RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 PIM2Q9P1W9 311 aa10.42□□□□□ -0.74
TRAPPC10-205ENST00000461889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
TRAPPC10-205ENST00000461889 MMP10P09238 476 aa10.41□□□□□ -0.74
TRAPPC10-205ENST00000461889 SSFA2P28290 1259 aa10.41□□□□□ -0.74
TRAPPC10-205ENST00000461889 SMIM5Q71RC9 77 aa10.41□□□□□ -0.74
TRAPPC10-205ENST00000461889 CDK19Q9BWU1 502 aa10.41□□□□□ -0.74
TRAPPC10-205ENST00000461889 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.74
TRAPPC10-205ENST00000461889 WDR33Q9C0J8 1336 aaKnown RBP10.4□□□□□ -0.74
TRAPPC10-205ENST00000461889 DEFB115Q30KQ5 88 aa10.4□□□□□ -0.74
TRAPPC10-205ENST00000461889 DALRD3Q5D0E6 543 aaKnown RBP10.4□□□□□ -0.74
TRAPPC10-205ENST00000461889 A0A0C4DFX4 3053 aa10.39□□□□□ -0.75
TRAPPC10-205ENST00000461889 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
TRAPPC10-205ENST00000461889 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
TRAPPC10-205ENST00000461889 AK7Q96M32 723 aa10.39□□□□□ -0.75
TRAPPC10-205ENST00000461889 BEGAINQ9BUH8 593 aa10.39□□□□□ -0.75
TRAPPC10-205ENST00000461889 THSD7BQ9C0I4 1608 aa10.39□□□□□ -0.75
TRAPPC10-205ENST00000461889 DOT1LQ8TEK3 1739 aa10.38□□□□□ -0.75
TRAPPC10-205ENST00000461889 PITPNM2Q9BZ72 1349 aa10.38□□□□□ -0.75
TRAPPC10-205ENST00000461889 LMNB1P20700 586 aa10.38□□□□□ -0.75
TRAPPC10-205ENST00000461889 NLRP2Q9NX02 1062 aa10.38□□□□□ -0.75
TRAPPC10-205ENST00000461889 DGKZQ13574 1117 aa10.37□□□□□ -0.75
TRAPPC10-205ENST00000461889 DPY19L2Q6NUT2 758 aa10.37□□□□□ -0.75
TRAPPC10-205ENST00000461889 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
TRAPPC10-205ENST00000461889 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
TRAPPC10-205ENST00000461889 C19orf67A6NJJ6 358 aa10.36□□□□□ -0.75
TRAPPC10-205ENST00000461889 PHF14O94880 888 aa10.36□□□□□ -0.75
TRAPPC10-205ENST00000461889 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC10-205ENST00000461889 FXR1P51114 621 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRAPPC10-205ENST00000461889 CA12O43570 354 aa10.35□□□□□ -0.75
TRAPPC10-205ENST00000461889 SOX10P56693 466 aa10.35□□□□□ -0.75
TRAPPC10-205ENST00000461889 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
TRAPPC10-205ENST00000461889 NBPF15Q8N660 670 aa10.35□□□□□ -0.75
TRAPPC10-205ENST00000461889 NFAT5O94916 1531 aa10.34□□□□□ -0.75
TRAPPC10-205ENST00000461889 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
TRAPPC10-205ENST00000461889 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
TRAPPC10-205ENST00000461889 LDHDQ86WU2 507 aa10.34□□□□□ -0.75
TRAPPC10-205ENST00000461889 LTBP1Q14766 1721 aa10.33□□□□□ -0.76
TRAPPC10-205ENST00000461889 RASSF7Q02833 373 aa10.33□□□□□ -0.76
TRAPPC10-205ENST00000461889 PALLDQ8WX93 1383 aa10.33□□□□□ -0.76
TRAPPC10-205ENST00000461889 CASP8AP2Q9UKL3 1982 aa10.33□□□□□ -0.76
TRAPPC10-205ENST00000461889 C4AP0C0L4 1744 aa10.33□□□□□ -0.76
TRAPPC10-205ENST00000461889 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
TRAPPC10-205ENST00000461889 ADAMTS7Q9UKP4 1686 aa10.32□□□□□ -0.76
TRAPPC10-205ENST00000461889 ECE1P42892 770 aa10.31□□□□□ -0.76
TRAPPC10-205ENST00000461889 TMF1P82094 1093 aa10.31□□□□□ -0.76
TRAPPC10-205ENST00000461889 SLC17A8Q8NDX2 589 aa10.31□□□□□ -0.76
TRAPPC10-205ENST00000461889 GPR101Q96P66 508 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC10-205ENST00000461889 MAP2K2P36507 400 aa10.3□□□□□ -0.76
TRAPPC10-205ENST00000461889 ITGAEP38570 1179 aa10.3□□□□□ -0.76
TRAPPC10-205ENST00000461889 CAPNS2Q96L46 248 aa10.3□□□□□ -0.76
TRAPPC10-205ENST00000461889 TSKSQ9UJT2 592 aa10.3□□□□□ -0.76
TRAPPC10-205ENST00000461889 ZCRB1Q8TBF4 217 aaKnown RBP10.29□□□□□ -0.76
TRAPPC10-205ENST00000461889 ANKRD24Q8TF21 1146 aa10.29□□□□□ -0.76
TRAPPC10-205ENST00000461889 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC10-205ENST00000461889 PARP3Q9Y6F1 533 aa10.29□□□□□ -0.76
TRAPPC10-205ENST00000461889 SOX12O15370 315 aa10.28□□□□□ -0.76
TRAPPC10-205ENST00000461889 CCDC88AQ3V6T2 1871 aa10.27□□□□□ -0.76
TRAPPC10-205ENST00000461889 IQCA1LA6NCM1 817 aa10.27□□□□□ -0.77
TRAPPC10-205ENST00000461889 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
TRAPPC10-205ENST00000461889 ABT1Q9ULW3 272 aaKnown RBP10.27□□□□□ -0.77
TRAPPC10-205ENST00000461889 GNPATO15228 680 aa10.26□□□□□ -0.77
TRAPPC10-205ENST00000461889 TAF1DQ9H5J8 278 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC10-205ENST00000461889 SZT2Q5T011 3432 aa10.26□□□□□ -0.77
TRAPPC10-205ENST00000461889 TTC21BQ7Z4L5 1316 aa10.26□□□□□ -0.77
TRAPPC10-205ENST00000461889 TTC21AQ8NDW8 1320 aa10.26□□□□□ -0.77
TRAPPC10-205ENST00000461889 SCN4AP35499 1836 aa10.26□□□□□ -0.77
TRAPPC10-205ENST00000461889 DICER1Q9UPY3 1922 aaKnown RBP10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 NFKBIEO00221 500 aa10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 GYS1P13807 737 aa10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 CHRNA5P30532 468 aa10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 CABP1Q9NZU7 370 aa10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 MAP2P11137 1827 aaKnown RBP10.25□□□□□ -0.77
TRAPPC10-205ENST00000461889 ADAMTSL1Q8N6G6 1762 aa10.24□□□□□ -0.77
TRAPPC10-205ENST00000461889 POTEMA6NI47 508 aa10.24□□□□□ -0.77
TRAPPC10-205ENST00000461889 DDNO94850 711 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC10-205ENST00000461889 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC10-205ENST00000461889 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
TRAPPC10-205ENST00000461889 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC10-205ENST00000461889 FAM208AQ9UK61 1670 aaKnown RBP10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 LOC102724428A0A0B4J2F2 783 aa10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 SIK1P57059 783 aa10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 SRPK2P78362 688 aaKnown RBP10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 CYP4F22Q6NT55 531 aa10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC10-205ENST00000461889 PRKAR2AP13861 404 aaKnown RBP10.22□□□□□ -0.77
TRAPPC10-205ENST00000461889 MPRIPQ6WCQ1 1025 aa10.22□□□□□ -0.77
TRAPPC10-205ENST00000461889 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
TRAPPC10-205ENST00000461889 DDX21Q9NR30 783 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRAPPC10-205ENST00000461889 RTCBQ9Y3I0 505 aaKnown RBP10.21□□□□□ -0.77
TRAPPC10-205ENST00000461889 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.78
TRAPPC10-205ENST00000461889 MEGF6O75095 1541 aa10.21□□□□□ -0.78
TRAPPC10-205ENST00000461889 COL6A3P12111 3177 aa10.21□□□□□ -0.78
TRAPPC10-205ENST00000461889 AOC2O75106 756 aa10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 LTN1O94822 1766 aa10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 ITPK1Q13572 414 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms