RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 SLIT2O94813 1529 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 OVOS2A0A0J9YW53 1432 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 OVOS2Q6IE36 1432 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 CNGB1Q14028 1251 aaPredicted RBP10.04□□□□□ -0.8
RTN4-212ENST00000461004 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
RTN4-212ENST00000461004 COG3Q96JB2 828 aa10.04□□□□□ -0.8
RTN4-212ENST00000461004 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
RTN4-212ENST00000461004 CPDO75976 1380 aa10.03□□□□□ -0.8
RTN4-212ENST00000461004 PER1O15534 1290 aaPredicted RBP10.03□□□□□ -0.8
RTN4-212ENST00000461004 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
RTN4-212ENST00000461004 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
RTN4-212ENST00000461004 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
RTN4-212ENST00000461004 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
RTN4-212ENST00000461004 TYW1BQ6NUM6 668 aa10.03□□□□□ -0.8
RTN4-212ENST00000461004 KCNH5Q8NCM2 988 aa10.03□□□□□ -0.8
RTN4-212ENST00000461004 EPAS1Q99814 870 aa10.03□□□□□ -0.8
RTN4-212ENST00000461004 STRN4Q9NRL3 753 aa10.03□□□□□ -0.8
RTN4-212ENST00000461004 CAMTA1Q9Y6Y1 1673 aa10.02□□□□□ -0.8
RTN4-212ENST00000461004 NFAT5O94916 1531 aa10.02□□□□□ -0.8
RTN4-212ENST00000461004 ATRNO75882 1429 aa10.02□□□□□ -0.81
RTN4-212ENST00000461004 ZMYND10O75800 440 aa10.02□□□□□ -0.81
RTN4-212ENST00000461004 TNNT2P45379 298 aaPredicted RBP10.02□□□□□ -0.81
RTN4-212ENST00000461004 LARP1Q6PKG0 1096 aaKnown RBP10.02□□□□□ -0.81
RTN4-212ENST00000461004 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
RTN4-212ENST00000461004 TRPC5Q9UL62 973 aaPredicted RBP10.02□□□□□ -0.81
RTN4-212ENST00000461004 RXRBP28702 533 aa10.01□□□□□ -0.81
RTN4-212ENST00000461004 VPS72Q15906 364 aa10.01□□□□□ -0.81
RTN4-212ENST00000461004 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
RTN4-212ENST00000461004 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
RTN4-212ENST00000461004 KNSTRNQ9Y448 316 aa10.01□□□□□ -0.81
RTN4-212ENST00000461004 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
RTN4-212ENST00000461004 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
RTN4-212ENST00000461004 MAP3K19Q56UN5 1328 aa10.01□□□□□ -0.81
RTN4-212ENST00000461004 COL14A1Q05707 1796 aaKnown RBP10.01□□□□□ -0.81
RTN4-212ENST00000461004 USP54Q70EL1 1684 aa10□□□□□ -0.81
RTN4-212ENST00000461004 EVA1CP58658 441 aa10□□□□□ -0.81
RTN4-212ENST00000461004 RBM6P78332 1123 aaKnown RBP10□□□□□ -0.81
RTN4-212ENST00000461004 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
RTN4-212ENST00000461004 COL18A1P39060 1754 aa10□□□□□ -0.81
RTN4-212ENST00000461004 AATKQ6ZMQ8 1374 aa10□□□□□ -0.81
RTN4-212ENST00000461004 LMO7Q8WWI1 1683 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 MAP3K7O43318 606 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 DDX10Q13206 875 aaKnown RBP9.99□□□□□ -0.81
RTN4-212ENST00000461004 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
RTN4-212ENST00000461004 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 FAM163AQ96GL9 167 aaPredicted RBP9.99□□□□□ -0.81
RTN4-212ENST00000461004 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 EMILIN1Q9Y6C2 1016 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 NRAPQ86VF7 1730 aa9.99□□□□□ -0.81
RTN4-212ENST00000461004 KIF20BQ96Q89 1820 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 PTGDRQ13258 359 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 MORC1Q86VD1 984 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 IP6K1Q92551 441 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 FBXW7Q969H0 707 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 LTV1Q96GA3 475 aaPredicted RBP9.98□□□□□ -0.81
RTN4-212ENST00000461004 SPATA31A5Q5VU36 1347 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 SPATA31A7Q8IWB4 1347 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 RGPD5Q99666 1765 aa9.98□□□□□ -0.81
RTN4-212ENST00000461004 COL5A2P05997 1499 aaPredicted RBP9.98□□□□□ -0.81
RTN4-212ENST00000461004 GLI3P10071 1580 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 NWD2Q9ULI1 1742 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
RTN4-212ENST00000461004 FECHP22830 423 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 HOXC9P31274 260 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 AMPHP49418 695 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
RTN4-212ENST00000461004 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 ANKRD24Q8TF21 1146 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 POLKQ9UBT6 870 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 SPATA31A1Q5TZJ5 1347 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 RGS12O14924 1447 aa9.97□□□□□ -0.81
RTN4-212ENST00000461004 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
RTN4-212ENST00000461004 TOM1L2Q6ZVM7 507 aa9.96□□□□□ -0.82
RTN4-212ENST00000461004 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.96□□□□□ -0.82
RTN4-212ENST00000461004 LTN1O94822 1766 aa9.96□□□□□ -0.82
RTN4-212ENST00000461004 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 POTEBQ6S5H4 581 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 SLC24A3Q9HC58 644 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 WDR17Q8IZU2 1322 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 PEAK1Q9H792 1746 aa9.95□□□□□ -0.82
RTN4-212ENST00000461004 ERBB3P21860 1342 aa9.94□□□□□ -0.82
RTN4-212ENST00000461004 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
RTN4-212ENST00000461004 FCHSD2O94868 740 aa9.94□□□□□ -0.82
RTN4-212ENST00000461004 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
RTN4-212ENST00000461004 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
RTN4-212ENST00000461004 CRB1P82279 1406 aa9.93□□□□□ -0.82
RTN4-212ENST00000461004 NSD2O96028 1365 aa9.93□□□□□ -0.82
RTN4-212ENST00000461004 VARS2Q5ST30 1063 aaKnown RBP9.93□□□□□ -0.82
RTN4-212ENST00000461004 FAM182BQ5T319 152 aa9.93□□□□□ -0.82
RTN4-212ENST00000461004 TCP11L2Q8N4U5 519 aa9.93□□□□□ -0.82
RTN4-212ENST00000461004 USHBP1Q8N6Y0 703 aa9.93□□□□□ -0.82
RTN4-212ENST00000461004 CARD10Q9BWT7 1032 aa9.93□□□□□ -0.82
RTN4-212ENST00000461004 MAP2P11137 1827 aaKnown RBP9.92□□□□□ -0.82
RTN4-212ENST00000461004 A0A0G2JS52 829 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 COL9A1P20849 921 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms