RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 SMIM5Q71RC9 77 aa23.98■■□□□ 1.43
SLC39A1-208ENST00000461071 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
SLC39A1-208ENST00000461071 IGSF1Q8N6C5 1336 aa23.98■■□□□ 1.43
SLC39A1-208ENST00000461071 KDRP35968 1356 aa23.98■■□□□ 1.43
SLC39A1-208ENST00000461071 CICQ96RK0 1608 aaPredicted RBP23.98■■□□□ 1.43
SLC39A1-208ENST00000461071 ATP6V1AP38606 617 aa23.97■■□□□ 1.43
SLC39A1-208ENST00000461071 ERVV-2B6SEH9 535 aa23.96■■□□□ 1.43
SLC39A1-208ENST00000461071 GNPATO15228 680 aa23.96■■□□□ 1.43
SLC39A1-208ENST00000461071 BRCA1P38398 1863 aaKnown RBP23.94■■□□□ 1.42
SLC39A1-208ENST00000461071 N4BP2Q86UW6 1770 aaPredicted RBP23.94■■□□□ 1.42
SLC39A1-208ENST00000461071 GPBP1L1Q9HC44 474 aaPredicted RBP23.93■■□□□ 1.42
SLC39A1-208ENST00000461071 HSP90AB1P08238 724 aaKnown RBP23.92■■□□□ 1.42
SLC39A1-208ENST00000461071 RC3H1Q5TC82 1133 aaKnown RBP23.92■■□□□ 1.42
SLC39A1-208ENST00000461071 DCAF5Q96JK2 942 aa23.92■■□□□ 1.42
SLC39A1-208ENST00000461071 C4AP0C0L4 1744 aa23.91■■□□□ 1.42
SLC39A1-208ENST00000461071 SLC4A9Q96Q91 983 aa23.91■■□□□ 1.42
SLC39A1-208ENST00000461071 MMP10P09238 476 aa23.9■■□□□ 1.42
SLC39A1-208ENST00000461071 ADRA2BP18089 450 aa23.9■■□□□ 1.42
SLC39A1-208ENST00000461071 TNNT2P45379 298 aaPredicted RBP23.9■■□□□ 1.42
SLC39A1-208ENST00000461071 SCN11AQ9UI33 1791 aa23.89■■□□□ 1.42
SLC39A1-208ENST00000461071 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
SLC39A1-208ENST00000461071 NLGN1Q8N2Q7 840 aa23.89■■□□□ 1.41
SLC39A1-208ENST00000461071 RTCBQ9Y3I0 505 aaKnown RBP23.89■■□□□ 1.41
SLC39A1-208ENST00000461071 PXDNLA1KZ92 1463 aa23.88■■□□□ 1.41
SLC39A1-208ENST00000461071 CNTNAP4Q9C0A0 1308 aa23.88■■□□□ 1.41
SLC39A1-208ENST00000461071 KDM6AO15550 1401 aaPredicted RBP23.88■■□□□ 1.41
SLC39A1-208ENST00000461071 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
SLC39A1-208ENST00000461071 ARFGEF1Q9Y6D6 1849 aa23.88■■□□□ 1.41
SLC39A1-208ENST00000461071 TGFB2P61812 414 aa23.87■■□□□ 1.41
SLC39A1-208ENST00000461071 AMOTQ4VCS5 1084 aa23.87■■□□□ 1.41
SLC39A1-208ENST00000461071 VIRMAQ69YN4 1812 aaKnown RBP23.87■■□□□ 1.41
SLC39A1-208ENST00000461071 C10orf71Q711Q0 1435 aa23.86■■□□□ 1.41
SLC39A1-208ENST00000461071 PANK3Q9H999 370 aa23.86■■□□□ 1.41
SLC39A1-208ENST00000461071 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
SLC39A1-208ENST00000461071 RPS6KA4O75676 772 aa23.84■■□□□ 1.41
SLC39A1-208ENST00000461071 ZNF530Q6P9A1 599 aaPredicted RBP23.84■■□□□ 1.41
SLC39A1-208ENST00000461071 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
SLC39A1-208ENST00000461071 POLR3GLQ9BT43 218 aa23.84■■□□□ 1.41
SLC39A1-208ENST00000461071 RBM42Q9BTD8 480 aaKnown RBP23.84■■□□□ 1.41
SLC39A1-208ENST00000461071 TJP1Q07157 1748 aa23.83■■□□□ 1.41
SLC39A1-208ENST00000461071 GYS1P13807 737 aa23.82■■□□□ 1.4
SLC39A1-208ENST00000461071 HSPA6P17066 643 aa23.82■■□□□ 1.4
SLC39A1-208ENST00000461071 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
SLC39A1-208ENST00000461071 HSPA5P11021 654 aaKnown RBP23.81■■□□□ 1.4
SLC39A1-208ENST00000461071 CABP4P57796 275 aa23.81■■□□□ 1.4
SLC39A1-208ENST00000461071 ADAMTS7Q9UKP4 1686 aa23.8■■□□□ 1.4
SLC39A1-208ENST00000461071 RFC4P35249 363 aa23.8■■□□□ 1.4
SLC39A1-208ENST00000461071 ZNF526Q8TF50 670 aaPredicted RBP23.8■■□□□ 1.4
SLC39A1-208ENST00000461071 KIF3CO14782 793 aa23.79■■□□□ 1.4
SLC39A1-208ENST00000461071 MTHFSP49914 203 aa23.79■■□□□ 1.4
SLC39A1-208ENST00000461071 AEBP1Q8IUX7 1158 aa23.79■■□□□ 1.4
SLC39A1-208ENST00000461071 CCDC87Q9NVE4 849 aa23.79■■□□□ 1.4
SLC39A1-208ENST00000461071 A0A0G2JLW4 131 aa23.78■■□□□ 1.4
SLC39A1-208ENST00000461071 MORC1Q86VD1 984 aa23.78■■□□□ 1.4
SLC39A1-208ENST00000461071 C1orf141Q5JVX7 400 aa23.77■■□□□ 1.4
SLC39A1-208ENST00000461071 SBF1O95248 1867 aa23.77■■□□□ 1.4
SLC39A1-208ENST00000461071 NFATC2IPQ8NCF5 419 aa23.76■■□□□ 1.39
SLC39A1-208ENST00000461071 PARP3Q9Y6F1 533 aa23.76■■□□□ 1.39
SLC39A1-208ENST00000461071 CRKLP46109 303 aaKnown RBP23.75■■□□□ 1.39
SLC39A1-208ENST00000461071 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
SLC39A1-208ENST00000461071 BCS1LQ9Y276 419 aa23.75■■□□□ 1.39
SLC39A1-208ENST00000461071 PTCD1O75127 700 aaKnown RBP23.74■■□□□ 1.39
SLC39A1-208ENST00000461071 DPEP1P16444 411 aa23.74■■□□□ 1.39
SLC39A1-208ENST00000461071 IL13P35225 146 aa23.74■■□□□ 1.39
SLC39A1-208ENST00000461071 IFFO2Q5TF58 517 aa23.74■■□□□ 1.39
SLC39A1-208ENST00000461071 SULT6B1Q6IMI4 303 aa23.74■■□□□ 1.39
SLC39A1-208ENST00000461071 KCNA3P22001 575 aa23.73■■□□□ 1.39
SLC39A1-208ENST00000461071 USP42Q9H9J4 1324 aaKnown RBP23.73■■□□□ 1.39
SLC39A1-208ENST00000461071 KNSTRNQ9Y448 316 aa23.72■■□□□ 1.39
SLC39A1-208ENST00000461071 AFDNP55196 1824 aaKnown RBP23.71■■□□□ 1.39
SLC39A1-208ENST00000461071 MRC1P22897 1456 aa23.71■■□□□ 1.39
SLC39A1-208ENST00000461071 ARHGAP27Q6ZUM4 889 aa23.7■■□□□ 1.38
SLC39A1-208ENST00000461071 FCHSD2O94868 740 aa23.69■■□□□ 1.38
SLC39A1-208ENST00000461071 AKAP4Q5JQC9 854 aa23.69■■□□□ 1.38
SLC39A1-208ENST00000461071 AMER1Q5JTC6 1135 aaPredicted RBP23.69■■□□□ 1.38
SLC39A1-208ENST00000461071 INTS5Q6P9B9 1019 aaKnown RBP23.69■■□□□ 1.38
SLC39A1-208ENST00000461071 TOMM70O94826 608 aa23.68■■□□□ 1.38
SLC39A1-208ENST00000461071 DDR1Q08345 913 aa23.68■■□□□ 1.38
SLC39A1-208ENST00000461071 FKBP8Q14318 412 aa23.68■■□□□ 1.38
SLC39A1-208ENST00000461071 PIM2Q9P1W9 311 aa23.68■■□□□ 1.38
SLC39A1-208ENST00000461071 SRP68Q9UHB9 627 aaKnown RBP23.68■■□□□ 1.38
SLC39A1-208ENST00000461071 UBR2Q8IWV8 1755 aa23.68■■□□□ 1.38
SLC39A1-208ENST00000461071 NRXN2Q9P2S2 1712 aa23.67■■□□□ 1.38
SLC39A1-208ENST00000461071 SLC52A2Q9HAB3 445 aa23.67■■□□□ 1.38
SLC39A1-208ENST00000461071 DLEC1Q9Y238 1755 aa23.67■■□□□ 1.38
SLC39A1-208ENST00000461071 TM4SF1P30408 202 aa23.66■■□□□ 1.38
SLC39A1-208ENST00000461071 APLP1P51693 650 aa23.65■■□□□ 1.38
SLC39A1-208ENST00000461071 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
SLC39A1-208ENST00000461071 DALRD3Q5D0E6 543 aaKnown RBP23.64■■□□□ 1.37
SLC39A1-208ENST00000461071 KCPQ6ZWJ8 1503 aa23.64■■□□□ 1.37
SLC39A1-208ENST00000461071 SOS1Q07889 1333 aaPredicted RBP23.63■■□□□ 1.37
SLC39A1-208ENST00000461071 DNAJC10Q8IXB1 793 aa23.63■■□□□ 1.37
SLC39A1-208ENST00000461071 LGR6Q9HBX8 967 aa23.63■■□□□ 1.37
SLC39A1-208ENST00000461071 CCDC88AQ3V6T2 1871 aa23.62■■□□□ 1.37
SLC39A1-208ENST00000461071 C9orf131Q5VYM1 1079 aa23.62■■□□□ 1.37
SLC39A1-208ENST00000461071 NMRK2Q9NPI5 230 aa23.62■■□□□ 1.37
SLC39A1-208ENST00000461071 TNRC6CQ9HCJ0 1690 aaKnown RBP23.62■■□□□ 1.37
SLC39A1-208ENST00000461071 WDR90Q96KV7 1748 aa23.62■■□□□ 1.37
SLC39A1-208ENST00000461071 RNMTO43148 476 aaKnown RBP23.61■■□□□ 1.37
SLC39A1-208ENST00000461071 ZPR1O75312 459 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms