RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GNRH1P01148 92 aa8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 SUZ12Q15022 739 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 NBPF10Q6P3W6 841 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 NBPF15Q8N660 670 aa8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
ATPAF1-203ENST00000460928 WDR62O43379 1518 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 H7C1W4 665 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 POU4F2Q12837 409 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 DBN1Q16643 649 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 FOXR1Q6PIV2 292 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 MRC2Q9UBG0 1479 aa8.04□□□□□ -1.12
ATPAF1-203ENST00000460928 ABCC8Q09428 1581 aa8.03□□□□□ -1.12
ATPAF1-203ENST00000460928 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-203ENST00000460928 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
ATPAF1-203ENST00000460928 PRM3Q9NNZ6 103 aa8.03□□□□□ -1.12
ATPAF1-203ENST00000460928 MYCP01106 439 aaPredicted RBP8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 LYPD4Q6UWN0 246 aa8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 RIPOR1Q6ZS17 1223 aa8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 TAS1R3Q7RTX0 852 aa8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 ZMYND15Q9H091 742 aa8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 HRH3Q9Y5N1 445 aa8.02□□□□□ -1.13
ATPAF1-203ENST00000460928 WASLO00401 505 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-203ENST00000460928 IL2RAP01589 272 aa8.01□□□□□ -1.13
ATPAF1-203ENST00000460928 CELA2BP08218 269 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-203ENST00000460928 EIF4G2P78344 907 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATPAF1-203ENST00000460928 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
ATPAF1-203ENST00000460928 CDCA7Q9BWT1 371 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-203ENST00000460928 ARAP1Q96P48 1450 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 F11P03951 625 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 MAP3K10Q02779 954 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 CENPCQ03188 943 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 IRF5Q13568 498 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 PHTF2Q8N3S3 785 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 XAGE2Q96GT9 111 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 GAS2L1Q99501 681 aaPredicted RBP8□□□□□ -1.13
ATPAF1-203ENST00000460928 TIMMDC1Q9NPL8 285 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 RAB6BQ9NRW1 208 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 CHIC2Q9UKJ5 165 aa8□□□□□ -1.13
ATPAF1-203ENST00000460928 IGF1RP08069 1367 aa7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 GPR25O00155 361 aa7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 KANK3Q6NY19 840 aa7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 GTPBP3Q969Y2 492 aaKnown RBP7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 SCARF2Q96GP6 870 aaPredicted RBP7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 TRERF1Q96PN7 1200 aa7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
ATPAF1-203ENST00000460928 CUX1P39880 1505 aa7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 ESCO1Q5FWF5 840 aa7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 NUCKS1Q9H1E3 243 aaKnown RBP7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 ENAMQ9NRM1 1142 aa7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 LRRC4BQ9NT99 713 aa7.98□□□□□ -1.13
ATPAF1-203ENST00000460928 USP4Q13107 963 aa7.97□□□□□ -1.13
ATPAF1-203ENST00000460928 ZSCAN10Q96SZ4 725 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-203ENST00000460928 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
ATPAF1-203ENST00000460928 DNMT3AQ9Y6K1 912 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-203ENST00000460928 RAD54L2Q9Y4B4 1467 aa7.96□□□□□ -1.13
ATPAF1-203ENST00000460928 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
ATPAF1-203ENST00000460928 IRS1P35568 1242 aa7.96□□□□□ -1.14
ATPAF1-203ENST00000460928 LBRQ14739 615 aaKnown RBP7.96□□□□□ -1.14
ATPAF1-203ENST00000460928 SLFNL1Q499Z3 407 aa7.96□□□□□ -1.14
ATPAF1-203ENST00000460928 NSFL1CQ9UNZ2 370 aaKnown RBP7.96□□□□□ -1.14
ATPAF1-203ENST00000460928 SYNJ1O43426 1573 aa7.96□□□□□ -1.14
ATPAF1-203ENST00000460928 THBS1P07996 1170 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 BCRP11274 1271 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 MX2P20592 715 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 RNF135Q8IUD6 432 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 CFHR5Q9BXR6 569 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 DNMBPQ6XZF7 1577 aa7.95□□□□□ -1.14
ATPAF1-203ENST00000460928 IGHA1P01876 353 aa7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 TSGA10IPQ3SY00 556 aa7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 ACDQ96AP0 544 aa7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 WRNQ14191 1432 aaPredicted RBP eCLIP7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 FGD5Q6ZNL6 1462 aa7.94□□□□□ -1.14
ATPAF1-203ENST00000460928 ZNF608Q9ULD9 1512 aaPredicted RBP7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 FOXK2Q01167 660 aa7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 WASHC4Q2M389 1173 aa7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 C4orf17Q53FE4 359 aa7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 TMEM214Q6NUQ4 689 aaKnown RBP7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 RHBDD1Q8TEB9 315 aa7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 ETNK1Q9HBU6 452 aa7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 POLA1P09884 1462 aaPredicted RBP7.93□□□□□ -1.14
ATPAF1-203ENST00000460928 MAP2K3P46734 347 aa7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 UBAP2LQ14157 1087 aaKnown RBP7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 MAP7D1Q3KQU3 841 aa7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 PPARGC1BQ86YN6 1023 aaKnown RBP7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 PHF24Q9UPV7 400 aa7.92□□□□□ -1.14
ATPAF1-203ENST00000460928 PHF20L1A8MW92 1017 aa7.91□□□□□ -1.14
ATPAF1-203ENST00000460928 SOX11P35716 441 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms