RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 AMIGO3Q86WK7 504 aa24.42■■□□□ 1.5
SSB-206ENST00000461708 GRIN3BO60391 1043 aa24.41■■□□□ 1.5
SSB-206ENST00000461708 ATP6V1AP38606 617 aa24.4■■□□□ 1.5
SSB-206ENST00000461708 ITPK1Q13572 414 aa24.4■■□□□ 1.5
SSB-206ENST00000461708 AMER1Q5JTC6 1135 aaPredicted RBP24.4■■□□□ 1.5
SSB-206ENST00000461708 KDRP35968 1356 aa24.4■■□□□ 1.5
SSB-206ENST00000461708 ZNF530Q6P9A1 599 aaPredicted RBP24.38■■□□□ 1.49
SSB-206ENST00000461708 KIF7Q2M1P5 1343 aa24.37■■□□□ 1.49
SSB-206ENST00000461708 PELP1Q8IZL8 1130 aaKnown RBP24.37■■□□□ 1.49
SSB-206ENST00000461708 KDM6AO15550 1401 aaPredicted RBP24.36■■□□□ 1.49
SSB-206ENST00000461708 PHF14O94880 888 aa24.36■■□□□ 1.49
SSB-206ENST00000461708 IL13P35225 146 aa24.36■■□□□ 1.49
SSB-206ENST00000461708 GNPATO15228 680 aa24.35■■□□□ 1.49
SSB-206ENST00000461708 YBX3P16989 372 aaKnown RBP eCLIP24.35■■□□□ 1.49
SSB-206ENST00000461708 AEBP1Q8IUX7 1158 aa24.35■■□□□ 1.49
SSB-206ENST00000461708 C1orf141Q5JVX7 400 aa24.34■■□□□ 1.49
SSB-206ENST00000461708 RC3H1Q5TC82 1133 aaKnown RBP24.34■■□□□ 1.49
SSB-206ENST00000461708 SULT6B1Q6IMI4 303 aa24.34■■□□□ 1.49
SSB-206ENST00000461708 MTHFSP49914 203 aa24.33■■□□□ 1.49
SSB-206ENST00000461708 CABP4P57796 275 aa24.33■■□□□ 1.49
SSB-206ENST00000461708 SLC4A9Q96Q91 983 aa24.33■■□□□ 1.49
SSB-206ENST00000461708 SMIM5Q71RC9 77 aa24.32■■□□□ 1.48
SSB-206ENST00000461708 COL5A3P25940 1745 aaPredicted RBP24.32■■□□□ 1.48
SSB-206ENST00000461708 PER1O15534 1290 aaPredicted RBP24.31■■□□□ 1.48
SSB-206ENST00000461708 ADRA2BP18089 450 aa24.31■■□□□ 1.48
SSB-206ENST00000461708 RTCBQ9Y3I0 505 aaKnown RBP24.31■■□□□ 1.48
SSB-206ENST00000461708 CNTNAP4Q9C0A0 1308 aa24.31■■□□□ 1.48
SSB-206ENST00000461708 TRAPPC3LQ5T215 181 aa24.29■■□□□ 1.48
SSB-206ENST00000461708 RBM42Q9BTD8 480 aaKnown RBP24.29■■□□□ 1.48
SSB-206ENST00000461708 SCN11AQ9UI33 1791 aa24.28■■□□□ 1.48
SSB-206ENST00000461708 NLGN1Q8N2Q7 840 aa24.27■■□□□ 1.48
SSB-206ENST00000461708 NFATC2IPQ8NCF5 419 aa24.27■■□□□ 1.48
SSB-206ENST00000461708 MYH14Q7Z406 1995 aaKnown RBP24.26■■□□□ 1.47
SSB-206ENST00000461708 CICQ96RK0 1608 aaPredicted RBP24.26■■□□□ 1.47
SSB-206ENST00000461708 RPS6KA4O75676 772 aa24.26■■□□□ 1.47
SSB-206ENST00000461708 AKAP4Q5JQC9 854 aa24.26■■□□□ 1.47
SSB-206ENST00000461708 NPC1L1Q9UHC9 1359 aa24.26■■□□□ 1.47
SSB-206ENST00000461708 MMP10P09238 476 aa24.24■■□□□ 1.47
SSB-206ENST00000461708 ARHGEF1Q92888 912 aaKnown RBP24.24■■□□□ 1.47
SSB-206ENST00000461708 KIF13BQ9NQT8 1826 aa24.24■■□□□ 1.47
SSB-206ENST00000461708 C1QTNF8P60827 252 aa24.23■■□□□ 1.47
SSB-206ENST00000461708 PTCD1O75127 700 aaKnown RBP24.21■■□□□ 1.47
SSB-206ENST00000461708 RFC4P35249 363 aa24.21■■□□□ 1.47
SSB-206ENST00000461708 DIAPH1O60610 1272 aaKnown RBP24.2■■□□□ 1.46
SSB-206ENST00000461708 GYS1P13807 737 aa24.2■■□□□ 1.46
SSB-206ENST00000461708 SLC52A2Q9HAB3 445 aa24.2■■□□□ 1.46
SSB-206ENST00000461708 MRC1P22897 1456 aa24.19■■□□□ 1.46
SSB-206ENST00000461708 GIGYF1O75420 1035 aaPredicted RBP24.19■■□□□ 1.46
SSB-206ENST00000461708 TJP1Q07157 1748 aa24.18■■□□□ 1.46
SSB-206ENST00000461708 CRKLP46109 303 aaKnown RBP24.18■■□□□ 1.46
SSB-206ENST00000461708 TGFB2P61812 414 aa24.18■■□□□ 1.46
SSB-206ENST00000461708 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
SSB-206ENST00000461708 C4AP0C0L4 1744 aa24.18■■□□□ 1.46
SSB-206ENST00000461708 ADAMTS7Q9UKP4 1686 aa24.18■■□□□ 1.46
SSB-206ENST00000461708 HMOX1P09601 288 aa24.17■■□□□ 1.46
SSB-206ENST00000461708 C10orf71Q711Q0 1435 aa24.17■■□□□ 1.46
SSB-206ENST00000461708 ADCY9O60503 1353 aa24.16■■□□□ 1.46
SSB-206ENST00000461708 PXDNLA1KZ92 1463 aa24.16■■□□□ 1.46
SSB-206ENST00000461708 RNMTO43148 476 aaKnown RBP24.16■■□□□ 1.46
SSB-206ENST00000461708 LGR6Q9HBX8 967 aa24.16■■□□□ 1.46
SSB-206ENST00000461708 VIRMAQ69YN4 1812 aaKnown RBP24.16■■□□□ 1.46
SSB-206ENST00000461708 KIAA1551Q9HCM1 1747 aa24.15■■□□□ 1.46
SSB-206ENST00000461708 ATP10DQ9P241 1426 aa24.15■■□□□ 1.46
SSB-206ENST00000461708 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
SSB-206ENST00000461708 CCDC87Q9NVE4 849 aa24.14■■□□□ 1.45
SSB-206ENST00000461708 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
SSB-206ENST00000461708 INTS5Q6P9B9 1019 aaKnown RBP24.13■■□□□ 1.45
SSB-206ENST00000461708 PARP3Q9Y6F1 533 aa24.13■■□□□ 1.45
SSB-206ENST00000461708 USP42Q9H9J4 1324 aaKnown RBP24.12■■□□□ 1.45
SSB-206ENST00000461708 DNAJC10Q8IXB1 793 aa24.1■■□□□ 1.45
SSB-206ENST00000461708 VSIG10Q8N0Z9 540 aa24.1■■□□□ 1.45
SSB-206ENST00000461708 KCPQ6ZWJ8 1503 aa24.1■■□□□ 1.45
SSB-206ENST00000461708 N4BP2Q86UW6 1770 aaPredicted RBP24.09■■□□□ 1.45
SSB-206ENST00000461708 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
SSB-206ENST00000461708 A0A0G2JLW4 131 aa24.08■■□□□ 1.45
SSB-206ENST00000461708 CYP19A1P11511 503 aaPredicted RBP24.08■■□□□ 1.45
SSB-206ENST00000461708 BRCA1P38398 1863 aaKnown RBP24.08■■□□□ 1.45
SSB-206ENST00000461708 SOS1Q07889 1333 aaPredicted RBP24.08■■□□□ 1.44
SSB-206ENST00000461708 UBR2Q8IWV8 1755 aa24.07■■□□□ 1.44
SSB-206ENST00000461708 FKBP8Q14318 412 aa24.07■■□□□ 1.44
SSB-206ENST00000461708 GPBP1L1Q9HC44 474 aaPredicted RBP24.07■■□□□ 1.44
SSB-206ENST00000461708 SRP68Q9UHB9 627 aaKnown RBP24.07■■□□□ 1.44
SSB-206ENST00000461708 WWC3Q9ULE0 1092 aa24.07■■□□□ 1.44
SSB-206ENST00000461708 DPEP1P16444 411 aa24.06■■□□□ 1.44
SSB-206ENST00000461708 SLC39A6Q13433 755 aa24.06■■□□□ 1.44
SSB-206ENST00000461708 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
SSB-206ENST00000461708 CEP350Q5VT06 3117 aa24.05■■□□□ 1.44
SSB-206ENST00000461708 U2SURPO15042 1029 aaKnown RBP24.04■■□□□ 1.44
SSB-206ENST00000461708 ZPR1O75312 459 aa24.04■■□□□ 1.44
SSB-206ENST00000461708 TM4SF1P30408 202 aa24.04■■□□□ 1.44
SSB-206ENST00000461708 DDR1Q08345 913 aa24.04■■□□□ 1.44
SSB-206ENST00000461708 BCS1LQ9Y276 419 aa24.04■■□□□ 1.44
SSB-206ENST00000461708 GNAT3A8MTJ3 354 aa24.03■■□□□ 1.44
SSB-206ENST00000461708 KCNA3P22001 575 aa24.03■■□□□ 1.44
SSB-206ENST00000461708 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
SSB-206ENST00000461708 CFAP53Q96M91 514 aa24.02■■□□□ 1.44
SSB-206ENST00000461708 ARFGEF1Q9Y6D6 1849 aa24.02■■□□□ 1.44
SSB-206ENST00000461708 POLRMTO00411 1230 aaKnown RBP24.01■■□□□ 1.43
SSB-206ENST00000461708 COL15A1P39059 1388 aa24.01■■□□□ 1.43
SSB-206ENST00000461708 TEFQ10587 303 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms