RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
NPHP1-209ENST00000461707 COG3Q96JB2 828 aa9.31□□□□□ -0.92
NPHP1-209ENST00000461707 NFKBIBQ15653 356 aa9.31□□□□□ -0.92
NPHP1-209ENST00000461707 NUTM2GQ5VZR2 741 aa9.31□□□□□ -0.92
NPHP1-209ENST00000461707 DISP2A7MBM2 1401 aa9.31□□□□□ -0.92
NPHP1-209ENST00000461707 INTS3Q68E01 1043 aaKnown RBP9.31□□□□□ -0.92
NPHP1-209ENST00000461707 SULT6B1Q6IMI4 303 aa9.31□□□□□ -0.92
NPHP1-209ENST00000461707 FRAT2O75474 233 aaPredicted RBP9.3□□□□□ -0.92
NPHP1-209ENST00000461707 DOT1LQ8TEK3 1739 aa9.3□□□□□ -0.92
NPHP1-209ENST00000461707 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
NPHP1-209ENST00000461707 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
NPHP1-209ENST00000461707 NUP98P52948 1817 aa9.3□□□□□ -0.92
NPHP1-209ENST00000461707 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
NPHP1-209ENST00000461707 HTATSF1O43719 755 aaKnown RBP9.29□□□□□ -0.92
NPHP1-209ENST00000461707 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
NPHP1-209ENST00000461707 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
NPHP1-209ENST00000461707 FOCADQ5VW36 1801 aa9.29□□□□□ -0.92
NPHP1-209ENST00000461707 LRRC37AA6NMS7 1700 aa9.29□□□□□ -0.92
NPHP1-209ENST00000461707 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
NPHP1-209ENST00000461707 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
NPHP1-209ENST00000461707 RBM25P49756 843 aaKnown RBP9.28□□□□□ -0.92
NPHP1-209ENST00000461707 NUCB1Q02818 461 aa9.28□□□□□ -0.92
NPHP1-209ENST00000461707 SLKQ9H2G2 1235 aaPredicted RBP9.28□□□□□ -0.92
NPHP1-209ENST00000461707 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.92
NPHP1-209ENST00000461707 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.92
NPHP1-209ENST00000461707 TWISTNBQ3B726 338 aaPredicted RBP9.27□□□□□ -0.92
NPHP1-209ENST00000461707 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.92
NPHP1-209ENST00000461707 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.92
NPHP1-209ENST00000461707 UTYO14607 1347 aa9.27□□□□□ -0.92
NPHP1-209ENST00000461707 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
NPHP1-209ENST00000461707 DDX19BQ9UMR2 479 aa9.27□□□□□ -0.93
NPHP1-209ENST00000461707 MAP3K19Q56UN5 1328 aa9.27□□□□□ -0.93
NPHP1-209ENST00000461707 USP42Q9H9J4 1324 aaKnown RBP9.27□□□□□ -0.93
NPHP1-209ENST00000461707 QSER1Q2KHR3 1735 aa9.27□□□□□ -0.93
NPHP1-209ENST00000461707 MFAP1P55081 439 aaKnown RBP9.26□□□□□ -0.93
NPHP1-209ENST00000461707 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
NPHP1-209ENST00000461707 CDK5RAP2Q96SN8 1893 aa9.26□□□□□ -0.93
NPHP1-209ENST00000461707 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
NPHP1-209ENST00000461707 TBC1D2Q9BYX2 928 aa9.26□□□□□ -0.93
NPHP1-209ENST00000461707 CHD4Q14839 1912 aa9.26□□□□□ -0.93
NPHP1-209ENST00000461707 MAST2Q6P0Q8 1798 aa9.25□□□□□ -0.93
NPHP1-209ENST00000461707 MEGF6O75095 1541 aa9.25□□□□□ -0.93
NPHP1-209ENST00000461707 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-209ENST00000461707 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
NPHP1-209ENST00000461707 KCNA6P17658 529 aa9.25□□□□□ -0.93
NPHP1-209ENST00000461707 NRXN2Q9P2S2 1712 aa9.25□□□□□ -0.93
NPHP1-209ENST00000461707 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
NPHP1-209ENST00000461707 MYO5AQ9Y4I1 1855 aaKnown RBP9.24□□□□□ -0.93
NPHP1-209ENST00000461707 COL4A1P02462 1669 aa9.24□□□□□ -0.93
NPHP1-209ENST00000461707 AEBP2Q6ZN18 517 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-209ENST00000461707 GNAI1P63096 354 aa9.24□□□□□ -0.93
NPHP1-209ENST00000461707 ANKRD45Q5TZF3 282 aa9.24□□□□□ -0.93
NPHP1-209ENST00000461707 G2E3Q7L622 706 aa9.24□□□□□ -0.93
NPHP1-209ENST00000461707 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
NPHP1-209ENST00000461707 OTUD7AQ8TE49 926 aaPredicted RBP9.24□□□□□ -0.93
NPHP1-209ENST00000461707 LAMB1P07942 1786 aa9.23□□□□□ -0.93
NPHP1-209ENST00000461707 PNNQ9H307 717 aaKnown RBP9.23□□□□□ -0.93
NPHP1-209ENST00000461707 USHBP1Q8N6Y0 703 aa9.23□□□□□ -0.93
NPHP1-209ENST00000461707 EYA1Q99502 592 aa9.23□□□□□ -0.93
NPHP1-209ENST00000461707 TNS3Q68CZ2 1445 aa9.22□□□□□ -0.93
NPHP1-209ENST00000461707 CHD1LQ86WJ1 897 aa9.22□□□□□ -0.93
NPHP1-209ENST00000461707 NECTIN2Q92692 538 aa9.22□□□□□ -0.93
NPHP1-209ENST00000461707 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-209ENST00000461707 F6X3S4 739 aa9.22□□□□□ -0.93
NPHP1-209ENST00000461707 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-209ENST00000461707 IPO8O15397 1037 aaKnown RBP9.22□□□□□ -0.93
NPHP1-209ENST00000461707 APBB1O00213 710 aa9.21□□□□□ -0.93
NPHP1-209ENST00000461707 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.93
NPHP1-209ENST00000461707 HDGFP51858 240 aaKnown RBP9.21□□□□□ -0.93
NPHP1-209ENST00000461707 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
NPHP1-209ENST00000461707 SMARCA5O60264 1052 aaPredicted RBP9.21□□□□□ -0.94
NPHP1-209ENST00000461707 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
NPHP1-209ENST00000461707 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
NPHP1-209ENST00000461707 C22orf23Q9BZE7 217 aa9.21□□□□□ -0.94
NPHP1-209ENST00000461707 COL5A2P05997 1499 aaPredicted RBP9.21□□□□□ -0.94
NPHP1-209ENST00000461707 PTPRCP08575 1304 aa9.2□□□□□ -0.94
NPHP1-209ENST00000461707 SNX21Q969T3 373 aa9.2□□□□□ -0.94
NPHP1-209ENST00000461707 MEIS3Q99687 375 aa9.2□□□□□ -0.94
NPHP1-209ENST00000461707 BCL9LQ86UU0 1499 aa9.2□□□□□ -0.94
NPHP1-209ENST00000461707 GSPT1P15170 499 aaKnown RBP9.2□□□□□ -0.94
NPHP1-209ENST00000461707 HOXC9P31274 260 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 NLRP6P59044 892 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 RTN4Q9NQC3 1192 aaKnown RBP9.19□□□□□ -0.94
NPHP1-209ENST00000461707 BRPF3Q9ULD4 1205 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 EID1Q9Y6B2 187 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 SLC4A2P04920 1241 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
NPHP1-209ENST00000461707 XPCQ01831 940 aaPredicted RBP9.19□□□□□ -0.94
NPHP1-209ENST00000461707 ADCY9O60503 1353 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 MAP3K5Q99683 1374 aa9.19□□□□□ -0.94
NPHP1-209ENST00000461707 KCNB2Q92953 911 aa9.18□□□□□ -0.94
NPHP1-209ENST00000461707 POLA2Q14181 598 aa9.18□□□□□ -0.94
NPHP1-209ENST00000461707 DCTPP1Q9H773 170 aa9.18□□□□□ -0.94
NPHP1-209ENST00000461707 AMPHP49418 695 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 GSE1Q14687 1217 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 BMP2KLQ5H9B9 411 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 HOXB7P09629 217 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 IL17REQ8NFR9 667 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms