RNA–Protein interactions for RNA: ENST00000460405.5

LDHA-207, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-207ENST00000460405 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
LDHA-207ENST00000460405 LINC00116Q8NCU8 138 aa13.76□□□□□ -0.21
LDHA-207ENST00000460405 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
LDHA-207ENST00000460405 ITPK1Q13572 414 aa13.75□□□□□ -0.21
LDHA-207ENST00000460405 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
LDHA-207ENST00000460405 GNPATO15228 680 aa13.74□□□□□ -0.21
LDHA-207ENST00000460405 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
LDHA-207ENST00000460405 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
LDHA-207ENST00000460405 UTRNP46939 3433 aa13.73□□□□□ -0.21
LDHA-207ENST00000460405 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
LDHA-207ENST00000460405 AMIGO3Q86WK7 504 aa13.73□□□□□ -0.21
LDHA-207ENST00000460405 NFATC2IPQ8NCF5 419 aa13.73□□□□□ -0.21
LDHA-207ENST00000460405 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
LDHA-207ENST00000460405 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
LDHA-207ENST00000460405 QSER1Q2KHR3 1735 aa13.73□□□□□ -0.21
LDHA-207ENST00000460405 KDRP35968 1356 aa13.72□□□□□ -0.21
LDHA-207ENST00000460405 GRIN3BO60391 1043 aa13.72□□□□□ -0.21
LDHA-207ENST00000460405 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
LDHA-207ENST00000460405 TRAPPC3LQ5T215 181 aa13.72□□□□□ -0.21
LDHA-207ENST00000460405 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
LDHA-207ENST00000460405 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
LDHA-207ENST00000460405 HMOX1P09601 288 aa13.71□□□□□ -0.21
LDHA-207ENST00000460405 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
LDHA-207ENST00000460405 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
LDHA-207ENST00000460405 ZNF784Q8NCA9 323 aaPredicted RBP13.71□□□□□ -0.21
LDHA-207ENST00000460405 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
LDHA-207ENST00000460405 ITGB4P16144 1822 aa13.7□□□□□ -0.22
LDHA-207ENST00000460405 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
LDHA-207ENST00000460405 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
LDHA-207ENST00000460405 NLGN1Q8N2Q7 840 aa13.69□□□□□ -0.22
LDHA-207ENST00000460405 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
LDHA-207ENST00000460405 C4BP0C0L5 1744 aa13.69□□□□□ -0.22
LDHA-207ENST00000460405 C5P01031 1676 aa13.69□□□□□ -0.22
LDHA-207ENST00000460405 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
LDHA-207ENST00000460405 RFC4P35249 363 aa13.68□□□□□ -0.22
LDHA-207ENST00000460405 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
LDHA-207ENST00000460405 CNTNAP4Q9C0A0 1308 aa13.67□□□□□ -0.22
LDHA-207ENST00000460405 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
LDHA-207ENST00000460405 YBX3P16989 372 aaKnown RBP eCLIP13.67□□□□□ -0.221e-29■■□□□ 12.5
LDHA-207ENST00000460405 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
LDHA-207ENST00000460405 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
LDHA-207ENST00000460405 TUBGCP6Q96RT7 1819 aa13.67□□□□□ -0.22
LDHA-207ENST00000460405 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
LDHA-207ENST00000460405 MMP10P09238 476 aa13.66□□□□□ -0.22
LDHA-207ENST00000460405 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
LDHA-207ENST00000460405 COL24A1Q17RW2 1714 aa13.66□□□□□ -0.22
LDHA-207ENST00000460405 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
LDHA-207ENST00000460405 CRKLP46109 303 aaKnown RBP13.65□□□□□ -0.22
LDHA-207ENST00000460405 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
LDHA-207ENST00000460405 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
LDHA-207ENST00000460405 GYS1P13807 737 aa13.63□□□□□ -0.23
LDHA-207ENST00000460405 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
LDHA-207ENST00000460405 TGFB2P61812 414 aa13.62□□□□□ -0.23
LDHA-207ENST00000460405 SLC39A6Q13433 755 aa13.62□□□□□ -0.23
LDHA-207ENST00000460405 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
LDHA-207ENST00000460405 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
LDHA-207ENST00000460405 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
LDHA-207ENST00000460405 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
LDHA-207ENST00000460405 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
LDHA-207ENST00000460405 CCDC87Q9NVE4 849 aa13.61□□□□□ -0.23
LDHA-207ENST00000460405 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
LDHA-207ENST00000460405 ZPR1O75312 459 aa13.6□□□□□ -0.23
LDHA-207ENST00000460405 TEFQ10587 303 aa13.6□□□□□ -0.23
LDHA-207ENST00000460405 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
LDHA-207ENST00000460405 VSIG10Q8N0Z9 540 aa13.6□□□□□ -0.23
LDHA-207ENST00000460405 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
LDHA-207ENST00000460405 CYP19A1P11511 503 aaPredicted RBP13.59□□□□□ -0.23
LDHA-207ENST00000460405 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
LDHA-207ENST00000460405 STARD3NLO95772 234 aa13.58□□□□□ -0.24
LDHA-207ENST00000460405 PPP2R1AP30153 589 aa13.58□□□□□ -0.24
LDHA-207ENST00000460405 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
LDHA-207ENST00000460405 SRP68Q9UHB9 627 aaKnown RBP13.58□□□□□ -0.24
LDHA-207ENST00000460405 CHD4Q14839 1912 aa13.58□□□□□ -0.24
LDHA-207ENST00000460405 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
LDHA-207ENST00000460405 ZNF831Q5JPB2 1677 aa13.57□□□□□ -0.24
LDHA-207ENST00000460405 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
LDHA-207ENST00000460405 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
LDHA-207ENST00000460405 C1QTNF8P60827 252 aa13.57□□□□□ -0.24
LDHA-207ENST00000460405 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
LDHA-207ENST00000460405 FKBP8Q14318 412 aa13.57□□□□□ -0.24
LDHA-207ENST00000460405 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
LDHA-207ENST00000460405 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
LDHA-207ENST00000460405 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
LDHA-207ENST00000460405 FCHSD2O94868 740 aa13.56□□□□□ -0.24
LDHA-207ENST00000460405 ZNF790Q6PG37 636 aa13.56□□□□□ -0.24
LDHA-207ENST00000460405 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
LDHA-207ENST00000460405 BCS1LQ9Y276 419 aa13.56□□□□□ -0.24
LDHA-207ENST00000460405 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
LDHA-207ENST00000460405 DPEP1P16444 411 aa13.55□□□□□ -0.24
LDHA-207ENST00000460405 USPL1Q5W0Q7 1092 aa13.55□□□□□ -0.24
LDHA-207ENST00000460405 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
LDHA-207ENST00000460405 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
LDHA-207ENST00000460405 ZBTB1Q9Y2K1 713 aa13.55□□□□□ -0.24
LDHA-207ENST00000460405 SOS1Q07889 1333 aaPredicted RBP13.55□□□□□ -0.24
LDHA-207ENST00000460405 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
LDHA-207ENST00000460405 TM4SF1P30408 202 aa13.54□□□□□ -0.24
LDHA-207ENST00000460405 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
LDHA-207ENST00000460405 MRC1P22897 1456 aa13.54□□□□□ -0.24
LDHA-207ENST00000460405 A0A087WZG4 1122 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms