RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 SCN11AQ9UI33 1791 aa23.55■■□□□ 1.36
MRPL28-207ENST00000461550 COL24A1Q17RW2 1714 aa23.54■■□□□ 1.36
MRPL28-207ENST00000461550 U2SURPO15042 1029 aaKnown RBP23.54■■□□□ 1.36
MRPL28-207ENST00000461550 ITPK1Q13572 414 aa23.54■■□□□ 1.36
MRPL28-207ENST00000461550 VIRMAQ69YN4 1812 aaKnown RBP23.53■■□□□ 1.36
MRPL28-207ENST00000461550 AK7Q96M32 723 aa23.53■■□□□ 1.36
MRPL28-207ENST00000461550 ATP6V1AP38606 617 aa23.52■■□□□ 1.36
MRPL28-207ENST00000461550 MSL1Q68DK7 614 aa23.52■■□□□ 1.36
MRPL28-207ENST00000461550 PHF14O94880 888 aa23.51■■□□□ 1.35
MRPL28-207ENST00000461550 SYT17Q9BSW7 474 aa23.5■■□□□ 1.35
MRPL28-207ENST00000461550 RBM42Q9BTD8 480 aaKnown RBP23.5■■□□□ 1.35
MRPL28-207ENST00000461550 POLD1P28340 1107 aa23.49■■□□□ 1.35
MRPL28-207ENST00000461550 AKAP4Q5JQC9 854 aa23.49■■□□□ 1.35
MRPL28-207ENST00000461550 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
MRPL28-207ENST00000461550 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
MRPL28-207ENST00000461550 SLC4A9Q96Q91 983 aa23.49■■□□□ 1.35
MRPL28-207ENST00000461550 PPP2R1AP30153 589 aa23.49■■□□□ 1.35
MRPL28-207ENST00000461550 MTHFSDQ2M296 383 aaKnown RBP23.49■■□□□ 1.35
MRPL28-207ENST00000461550 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
MRPL28-207ENST00000461550 HMGB2P26583 209 aaKnown RBP23.47■■□□□ 1.35
MRPL28-207ENST00000461550 COL5A3P25940 1745 aaPredicted RBP23.46■■□□□ 1.35
MRPL28-207ENST00000461550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.46■■□□□ 1.35
MRPL28-207ENST00000461550 GNPATO15228 680 aa23.46■■□□□ 1.35
MRPL28-207ENST00000461550 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
MRPL28-207ENST00000461550 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
MRPL28-207ENST00000461550 ZNF831Q5JPB2 1677 aa23.46■■□□□ 1.35
MRPL28-207ENST00000461550 FLAD1Q8NFF5 587 aa23.45■■□□□ 1.34
MRPL28-207ENST00000461550 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
MRPL28-207ENST00000461550 ADAMTS7Q9UKP4 1686 aa23.43■■□□□ 1.34
MRPL28-207ENST00000461550 DCAF8L1A6NGE4 600 aa23.43■■□□□ 1.34
MRPL28-207ENST00000461550 SLC52A2Q9HAB3 445 aa23.43■■□□□ 1.34
MRPL28-207ENST00000461550 MRC1P22897 1456 aa23.42■■□□□ 1.34
MRPL28-207ENST00000461550 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
MRPL28-207ENST00000461550 SSFA2P28290 1259 aa23.42■■□□□ 1.34
MRPL28-207ENST00000461550 MYH14Q7Z406 1995 aaKnown RBP23.42■■□□□ 1.34
MRPL28-207ENST00000461550 TJP1Q07157 1748 aa23.41■■□□□ 1.34
MRPL28-207ENST00000461550 UTRNP46939 3433 aa23.39■■□□□ 1.34
MRPL28-207ENST00000461550 PRKAR2BP31323 418 aa23.39■■□□□ 1.34
MRPL28-207ENST00000461550 SLC39A6Q13433 755 aa23.39■■□□□ 1.34
MRPL28-207ENST00000461550 NLGN2Q8NFZ4 835 aa23.38■■□□□ 1.33
MRPL28-207ENST00000461550 PHACTR3Q96KR7 559 aa23.38■■□□□ 1.33
MRPL28-207ENST00000461550 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
MRPL28-207ENST00000461550 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
MRPL28-207ENST00000461550 U2AF1L5P0DN76 240 aaPredicted RBP23.37■■□□□ 1.33
MRPL28-207ENST00000461550 U2AF1Q01081 240 aaKnown RBP eCLIP23.37■■□□□ 1.33
MRPL28-207ENST00000461550 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
MRPL28-207ENST00000461550 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
MRPL28-207ENST00000461550 RTCBQ9Y3I0 505 aaKnown RBP23.36■■□□□ 1.33
MRPL28-207ENST00000461550 GAS2L2Q8NHY3 880 aa23.36■■□□□ 1.33
MRPL28-207ENST00000461550 CICQ96RK0 1608 aaPredicted RBP23.35■■□□□ 1.33
MRPL28-207ENST00000461550 RC3H1Q5TC82 1133 aaKnown RBP23.35■■□□□ 1.33
MRPL28-207ENST00000461550 C4AP0C0L4 1744 aa23.35■■□□□ 1.33
MRPL28-207ENST00000461550 KCPQ6ZWJ8 1503 aa23.34■■□□□ 1.33
MRPL28-207ENST00000461550 GNAT3A8MTJ3 354 aa23.34■■□□□ 1.33
MRPL28-207ENST00000461550 CRKLP46109 303 aaKnown RBP23.34■■□□□ 1.33
MRPL28-207ENST00000461550 IL17REQ8NFR9 667 aa23.34■■□□□ 1.33
MRPL28-207ENST00000461550 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
MRPL28-207ENST00000461550 TRAPPC3LQ5T215 181 aa23.33■■□□□ 1.33
MRPL28-207ENST00000461550 SIPA1L3O60292 1781 aaPredicted RBP23.33■■□□□ 1.32
MRPL28-207ENST00000461550 YY1P25490 414 aa23.32■■□□□ 1.32
MRPL28-207ENST00000461550 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
MRPL28-207ENST00000461550 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
MRPL28-207ENST00000461550 ARHGEF1Q92888 912 aaKnown RBP23.32■■□□□ 1.32
MRPL28-207ENST00000461550 UBR2Q8IWV8 1755 aa23.32■■□□□ 1.32
MRPL28-207ENST00000461550 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
MRPL28-207ENST00000461550 TEFQ10587 303 aa23.3■■□□□ 1.32
MRPL28-207ENST00000461550 GPR162Q16538 588 aa23.3■■□□□ 1.32
MRPL28-207ENST00000461550 FCHSD2O94868 740 aa23.28■■□□□ 1.32
MRPL28-207ENST00000461550 ADRA2BP18089 450 aa23.28■■□□□ 1.32
MRPL28-207ENST00000461550 RFC4P35249 363 aa23.28■■□□□ 1.32
MRPL28-207ENST00000461550 INTS5Q6P9B9 1019 aaKnown RBP23.28■■□□□ 1.32
MRPL28-207ENST00000461550 MMP10P09238 476 aa23.27■■□□□ 1.32
MRPL28-207ENST00000461550 TTC5Q8N0Z6 440 aa23.26■■□□□ 1.31
MRPL28-207ENST00000461550 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
MRPL28-207ENST00000461550 SRP68Q9UHB9 627 aaKnown RBP23.26■■□□□ 1.31
MRPL28-207ENST00000461550 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
MRPL28-207ENST00000461550 CHD4Q14839 1912 aa23.26■■□□□ 1.31
MRPL28-207ENST00000461550 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
MRPL28-207ENST00000461550 GYS1P13807 737 aa23.25■■□□□ 1.31
MRPL28-207ENST00000461550 CD2APQ9Y5K6 639 aa23.25■■□□□ 1.31
MRPL28-207ENST00000461550 MCM10Q7L590 875 aa23.24■■□□□ 1.31
MRPL28-207ENST00000461550 ZNF496Q96IT1 587 aaPredicted RBP23.24■■□□□ 1.31
MRPL28-207ENST00000461550 YBX3P16989 372 aaKnown RBP eCLIP23.23■■□□□ 1.319e-6■□□□□ 10.4
MRPL28-207ENST00000461550 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
MRPL28-207ENST00000461550 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
MRPL28-207ENST00000461550 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
MRPL28-207ENST00000461550 DLG5Q8TDM6 1919 aa23.22■■□□□ 1.31
MRPL28-207ENST00000461550 NLGN1Q8N2Q7 840 aa23.22■■□□□ 1.31
MRPL28-207ENST00000461550 ZBTB1Q9Y2K1 713 aa23.22■■□□□ 1.31
MRPL28-207ENST00000461550 KCNQ3O43525 872 aa23.21■■□□□ 1.31
MRPL28-207ENST00000461550 RALBP1Q15311 655 aa23.21■■□□□ 1.31
MRPL28-207ENST00000461550 VSIG10Q8N0Z9 540 aa23.21■■□□□ 1.31
MRPL28-207ENST00000461550 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
MRPL28-207ENST00000461550 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
MRPL28-207ENST00000461550 USP42Q9H9J4 1324 aaKnown RBP23.21■■□□□ 1.31
MRPL28-207ENST00000461550 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.3
MRPL28-207ENST00000461550 BTBD11A6QL63 1104 aa23.19■■□□□ 1.3
MRPL28-207ENST00000461550 FKBP8Q14318 412 aa23.18■■□□□ 1.3
MRPL28-207ENST00000461550 COL15A1P39059 1388 aa23.18■■□□□ 1.3
MRPL28-207ENST00000461550 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms