RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 ARHGAP45Q92619 1136 aa28.55■■■□□ 2.16
LCNL1-203ENST00000460177 CYP27B1O15528 508 aa28.54■■■□□ 2.16
LCNL1-203ENST00000460177 SOS1Q07889 1333 aaPredicted RBP28.53■■■□□ 2.16
LCNL1-203ENST00000460177 JCADQ9P266 1359 aa28.52■■■□□ 2.16
LCNL1-203ENST00000460177 IL2RBP14784 551 aa28.52■■■□□ 2.16
LCNL1-203ENST00000460177 CACNA1FO60840 1977 aa28.51■■■□□ 2.15
LCNL1-203ENST00000460177 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
LCNL1-203ENST00000460177 NWD2Q9ULI1 1742 aa28.51■■■□□ 2.15
LCNL1-203ENST00000460177 NUTM2BA6NNL0 878 aaPredicted RBP28.49■■■□□ 2.15
LCNL1-203ENST00000460177 NUTM2EB1AL46 878 aaPredicted RBP28.49■■■□□ 2.15
LCNL1-203ENST00000460177 EIF4A1P60842 406 aaKnown RBP28.49■■■□□ 2.15
LCNL1-203ENST00000460177 AAMPQ13685 434 aa28.49■■■□□ 2.15
LCNL1-203ENST00000460177 NUTM2AQ8IVF1 878 aaPredicted RBP28.49■■■□□ 2.15
LCNL1-203ENST00000460177 PCDH11XQ9BZA7 1347 aa28.49■■■□□ 2.15
LCNL1-203ENST00000460177 PCDH11YQ9BZA8 1340 aa28.49■■■□□ 2.15
LCNL1-203ENST00000460177 TMEM57Q8N5G2 664 aa28.49■■■□□ 2.15
LCNL1-203ENST00000460177 RGS12O14924 1447 aa28.48■■■□□ 2.15
LCNL1-203ENST00000460177 KCNQ3O43525 872 aa28.48■■■□□ 2.15
LCNL1-203ENST00000460177 ZCRB1Q8TBF4 217 aaKnown RBP28.48■■■□□ 2.15
LCNL1-203ENST00000460177 ABCC4O15439 1325 aa28.48■■■□□ 2.15
LCNL1-203ENST00000460177 DISP2A7MBM2 1401 aa28.48■■■□□ 2.15
LCNL1-203ENST00000460177 HSP90AB1P08238 724 aaKnown RBP28.47■■■□□ 2.15
LCNL1-203ENST00000460177 DCAF5Q96JK2 942 aa28.47■■■□□ 2.15
LCNL1-203ENST00000460177 KDM2BQ8NHM5 1336 aa28.47■■■□□ 2.15
LCNL1-203ENST00000460177 ADAMTS2O95450 1211 aa28.46■■■□□ 2.15
LCNL1-203ENST00000460177 ITPRIPQ8IWB1 547 aa28.46■■■□□ 2.15
LCNL1-203ENST00000460177 API5Q9BZZ5 524 aaKnown RBP28.46■■■□□ 2.15
LCNL1-203ENST00000460177 SLC52A2Q9HAB3 445 aa28.46■■■□□ 2.15
LCNL1-203ENST00000460177 DDX19BQ9UMR2 479 aa28.45■■■□□ 2.14
LCNL1-203ENST00000460177 HOXB7P09629 217 aa28.43■■■□□ 2.14
LCNL1-203ENST00000460177 HEG1Q9ULI3 1381 aa28.43■■■□□ 2.14
LCNL1-203ENST00000460177 PTPRCP08575 1304 aa28.43■■■□□ 2.14
LCNL1-203ENST00000460177 CCDC30Q5VVM6 783 aa28.43■■■□□ 2.14
LCNL1-203ENST00000460177 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
LCNL1-203ENST00000460177 TOGARAM1Q9Y4F4 1720 aa28.42■■■□□ 2.14
LCNL1-203ENST00000460177 SLC4A2P04920 1241 aa28.42■■■□□ 2.14
LCNL1-203ENST00000460177 SLIT2O94813 1529 aa28.41■■■□□ 2.14
LCNL1-203ENST00000460177 C5P01031 1676 aa28.41■■■□□ 2.14
LCNL1-203ENST00000460177 STK31Q9BXU1 1019 aa28.41■■■□□ 2.14
LCNL1-203ENST00000460177 CENPQQ7L2Z9 268 aaPredicted RBP28.4■■■□□ 2.14
LCNL1-203ENST00000460177 LRP6O75581 1613 aa28.39■■■□□ 2.14
LCNL1-203ENST00000460177 PAPPAQ13219 1627 aa28.39■■■□□ 2.14
LCNL1-203ENST00000460177 HDGFL1Q5TGJ6 251 aa28.39■■■□□ 2.14
LCNL1-203ENST00000460177 N4BP2Q86UW6 1770 aaPredicted RBP28.39■■■□□ 2.14
LCNL1-203ENST00000460177 NKX1-1Q15270 411 aaPredicted RBP28.38■■■□□ 2.13
LCNL1-203ENST00000460177 G2E3Q7L622 706 aa28.38■■■□□ 2.13
LCNL1-203ENST00000460177 NFATC2IPQ8NCF5 419 aa28.38■■■□□ 2.13
LCNL1-203ENST00000460177 SPATA31A6Q5VVP1 1343 aa28.38■■■□□ 2.13
LCNL1-203ENST00000460177 NECTIN2Q92692 538 aa28.38■■■□□ 2.13
LCNL1-203ENST00000460177 GLI3P10071 1580 aa28.37■■■□□ 2.13
LCNL1-203ENST00000460177 PCDHB15Q9Y5E8 787 aa28.37■■■□□ 2.13
LCNL1-203ENST00000460177 ZNF790Q6PG37 636 aa28.36■■■□□ 2.13
LCNL1-203ENST00000460177 UBR2Q8IWV8 1755 aa28.36■■■□□ 2.13
LCNL1-203ENST00000460177 GIGYF1O75420 1035 aaPredicted RBP28.34■■■□□ 2.13
LCNL1-203ENST00000460177 CABP4P57796 275 aa28.34■■■□□ 2.13
LCNL1-203ENST00000460177 SLC39A6Q13433 755 aa28.34■■■□□ 2.13
LCNL1-203ENST00000460177 FBXO41Q8TF61 875 aa28.34■■■□□ 2.13
LCNL1-203ENST00000460177 ZBTB40Q9NUA8 1239 aa28.34■■■□□ 2.13
LCNL1-203ENST00000460177 DDX54Q8TDD1 881 aaKnown RBP28.33■■■□□ 2.13
LCNL1-203ENST00000460177 LAMB4A4D0S4 1761 aa28.32■■■□□ 2.12
LCNL1-203ENST00000460177 TNS2Q63HR2 1409 aa28.32■■■□□ 2.12
LCNL1-203ENST00000460177 IGHDP01880 384 aa28.32■■■□□ 2.12
LCNL1-203ENST00000460177 FLIIQ13045 1269 aa28.32■■■□□ 2.12
LCNL1-203ENST00000460177 INTS3Q68E01 1043 aaKnown RBP28.32■■■□□ 2.12
LCNL1-203ENST00000460177 CHMP4AQ9BY43 222 aa28.32■■■□□ 2.12
LCNL1-203ENST00000460177 SPATA31A1Q5TZJ5 1347 aa28.32■■■□□ 2.12
LCNL1-203ENST00000460177 EIF2S2P20042 333 aaKnown RBP28.32■■■□□ 2.12
LCNL1-203ENST00000460177 ERVV-2B6SEH9 535 aa28.31■■■□□ 2.12
LCNL1-203ENST00000460177 ZBTB7BO15156 539 aaPredicted RBP28.3■■■□□ 2.12
LCNL1-203ENST00000460177 ITGB4P16144 1822 aa28.29■■■□□ 2.12
LCNL1-203ENST00000460177 C8orf37Q96NL8 207 aa28.29■■■□□ 2.12
LCNL1-203ENST00000460177 CHMP4BQ9H444 224 aaKnown RBP28.29■■■□□ 2.12
LCNL1-203ENST00000460177 CHPF2Q9P2E5 772 aa28.29■■■□□ 2.12
LCNL1-203ENST00000460177 PXDNLA1KZ92 1463 aa28.28■■■□□ 2.12
LCNL1-203ENST00000460177 PRAMEF22A3QJZ6 481 aa28.28■■■□□ 2.12
LCNL1-203ENST00000460177 THRAP3Q9Y2W1 955 aaKnown RBP28.28■■■□□ 2.12
LCNL1-203ENST00000460177 SPATA31A5Q5VU36 1347 aa28.28■■■□□ 2.12
LCNL1-203ENST00000460177 SPATA31A7Q8IWB4 1347 aa28.28■■■□□ 2.12
LCNL1-203ENST00000460177 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.27■■■□□ 2.12
LCNL1-203ENST00000460177 KCPQ6ZWJ8 1503 aa28.27■■■□□ 2.12
LCNL1-203ENST00000460177 TTC5Q8N0Z6 440 aa28.26■■■□□ 2.12
LCNL1-203ENST00000460177 ZNF496Q96IT1 587 aaPredicted RBP28.26■■■□□ 2.12
LCNL1-203ENST00000460177 FKBP5Q13451 457 aaPredicted RBP28.26■■■□□ 2.11
LCNL1-203ENST00000460177 F6X3S4 739 aa28.25■■■□□ 2.11
LCNL1-203ENST00000460177 CDCA7Q9BWT1 371 aaPredicted RBP28.25■■■□□ 2.11
LCNL1-203ENST00000460177 PHAXQ9H814 394 aaKnown RBP28.24■■■□□ 2.11
LCNL1-203ENST00000460177 NGLY1Q96IV0 654 aa28.23■■■□□ 2.11
LCNL1-203ENST00000460177 TSHZ2Q9NRE2 1034 aa28.23■■■□□ 2.11
LCNL1-203ENST00000460177 DOT1LQ8TEK3 1739 aa28.23■■■□□ 2.11
LCNL1-203ENST00000460177 BCL9LQ86UU0 1499 aa28.23■■■□□ 2.11
LCNL1-203ENST00000460177 FMNL2Q96PY5 1086 aa28.23■■■□□ 2.11
LCNL1-203ENST00000460177 RWDD1Q9H446 243 aaPredicted RBP28.23■■■□□ 2.11
LCNL1-203ENST00000460177 DBF4Q9UBU7 674 aaPredicted RBP28.23■■■□□ 2.11
LCNL1-203ENST00000460177 MEX3CQ5U5Q3 659 aaKnown RBP28.22■■■□□ 2.11
LCNL1-203ENST00000460177 UNC5CLQ8IV45 518 aa28.22■■■□□ 2.11
LCNL1-203ENST00000460177 EXOC5O00471 708 aa28.21■■■□□ 2.11
LCNL1-203ENST00000460177 CCT4P50991 539 aaKnown RBP28.21■■■□□ 2.11
LCNL1-203ENST00000460177 HDAC1Q13547 482 aaPredicted RBP28.21■■■□□ 2.11
LCNL1-203ENST00000460177 SKAP1Q86WV1 359 aa28.21■■■□□ 2.11
LCNL1-203ENST00000460177 ANXA1P04083 346 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms