RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
RAB11FIP3-207ENST00000461009 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
RAB11FIP3-207ENST00000461009 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
RAB11FIP3-207ENST00000461009 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
RAB11FIP3-207ENST00000461009 ATG3Q9NT62 314 aa17.73■□□□□ 0.43
RAB11FIP3-207ENST00000461009 KDRP35968 1356 aa17.71■□□□□ 0.43
RAB11FIP3-207ENST00000461009 TUBGCP6Q96RT7 1819 aa17.71■□□□□ 0.43
RAB11FIP3-207ENST00000461009 PHF14O94880 888 aa17.71■□□□□ 0.43
RAB11FIP3-207ENST00000461009 SSFA2P28290 1259 aa17.71■□□□□ 0.43
RAB11FIP3-207ENST00000461009 GPR162Q16538 588 aa17.71■□□□□ 0.43
RAB11FIP3-207ENST00000461009 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
RAB11FIP3-207ENST00000461009 TAF1LQ8IZX4 1826 aa17.7■□□□□ 0.42
RAB11FIP3-207ENST00000461009 C4BP0C0L5 1744 aa17.7■□□□□ 0.42
RAB11FIP3-207ENST00000461009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
RAB11FIP3-207ENST00000461009 U2SURPO15042 1029 aaKnown RBP17.7■□□□□ 0.42
RAB11FIP3-207ENST00000461009 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
RAB11FIP3-207ENST00000461009 GNPATO15228 680 aa17.69■□□□□ 0.42
RAB11FIP3-207ENST00000461009 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
RAB11FIP3-207ENST00000461009 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
RAB11FIP3-207ENST00000461009 HMOX1P09601 288 aa17.68■□□□□ 0.42
RAB11FIP3-207ENST00000461009 ITPK1Q13572 414 aa17.67■□□□□ 0.42
RAB11FIP3-207ENST00000461009 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
RAB11FIP3-207ENST00000461009 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
RAB11FIP3-207ENST00000461009 RTCBQ9Y3I0 505 aaKnown RBP17.67■□□□□ 0.42
RAB11FIP3-207ENST00000461009 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
RAB11FIP3-207ENST00000461009 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
RAB11FIP3-207ENST00000461009 TRAPPC3LQ5T215 181 aa17.66■□□□□ 0.42
RAB11FIP3-207ENST00000461009 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
RAB11FIP3-207ENST00000461009 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
RAB11FIP3-207ENST00000461009 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
RAB11FIP3-207ENST00000461009 PRKRIP1Q9H875 184 aaPredicted RBP17.65■□□□□ 0.42
RAB11FIP3-207ENST00000461009 CD2APQ9Y5K6 639 aa17.65■□□□□ 0.42
RAB11FIP3-207ENST00000461009 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
RAB11FIP3-207ENST00000461009 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
RAB11FIP3-207ENST00000461009 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
RAB11FIP3-207ENST00000461009 ADRA2BP18089 450 aa17.63■□□□□ 0.41
RAB11FIP3-207ENST00000461009 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
RAB11FIP3-207ENST00000461009 RFC4P35249 363 aa17.62■□□□□ 0.41
RAB11FIP3-207ENST00000461009 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
RAB11FIP3-207ENST00000461009 UBR3Q6ZT12 1888 aa17.62■□□□□ 0.41
RAB11FIP3-207ENST00000461009 FCHSD2O94868 740 aa17.61■□□□□ 0.41
RAB11FIP3-207ENST00000461009 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
RAB11FIP3-207ENST00000461009 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
RAB11FIP3-207ENST00000461009 RNMTO43148 476 aaKnown RBP17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 ANP32CO43423 234 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 NEFMP07197 916 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 AMIGO3Q86WK7 504 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 NLGN1Q8N2Q7 840 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 PNNQ9H307 717 aaKnown RBP17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
RAB11FIP3-207ENST00000461009 SMIM5Q71RC9 77 aa17.59■□□□□ 0.41
RAB11FIP3-207ENST00000461009 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
RAB11FIP3-207ENST00000461009 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
RAB11FIP3-207ENST00000461009 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
RAB11FIP3-207ENST00000461009 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
RAB11FIP3-207ENST00000461009 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
RAB11FIP3-207ENST00000461009 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
RAB11FIP3-207ENST00000461009 CHD4Q14839 1912 aa17.57■□□□□ 0.4
RAB11FIP3-207ENST00000461009 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
RAB11FIP3-207ENST00000461009 MMP10P09238 476 aa17.56■□□□□ 0.4
RAB11FIP3-207ENST00000461009 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
RAB11FIP3-207ENST00000461009 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
RAB11FIP3-207ENST00000461009 TEFQ10587 303 aa17.55■□□□□ 0.4
RAB11FIP3-207ENST00000461009 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
RAB11FIP3-207ENST00000461009 PARP3Q9Y6F1 533 aa17.54■□□□□ 0.4
RAB11FIP3-207ENST00000461009 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
RAB11FIP3-207ENST00000461009 VSIG10Q8N0Z9 540 aa17.53■□□□□ 0.4
RAB11FIP3-207ENST00000461009 ZNF784Q8NCA9 323 aaPredicted RBP17.53■□□□□ 0.4
RAB11FIP3-207ENST00000461009 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
RAB11FIP3-207ENST00000461009 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
RAB11FIP3-207ENST00000461009 ZPR1O75312 459 aa17.52■□□□□ 0.4
RAB11FIP3-207ENST00000461009 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
RAB11FIP3-207ENST00000461009 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
RAB11FIP3-207ENST00000461009 MRC1P22897 1456 aa17.51■□□□□ 0.39
RAB11FIP3-207ENST00000461009 STARD3NLO95772 234 aa17.51■□□□□ 0.39
RAB11FIP3-207ENST00000461009 GYS1P13807 737 aa17.51■□□□□ 0.39
RAB11FIP3-207ENST00000461009 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
RAB11FIP3-207ENST00000461009 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
RAB11FIP3-207ENST00000461009 TGFB2P61812 414 aa17.5■□□□□ 0.39
RAB11FIP3-207ENST00000461009 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
RAB11FIP3-207ENST00000461009 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
RAB11FIP3-207ENST00000461009 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
RAB11FIP3-207ENST00000461009 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
RAB11FIP3-207ENST00000461009 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
RAB11FIP3-207ENST00000461009 NPM2Q86SE8 214 aaKnown RBP17.48■□□□□ 0.39
RAB11FIP3-207ENST00000461009 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
RAB11FIP3-207ENST00000461009 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
RAB11FIP3-207ENST00000461009 VIRMAQ69YN4 1812 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP3-207ENST00000461009 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP3-207ENST00000461009 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
RAB11FIP3-207ENST00000461009 MYH14Q7Z406 1995 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP3-207ENST00000461009 CICQ96RK0 1608 aaPredicted RBP17.47■□□□□ 0.39
RAB11FIP3-207ENST00000461009 A0A087WZG4 1122 aa17.46■□□□□ 0.39
RAB11FIP3-207ENST00000461009 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
RAB11FIP3-207ENST00000461009 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
RAB11FIP3-207ENST00000461009 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
RAB11FIP3-207ENST00000461009 TJP1Q07157 1748 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms