RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
RBM39-222ENST00000461849 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
RBM39-222ENST00000461849 UTRNP46939 3433 aa18.61■□□□□ 0.57
RBM39-222ENST00000461849 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
RBM39-222ENST00000461849 YY1P25490 414 aa18.6■□□□□ 0.57
RBM39-222ENST00000461849 PHF14O94880 888 aa18.59■□□□□ 0.57
RBM39-222ENST00000461849 HMOX1P09601 288 aa18.59■□□□□ 0.57
RBM39-222ENST00000461849 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
RBM39-222ENST00000461849 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
RBM39-222ENST00000461849 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.56
RBM39-222ENST00000461849 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
RBM39-222ENST00000461849 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
RBM39-222ENST00000461849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.56■□□□□ 0.56
RBM39-222ENST00000461849 SSFA2P28290 1259 aa18.56■□□□□ 0.56
RBM39-222ENST00000461849 AKAP4Q5JQC9 854 aa18.56■□□□□ 0.56
RBM39-222ENST00000461849 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
RBM39-222ENST00000461849 GNPATO15228 680 aa18.55■□□□□ 0.56
RBM39-222ENST00000461849 ITPK1Q13572 414 aa18.55■□□□□ 0.56
RBM39-222ENST00000461849 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
RBM39-222ENST00000461849 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
RBM39-222ENST00000461849 GPR162Q16538 588 aa18.54■□□□□ 0.56
RBM39-222ENST00000461849 CFAP53Q96M91 514 aa18.53■□□□□ 0.56
RBM39-222ENST00000461849 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.56
RBM39-222ENST00000461849 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
RBM39-222ENST00000461849 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
RBM39-222ENST00000461849 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
RBM39-222ENST00000461849 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
RBM39-222ENST00000461849 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
RBM39-222ENST00000461849 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
RBM39-222ENST00000461849 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
RBM39-222ENST00000461849 TRAPPC3LQ5T215 181 aa18.5■□□□□ 0.55
RBM39-222ENST00000461849 RALBP1Q15311 655 aa18.49■□□□□ 0.55
RBM39-222ENST00000461849 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
RBM39-222ENST00000461849 SLC4A9Q96Q91 983 aa18.49■□□□□ 0.55
RBM39-222ENST00000461849 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
RBM39-222ENST00000461849 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
RBM39-222ENST00000461849 ZNF831Q5JPB2 1677 aa18.48■□□□□ 0.55
RBM39-222ENST00000461849 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
RBM39-222ENST00000461849 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
RBM39-222ENST00000461849 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
RBM39-222ENST00000461849 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
RBM39-222ENST00000461849 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
RBM39-222ENST00000461849 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
RBM39-222ENST00000461849 CD2APQ9Y5K6 639 aa18.47■□□□□ 0.55
RBM39-222ENST00000461849 ADRA2BP18089 450 aa18.46■□□□□ 0.55
RBM39-222ENST00000461849 RFC4P35249 363 aa18.46■□□□□ 0.55
RBM39-222ENST00000461849 DIEXFQ68CQ4 756 aaKnown RBP18.46■□□□□ 0.55
RBM39-222ENST00000461849 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
RBM39-222ENST00000461849 PRKRIP1Q9H875 184 aaPredicted RBP18.46■□□□□ 0.55
RBM39-222ENST00000461849 RPS6KA4O75676 772 aa18.45■□□□□ 0.54
RBM39-222ENST00000461849 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
RBM39-222ENST00000461849 ANP32CO43423 234 aa18.44■□□□□ 0.54
RBM39-222ENST00000461849 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
RBM39-222ENST00000461849 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
RBM39-222ENST00000461849 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
RBM39-222ENST00000461849 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
RBM39-222ENST00000461849 NLGN1Q8N2Q7 840 aa18.43■□□□□ 0.54
RBM39-222ENST00000461849 GRIN3BO60391 1043 aa18.42■□□□□ 0.54
RBM39-222ENST00000461849 TEFQ10587 303 aa18.42■□□□□ 0.54
RBM39-222ENST00000461849 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
RBM39-222ENST00000461849 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
RBM39-222ENST00000461849 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
RBM39-222ENST00000461849 MRC1P22897 1456 aa18.41■□□□□ 0.54
RBM39-222ENST00000461849 MMP10P09238 476 aa18.41■□□□□ 0.54
RBM39-222ENST00000461849 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
RBM39-222ENST00000461849 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
RBM39-222ENST00000461849 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.542e-33■□□□□ 9.6
RBM39-222ENST00000461849 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
RBM39-222ENST00000461849 CHD4Q14839 1912 aa18.41■□□□□ 0.54
RBM39-222ENST00000461849 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
RBM39-222ENST00000461849 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
RBM39-222ENST00000461849 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
RBM39-222ENST00000461849 TJP1Q07157 1748 aa18.37■□□□□ 0.53
RBM39-222ENST00000461849 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
RBM39-222ENST00000461849 GYS1P13807 737 aa18.37■□□□□ 0.53
RBM39-222ENST00000461849 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
RBM39-222ENST00000461849 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
RBM39-222ENST00000461849 CCDC87Q9NVE4 849 aa18.37■□□□□ 0.53
RBM39-222ENST00000461849 ADAMTS7Q9UKP4 1686 aa18.37■□□□□ 0.53
RBM39-222ENST00000461849 ZPR1O75312 459 aa18.36■□□□□ 0.53
RBM39-222ENST00000461849 FCHSD2O94868 740 aa18.36■□□□□ 0.53
RBM39-222ENST00000461849 NEFMP07197 916 aa18.36■□□□□ 0.53
RBM39-222ENST00000461849 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
RBM39-222ENST00000461849 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
RBM39-222ENST00000461849 IL17REQ8NFR9 667 aa18.36■□□□□ 0.53
RBM39-222ENST00000461849 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
RBM39-222ENST00000461849 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
RBM39-222ENST00000461849 CICQ96RK0 1608 aaPredicted RBP18.36■□□□□ 0.53
RBM39-222ENST00000461849 KCPQ6ZWJ8 1503 aa18.34■□□□□ 0.53
RBM39-222ENST00000461849 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
RBM39-222ENST00000461849 STARD3NLO95772 234 aa18.34■□□□□ 0.53
RBM39-222ENST00000461849 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
RBM39-222ENST00000461849 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
RBM39-222ENST00000461849 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
RBM39-222ENST00000461849 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
RBM39-222ENST00000461849 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
RBM39-222ENST00000461849 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
RBM39-222ENST00000461849 TGFB2P61812 414 aa18.32■□□□□ 0.52
RBM39-222ENST00000461849 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
RBM39-222ENST00000461849 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms