□□ -1.27
FN1-215ENST00000461974 RELBQ01201 579 aa7.14□□□□□ -1.27
FN1-215ENST00000461974 TEAD4Q15561 434 aa7.14□□□□□ -1.27
FN1-215ENST00000461974 RHBDD1Q8TEB9 315 aa7.14□□□□□ -1.27
FN1-215ENST00000461974 SCG3Q8WXD2 468 aaKnown RBP7.14□□□□□ -1.27
FN1-215ENST00000461974 AGBL1Q96MI9 1066 aa7.14□□□□□ -1.27
FN1-215ENST00000461974 GRIP2Q9C0E4 1043 aa7.14□□□□□ -1.27
FN1-215ENST00000461974 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.14□□□□□ -1.27
FN1-215ENST00000461974 FAM187AA6NFU0 413 aa7.13□□□□□ -1.27
FN1-215ENST00000461974 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
FN1-215ENST00000461974 MRPL14Q6P1L8 145 aaKnown RBP7.13□□□□□ -1.27
FN1-215ENST00000461974 MYO19Q96H55 970 aa7.13□□□□□ -1.27
FN1-215ENST00000461974 ZSCAN10Q96SZ4 725 aaPredicted RBP7.13□□□□□ -1.27
FN1-215ENST00000461974 CHMP3Q9Y3E7 222 aa7.13□□□□□ -1.27
FN1-215ENST00000461974 CCDC9Q9Y3X0 531 aaKnown RBP7.13□□□□□ -1.27
FN1-215ENST00000461974 SOWAHDA6NJG2 315 aa7.12□□□□□ -1.27
FN1-215ENST00000461974 MEN1O00255 615 aa7.12□□□□□ -1.27
FN1-215ENST00000461974 EML1O00423 815 aa7.12□□□□□ -1.27
FN1-215ENST00000461974 PPP1R12BO60237 982 aaPredicted RBP7.12□□□□□ -1.27
FN1-215ENST00000461974 SF3B2Q13435 895 aaKnown RBP7.12□□□□□ -1.27
FN1-215ENST00000461974 TMCO4Q5TGY1 634 aa7.12□□□□□ -1.27
FN1-215ENST00000461974 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
FN1-215ENST00000461974 NPR3P17342 541 aa7.11□□□□□ -1.27
FN1-215ENST00000461974 GTF2E1P29083 439 aaPredicted RBP7.11□□□□□ -1.27
FN1-215ENST00000461974 FOXD4L5Q5VV16 416 aaPredicted RBP7.11□□□□□ -1.27
FN1-215ENST00000461974 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
FN1-215ENST00000461974 NIFKQ9BYG3 293 aaKnown RBP7.11□□□□□ -1.27
FN1-215ENST00000461974 GPC6Q9Y625 555 aaPredicted RBP7.11□□□□□ -1.27
FN1-215ENST00000461974 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
FN1-215ENST00000461974 SERTM1A2A2V5 107 aa7.1□□□□□ -1.27
FN1-215ENST00000461974 NOS2P35228 1153 aa7.1□□□□□ -1.27
FN1-215ENST00000461974 SERPINB4P48594 390 aa7.1□□□□□ -1.27
FN1-215ENST00000461974 SCARF1Q14162 830 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms