RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 FRMPD1Q5SYB0 1578 aa8.59□□□□□ -1.03
PTPN12-209ENST00000460731 RICTORQ6R327 1708 aa8.59□□□□□ -1.03
PTPN12-209ENST00000460731 PTPRKQ15262 1439 aa8.58□□□□□ -1.04
PTPN12-209ENST00000460731 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
PTPN12-209ENST00000460731 RNF225M0QZC1 329 aaPredicted RBP8.58□□□□□ -1.04
PTPN12-209ENST00000460731 FSHRP23945 695 aa8.58□□□□□ -1.04
PTPN12-209ENST00000460731 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
PTPN12-209ENST00000460731 CABLES1Q8TDN4 633 aa8.58□□□□□ -1.04
PTPN12-209ENST00000460731 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
PTPN12-209ENST00000460731 SYCP2Q9BX26 1530 aa8.58□□□□□ -1.04
PTPN12-209ENST00000460731 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 SHANK2Q9UPX8 1470 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 DAPK1P53355 1430 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 SLURP2P0DP57 97 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 RNFT1Q5M7Z0 435 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 RIC3Q7Z5B4 369 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 COL25A1Q9BXS0 654 aaPredicted RBP8.57□□□□□ -1.04
PTPN12-209ENST00000460731 DNMT1P26358 1616 aaKnown RBP8.57□□□□□ -1.04
PTPN12-209ENST00000460731 ROCK1Q13464 1354 aa8.57□□□□□ -1.04
PTPN12-209ENST00000460731 MAST1Q9Y2H9 1570 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 NCOA1Q15788 1441 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 ARHGEF15O94989 841 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 TSPY4P0CV99 314 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 TSPY10P0CW01 314 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 Q6ZVU0 165 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 PARP9Q8IXQ6 854 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 ARMC2Q8NEN0 867 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
PTPN12-209ENST00000460731 SPAG9O60271 1321 aaKnown RBP8.55□□□□□ -1.04
PTPN12-209ENST00000460731 KDM6BO15054 1643 aa8.55□□□□□ -1.04
PTPN12-209ENST00000460731 FAM50AQ14320 339 aaKnown RBP8.55□□□□□ -1.04
PTPN12-209ENST00000460731 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
PTPN12-209ENST00000460731 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
PTPN12-209ENST00000460731 KIDINS220Q9ULH0 1771 aa8.54□□□□□ -1.04
PTPN12-209ENST00000460731 INO80Q9ULG1 1556 aaPredicted RBP8.54□□□□□ -1.04
PTPN12-209ENST00000460731 SLC35F4A4IF30 521 aa8.54□□□□□ -1.04
PTPN12-209ENST00000460731 SPINT1O43278 529 aa8.54□□□□□ -1.04
PTPN12-209ENST00000460731 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
PTPN12-209ENST00000460731 CCDC155Q8N6L0 562 aa8.54□□□□□ -1.04
PTPN12-209ENST00000460731 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
PTPN12-209ENST00000460731 REREQ9P2R6 1566 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 ATP10AO60312 1499 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 QPCTQ16769 361 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 NBPF14Q5TI25 921 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-209ENST00000460731 ZFYVE16Q7Z3T8 1539 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 YEATS2Q9ULM3 1422 aa8.53□□□□□ -1.04
PTPN12-209ENST00000460731 DHX29Q7Z478 1369 aaKnown RBP8.52□□□□□ -1.05
PTPN12-209ENST00000460731 ANKRD30AQ9BXX3 1397 aa8.52□□□□□ -1.05
PTPN12-209ENST00000460731 TRIM26Q12899 539 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-209ENST00000460731 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
PTPN12-209ENST00000460731 ATP7AQ04656 1500 aa8.52□□□□□ -1.05
PTPN12-209ENST00000460731 CROCC2H7BZ55 1655 aa8.52□□□□□ -1.05
PTPN12-209ENST00000460731 PLXNC1O60486 1568 aa8.52□□□□□ -1.05
PTPN12-209ENST00000460731 HECW2Q9P2P5 1572 aa8.52□□□□□ -1.05
PTPN12-209ENST00000460731 AGLP35573 1532 aa8.51□□□□□ -1.05
PTPN12-209ENST00000460731 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
PTPN12-209ENST00000460731 LILRB3O75022 631 aa8.51□□□□□ -1.05
PTPN12-209ENST00000460731 CBLBQ13191 982 aa8.51□□□□□ -1.05
PTPN12-209ENST00000460731 PPP1R26Q5T8A7 1209 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-209ENST00000460731 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
PTPN12-209ENST00000460731 LIMD1Q9UGP4 676 aa8.51□□□□□ -1.05
PTPN12-209ENST00000460731 HFM1A2PYH4 1435 aa8.5□□□□□ -1.05
PTPN12-209ENST00000460731 IGHA1P01876 353 aa8.5□□□□□ -1.05
PTPN12-209ENST00000460731 ITGA6P23229 1130 aa8.5□□□□□ -1.05
PTPN12-209ENST00000460731 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
PTPN12-209ENST00000460731 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
PTPN12-209ENST00000460731 DIP2CQ9Y2E4 1556 aa8.5□□□□□ -1.05
PTPN12-209ENST00000460731 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
PTPN12-209ENST00000460731 NAIPQ13075 1403 aa8.49□□□□□ -1.05
PTPN12-209ENST00000460731 MYSM1Q5VVJ2 828 aa8.49□□□□□ -1.05
PTPN12-209ENST00000460731 GPKOWQ92917 476 aaPredicted RBP eCLIP8.49□□□□□ -1.05
PTPN12-209ENST00000460731 A2MP01023 1474 aa8.49□□□□□ -1.05
PTPN12-209ENST00000460731 DUOX2Q9NRD8 1548 aa8.49□□□□□ -1.05
PTPN12-209ENST00000460731 BCORL1Q5H9F3 1711 aa8.49□□□□□ -1.05
PTPN12-209ENST00000460731 KIF15Q9NS87 1388 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 ABCA6Q8N139 1617 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 TRIM66O15016 1216 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 IRS1P35568 1242 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 RRP7BPQ9NSQ0 103 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 PGPEP1Q9NXJ5 209 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
PTPN12-209ENST00000460731 ACIN1Q9UKV3 1341 aaKnown RBP8.48□□□□□ -1.05
PTPN12-209ENST00000460731 ERBINQ96RT1 1412 aa8.47□□□□□ -1.05
PTPN12-209ENST00000460731 ADGBQ8N7X0 1667 aa8.47□□□□□ -1.05
PTPN12-209ENST00000460731 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
PTPN12-209ENST00000460731 ANKRD50Q9ULJ7 1429 aa8.46□□□□□ -1.05
PTPN12-209ENST00000460731 SENP3-EIF4A1A0A087X0R7 540 aa8.46□□□□□ -1.06
PTPN12-209ENST00000460731 GPAT2Q6NUI2 795 aa8.46□□□□□ -1.06
PTPN12-209ENST00000460731 SV2AQ7L0J3 742 aa8.46□□□□□ -1.06
PTPN12-209ENST00000460731 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
PTPN12-209ENST00000460731 FOXK2Q01167 660 aa8.45□□□□□ -1.06
PTPN12-209ENST00000460731 RTL5Q5HYW3 569 aaPredicted RBP8.45□□□□□ -1.06
PTPN12-209ENST00000460731 TSC1Q92574 1164 aa8.45□□□□□ -1.06
PTPN12-209ENST00000460731 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
PTPN12-209ENST00000460731 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms