RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.55
NUDCD3-203ENST00000460110 USP19O94966 1318 aa11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 ERBB3P21860 1342 aa11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 GNAI2P04899 355 aa11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 TRIM6-TRIM34B2RNG4 842 aa11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-203ENST00000460110 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-203ENST00000460110 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-203ENST00000460110 OTUD7AQ8TE49 926 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-203ENST00000460110 SRCIN1Q9C0H9 1055 aa11.63□□□□□ -0.55
NUDCD3-203ENST00000460110 SURF6O75683 361 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 IFNL2Q8IZJ0 200 aa11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 SIRT2Q8IXJ6 389 aa11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 RILPL2Q969X0 211 aa11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 BTG4Q9NY30 223 aa11.62□□□□□ -0.55
NUDCD3-203ENST00000460110 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-203ENST00000460110 PTPRCP08575 1304 aa11.61□□□□□ -0.55
NUDCD3-203ENST00000460110 CWF19L2Q2TBE0 894 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-203ENST00000460110 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
NUDCD3-203ENST00000460110 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
NUDCD3-203ENST00000460110 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
NUDCD3-203ENST00000460110 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 GNAI3P08754 354 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 ABCC4O15439 1325 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 SIL1Q9H173 461 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 KDRP35968 1356 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 ATP5J2-PTCD1G3V325 749 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 DEKP35659 375 aaKnown RBP11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 NUCB1Q02818 461 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 CEP85Q6P2H3 762 aa11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 ZNF496Q96IT1 587 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-203ENST00000460110 BECN1Q14457 450 aa11.59□□□□□ -0.55
NUDCD3-203ENST00000460110 ZCRB1Q8TBF4 217 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-203ENST00000460110 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-203ENST00000460110 CRB1P82279 1406 aa11.59□□□□□ -0.55
NUDCD3-203ENST00000460110 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-203ENST00000460110 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
NUDCD3-203ENST00000460110 NBPF7P0C2Y1 421 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 ZNF790Q6PG37 636 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 KNDC1Q76NI1 1749 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 ADGRB2O60241 1585 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 PNMA6EA0A0J9YXQ4 647 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 NUTM1Q86Y26 1132 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 CYP27B1O15528 508 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 DDX58O95786 925 aaKnown RBP11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 PHKG2P15735 406 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 ANKRD44Q8N8A2 993 aa11.58□□□□□ -0.56
NUDCD3-203ENST00000460110 XAGE3Q8WTP9 111 aa11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 ADAMTSL3P82987 1691 aa11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 LMTK3Q96Q04 1460 aa11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 MYD88Q99836 296 aa11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
NUDCD3-203ENST00000460110 RTL1A6NKG5 1358 aa11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 FAM177BA6PVY3 158 aa11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 MST1RQ04912 1400 aa11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 NOL8Q76FK4 1167 aaKnown RBP11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 SLC52A2Q9HAB3 445 aa11.56□□□□□ -0.56
NUDCD3-203ENST00000460110 IL2RBP14784 551 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 CASC1Q6TDU7 716 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 USP44Q9H0E7 712 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 ANKRD26Q9UPS8 1709 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
NUDCD3-203ENST00000460110 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 LRRCC1Q9C099 1032 aa11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 XRN1Q8IZH2 1706 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 DCAF5Q96JK2 942 aa11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 UBAP1LF5GYI3 381 aa11.54□□□□□ -0.56
NUDCD3-203ENST00000460110 A1BGP04217 495 aa11.53□□□□□ -0.56
NUDCD3-203ENST00000460110 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
NUDCD3-203ENST00000460110 NALCNQ8IZF0 1738 aa11.53□□□□□ -0.56
NUDCD3-203ENST00000460110 AKAP12Q02952 1782 aa11.53□□□□□ -0.56
NUDCD3-203ENST00000460110 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-203ENST00000460110 SNRPA1P09661 255 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms