RNA–Protein interactions for RNA: ENST00000461336.5

KCNIP3-204, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 2

Gene KCNIP3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-204ENST00000461336 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
KCNIP3-204ENST00000461336 PIGBQ92521 554 aa16.42■□□□□ 0.22
KCNIP3-204ENST00000461336 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
KCNIP3-204ENST00000461336 SMIM5Q71RC9 77 aa16.41■□□□□ 0.22
KCNIP3-204ENST00000461336 AK7Q96M32 723 aa16.41■□□□□ 0.22
KCNIP3-204ENST00000461336 ITGB4P16144 1822 aa16.4■□□□□ 0.22
KCNIP3-204ENST00000461336 SSFA2P28290 1259 aa16.4■□□□□ 0.22
KCNIP3-204ENST00000461336 EYA1Q99502 592 aa16.4■□□□□ 0.22
KCNIP3-204ENST00000461336 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
KCNIP3-204ENST00000461336 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.21
KCNIP3-204ENST00000461336 FSTL1Q12841 308 aa16.39■□□□□ 0.21
KCNIP3-204ENST00000461336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.38■□□□□ 0.21
KCNIP3-204ENST00000461336 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
KCNIP3-204ENST00000461336 SIK1P57059 783 aa16.38■□□□□ 0.21
KCNIP3-204ENST00000461336 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
KCNIP3-204ENST00000461336 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
KCNIP3-204ENST00000461336 MAP2P11137 1827 aaKnown RBP16.38■□□□□ 0.21
KCNIP3-204ENST00000461336 PHKG2P15735 406 aa16.37■□□□□ 0.21
KCNIP3-204ENST00000461336 TMOD3Q9NYL9 352 aa16.37■□□□□ 0.21
KCNIP3-204ENST00000461336 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
KCNIP3-204ENST00000461336 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
KCNIP3-204ENST00000461336 PHF14O94880 888 aa16.36■□□□□ 0.21
KCNIP3-204ENST00000461336 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
KCNIP3-204ENST00000461336 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
KCNIP3-204ENST00000461336 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
KCNIP3-204ENST00000461336 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
KCNIP3-204ENST00000461336 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
KCNIP3-204ENST00000461336 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
KCNIP3-204ENST00000461336 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
KCNIP3-204ENST00000461336 ITPK1Q13572 414 aa16.34■□□□□ 0.21
KCNIP3-204ENST00000461336 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
KCNIP3-204ENST00000461336 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.2
KCNIP3-204ENST00000461336 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
KCNIP3-204ENST00000461336 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
KCNIP3-204ENST00000461336 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
KCNIP3-204ENST00000461336 GNPATO15228 680 aa16.32■□□□□ 0.2
KCNIP3-204ENST00000461336 KDRP35968 1356 aa16.32■□□□□ 0.2
KCNIP3-204ENST00000461336 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
KCNIP3-204ENST00000461336 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
KCNIP3-204ENST00000461336 TNRC6CQ9HCJ0 1690 aaKnown RBP16.32■□□□□ 0.2
KCNIP3-204ENST00000461336 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
KCNIP3-204ENST00000461336 ERVV-2B6SEH9 535 aa16.31■□□□□ 0.2
KCNIP3-204ENST00000461336 MMP10P09238 476 aa16.31■□□□□ 0.2
KCNIP3-204ENST00000461336 C9orf131Q5VYM1 1079 aa16.31■□□□□ 0.2
KCNIP3-204ENST00000461336 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
KCNIP3-204ENST00000461336 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
KCNIP3-204ENST00000461336 TGFB2P61812 414 aa16.3■□□□□ 0.2
KCNIP3-204ENST00000461336 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
KCNIP3-204ENST00000461336 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
KCNIP3-204ENST00000461336 ADRA2BP18089 450 aa16.28■□□□□ 0.2
KCNIP3-204ENST00000461336 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
KCNIP3-204ENST00000461336 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 DPEP1P16444 411 aa16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 NLGN1Q8N2Q7 840 aa16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 SLC4A9Q96Q91 983 aa16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 RRAGCQ9HB90 399 aa16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
KCNIP3-204ENST00000461336 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 C4AP0C0L4 1744 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 FCHSD2O94868 740 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 KCNA3P22001 575 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
KCNIP3-204ENST00000461336 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
KCNIP3-204ENST00000461336 PANK3Q9H999 370 aa16.25■□□□□ 0.19
KCNIP3-204ENST00000461336 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
KCNIP3-204ENST00000461336 RPS6KA4O75676 772 aa16.24■□□□□ 0.19
KCNIP3-204ENST00000461336 SBF1O95248 1867 aa16.24■□□□□ 0.19
KCNIP3-204ENST00000461336 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
KCNIP3-204ENST00000461336 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
KCNIP3-204ENST00000461336 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
KCNIP3-204ENST00000461336 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
KCNIP3-204ENST00000461336 GYS1P13807 737 aa16.22■□□□□ 0.19
KCNIP3-204ENST00000461336 CABP4P57796 275 aa16.22■□□□□ 0.19
KCNIP3-204ENST00000461336 RNF181Q9P0P0 153 aa16.22■□□□□ 0.19
KCNIP3-204ENST00000461336 RFC4P35249 363 aa16.21■□□□□ 0.19
KCNIP3-204ENST00000461336 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.19
KCNIP3-204ENST00000461336 MTHFSP49914 203 aa16.2■□□□□ 0.18
KCNIP3-204ENST00000461336 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
KCNIP3-204ENST00000461336 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
KCNIP3-204ENST00000461336 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
KCNIP3-204ENST00000461336 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
KCNIP3-204ENST00000461336 IL13P35225 146 aa16.17■□□□□ 0.18
KCNIP3-204ENST00000461336 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
KCNIP3-204ENST00000461336 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
KCNIP3-204ENST00000461336 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
KCNIP3-204ENST00000461336 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
KCNIP3-204ENST00000461336 PCDH10Q9P2E7 1040 aa16.17■□□□□ 0.18
KCNIP3-204ENST00000461336 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
KCNIP3-204ENST00000461336 KNSTRNQ9Y448 316 aa16.16■□□□□ 0.18
KCNIP3-204ENST00000461336 MYH14Q7Z406 1995 aaKnown RBP16.16■□□□□ 0.18
KCNIP3-204ENST00000461336 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
KCNIP3-204ENST00000461336 ZC3H4Q9UPT8 1303 aaKnown RBP16.16■□□□□ 0.18
KCNIP3-204ENST00000461336 DALRD3Q5D0E6 543 aaKnown RBP16.15■□□□□ 0.18
KCNIP3-204ENST00000461336 FOXN1O15353 648 aa16.14■□□□□ 0.17
KCNIP3-204ENST00000461336 AKAP4Q5JQC9 854 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms