RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 A0A0G2JLW4 131 aa24.05■■□□□ 1.44
TOP3A-202ENST00000461127 ITPK1Q13572 414 aa24.05■■□□□ 1.44
TOP3A-202ENST00000461127 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
TOP3A-202ENST00000461127 FCHSD2O94868 740 aa24.04■■□□□ 1.44
TOP3A-202ENST00000461127 TMF1P82094 1093 aa24.04■■□□□ 1.44
TOP3A-202ENST00000461127 TRAPPC3LQ5T215 181 aa24.04■■□□□ 1.44
TOP3A-202ENST00000461127 CCDC87Q9NVE4 849 aa24.04■■□□□ 1.44
TOP3A-202ENST00000461127 ASAP1Q9ULH1 1129 aa24.04■■□□□ 1.44
TOP3A-202ENST00000461127 RTCBQ9Y3I0 505 aaKnown RBP24.04■■□□□ 1.44
TOP3A-202ENST00000461127 KLRG1Q96E93 195 aa24.03■■□□□ 1.44
TOP3A-202ENST00000461127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.02■■□□□ 1.44
TOP3A-202ENST00000461127 PLEKHG2Q9H7P9 1386 aa24.02■■□□□ 1.44
TOP3A-202ENST00000461127 C10orf71Q711Q0 1435 aa24.01■■□□□ 1.43
TOP3A-202ENST00000461127 KIAA1551Q9HCM1 1747 aa24.01■■□□□ 1.43
TOP3A-202ENST00000461127 KIF20BQ96Q89 1820 aa24.01■■□□□ 1.43
TOP3A-202ENST00000461127 FSTL1Q12841 308 aa24.01■■□□□ 1.43
TOP3A-202ENST00000461127 DPEP1P16444 411 aa24■■□□□ 1.43
TOP3A-202ENST00000461127 IFNL2Q8IZJ0 200 aa24■■□□□ 1.43
TOP3A-202ENST00000461127 ADRA2BP18089 450 aa23.99■■□□□ 1.43
TOP3A-202ENST00000461127 C9orf131Q5VYM1 1079 aa23.99■■□□□ 1.43
TOP3A-202ENST00000461127 EMILIN1Q9Y6C2 1016 aa23.99■■□□□ 1.43
TOP3A-202ENST00000461127 PARP3Q9Y6F1 533 aa23.99■■□□□ 1.43
TOP3A-202ENST00000461127 KDM2BQ8NHM5 1336 aa23.99■■□□□ 1.43
TOP3A-202ENST00000461127 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
TOP3A-202ENST00000461127 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
TOP3A-202ENST00000461127 COL13A1Q5TAT6 717 aaPredicted RBP23.98■■□□□ 1.43
TOP3A-202ENST00000461127 JMYQ8N9B5 988 aa23.98■■□□□ 1.43
TOP3A-202ENST00000461127 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
TOP3A-202ENST00000461127 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
TOP3A-202ENST00000461127 PHKG2P15735 406 aa23.96■■□□□ 1.43
TOP3A-202ENST00000461127 RFC4P35249 363 aa23.96■■□□□ 1.43
TOP3A-202ENST00000461127 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
TOP3A-202ENST00000461127 CAPN15O75808 1086 aa23.95■■□□□ 1.42
TOP3A-202ENST00000461127 HTRA3P83110 453 aa23.95■■□□□ 1.42
TOP3A-202ENST00000461127 RC3H1Q5TC82 1133 aaKnown RBP23.95■■□□□ 1.42
TOP3A-202ENST00000461127 ARHGEF1Q92888 912 aaKnown RBP23.95■■□□□ 1.42
TOP3A-202ENST00000461127 BRCA1P38398 1863 aaKnown RBP23.94■■□□□ 1.42
TOP3A-202ENST00000461127 CDCA8Q53HL2 280 aa23.94■■□□□ 1.42
TOP3A-202ENST00000461127 PIM2Q9P1W9 311 aa23.94■■□□□ 1.42
TOP3A-202ENST00000461127 GYS1P13807 737 aa23.93■■□□□ 1.42
TOP3A-202ENST00000461127 TNS4Q8IZW8 715 aa23.93■■□□□ 1.42
TOP3A-202ENST00000461127 EYA1Q99502 592 aa23.93■■□□□ 1.42
TOP3A-202ENST00000461127 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
TOP3A-202ENST00000461127 ARFGEF1Q9Y6D6 1849 aa23.93■■□□□ 1.42
TOP3A-202ENST00000461127 KDRP35968 1356 aa23.92■■□□□ 1.42
TOP3A-202ENST00000461127 WASHC2AQ641Q2 1341 aa23.92■■□□□ 1.42
TOP3A-202ENST00000461127 DALRD3Q5D0E6 543 aaKnown RBP23.92■■□□□ 1.42
TOP3A-202ENST00000461127 RPS6KA4O75676 772 aa23.91■■□□□ 1.42
TOP3A-202ENST00000461127 RNF181Q9P0P0 153 aa23.91■■□□□ 1.42
TOP3A-202ENST00000461127 KCPQ6ZWJ8 1503 aa23.9■■□□□ 1.42
TOP3A-202ENST00000461127 CNTNAP4Q9C0A0 1308 aa23.9■■□□□ 1.42
TOP3A-202ENST00000461127 KCNA3P22001 575 aa23.9■■□□□ 1.42
TOP3A-202ENST00000461127 ZNF831Q5JPB2 1677 aa23.89■■□□□ 1.42
TOP3A-202ENST00000461127 ERVV-2B6SEH9 535 aa23.89■■□□□ 1.41
TOP3A-202ENST00000461127 SMC1BQ8NDV3 1235 aa23.89■■□□□ 1.41
TOP3A-202ENST00000461127 DCAF5Q96JK2 942 aa23.89■■□□□ 1.41
TOP3A-202ENST00000461127 RRAGCQ9HB90 399 aa23.89■■□□□ 1.41
TOP3A-202ENST00000461127 ANKRD26Q9UPS8 1709 aa23.87■■□□□ 1.41
TOP3A-202ENST00000461127 HSP90AB1P08238 724 aaKnown RBP23.87■■□□□ 1.41
TOP3A-202ENST00000461127 PRELPP51888 382 aa23.87■■□□□ 1.41
TOP3A-202ENST00000461127 SLC4A9Q96Q91 983 aa23.87■■□□□ 1.41
TOP3A-202ENST00000461127 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
TOP3A-202ENST00000461127 PCNTO95613 3336 aa23.86■■□□□ 1.41
TOP3A-202ENST00000461127 COL5A3P25940 1745 aaPredicted RBP23.85■■□□□ 1.41
TOP3A-202ENST00000461127 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
TOP3A-202ENST00000461127 CABP4P57796 275 aa23.82■■□□□ 1.4
TOP3A-202ENST00000461127 ZC3H4Q9UPT8 1303 aaKnown RBP23.82■■□□□ 1.4
TOP3A-202ENST00000461127 MYH14Q7Z406 1995 aaKnown RBP23.81■■□□□ 1.4
TOP3A-202ENST00000461127 POLKQ9UBT6 870 aa23.8■■□□□ 1.4
TOP3A-202ENST00000461127 SBF1O95248 1867 aa23.79■■□□□ 1.4
TOP3A-202ENST00000461127 CHRNA5P30532 468 aa23.79■■□□□ 1.4
TOP3A-202ENST00000461127 CRKLP46109 303 aaKnown RBP23.79■■□□□ 1.4
TOP3A-202ENST00000461127 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
TOP3A-202ENST00000461127 FKBP8Q14318 412 aa23.79■■□□□ 1.4
TOP3A-202ENST00000461127 PLEKHO1Q53GL0 409 aaPredicted RBP23.79■■□□□ 1.4
TOP3A-202ENST00000461127 USP42Q9H9J4 1324 aaKnown RBP23.79■■□□□ 1.4
TOP3A-202ENST00000461127 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
TOP3A-202ENST00000461127 DDR1Q08345 913 aa23.78■■□□□ 1.4
TOP3A-202ENST00000461127 SRP68Q9UHB9 627 aaKnown RBP23.78■■□□□ 1.4
TOP3A-202ENST00000461127 VEGFAP15692 232 aaPredicted RBP23.77■■□□□ 1.4
TOP3A-202ENST00000461127 HSPA1AP0DMV8 641 aaKnown RBP23.76■■□□□ 1.39
TOP3A-202ENST00000461127 HSPA1BP0DMV9 641 aaKnown RBP23.76■■□□□ 1.39
TOP3A-202ENST00000461127 ZNF530Q6P9A1 599 aaPredicted RBP23.76■■□□□ 1.39
TOP3A-202ENST00000461127 AMOTQ4VCS5 1084 aa23.75■■□□□ 1.39
TOP3A-202ENST00000461127 LMNB1P20700 586 aa23.74■■□□□ 1.39
TOP3A-202ENST00000461127 MTHFSP49914 203 aa23.74■■□□□ 1.39
TOP3A-202ENST00000461127 GLTPD2A6NH11 291 aa23.73■■□□□ 1.39
TOP3A-202ENST00000461127 POLRMTO00411 1230 aaKnown RBP23.73■■□□□ 1.39
TOP3A-202ENST00000461127 ZPR1O75312 459 aa23.73■■□□□ 1.39
TOP3A-202ENST00000461127 KDM6AO15550 1401 aaPredicted RBP23.73■■□□□ 1.39
TOP3A-202ENST00000461127 RASSF7Q02833 373 aa23.72■■□□□ 1.39
TOP3A-202ENST00000461127 C1orf141Q5JVX7 400 aa23.72■■□□□ 1.39
TOP3A-202ENST00000461127 TM4SF1P30408 202 aa23.71■■□□□ 1.39
TOP3A-202ENST00000461127 TNNT2P45379 298 aaPredicted RBP23.71■■□□□ 1.39
TOP3A-202ENST00000461127 NFATC2IPQ8NCF5 419 aa23.7■■□□□ 1.38
TOP3A-202ENST00000461127 USPL1Q5W0Q7 1092 aa23.67■■□□□ 1.38
TOP3A-202ENST00000461127 TTLL6Q8N841 843 aa23.67■■□□□ 1.38
TOP3A-202ENST00000461127 DPY19L2Q6NUT2 758 aa23.66■■□□□ 1.38
TOP3A-202ENST00000461127 INTS5Q6P9B9 1019 aaKnown RBP23.66■■□□□ 1.38
TOP3A-202ENST00000461127 TJP1Q07157 1748 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms