RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 CABP4P57796 275 aa22.22■■□□□ 1.15
SHANK2-213ENST00000460048 COL23A1Q86Y22 540 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-213ENST00000460048 U2SURPO15042 1029 aaKnown RBP22.2■■□□□ 1.14
SHANK2-213ENST00000460048 ITPK1Q13572 414 aa22.2■■□□□ 1.14
SHANK2-213ENST00000460048 MTHFSDQ2M296 383 aaKnown RBP22.2■■□□□ 1.14
SHANK2-213ENST00000460048 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
SHANK2-213ENST00000460048 ATP6V1AP38606 617 aa22.19■■□□□ 1.14
SHANK2-213ENST00000460048 CFAP53Q96M91 514 aa22.19■■□□□ 1.14
SHANK2-213ENST00000460048 MRC1P22897 1456 aa22.19■■□□□ 1.14
SHANK2-213ENST00000460048 CICQ96RK0 1608 aaPredicted RBP22.18■■□□□ 1.14
SHANK2-213ENST00000460048 NFATC2IPQ8NCF5 419 aa22.18■■□□□ 1.14
SHANK2-213ENST00000460048 FLAD1Q8NFF5 587 aa22.18■■□□□ 1.14
SHANK2-213ENST00000460048 AK7Q96M32 723 aa22.18■■□□□ 1.14
SHANK2-213ENST00000460048 SLC4A9Q96Q91 983 aa22.18■■□□□ 1.14
SHANK2-213ENST00000460048 ARXQ96QS3 562 aa22.18■■□□□ 1.14
SHANK2-213ENST00000460048 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
SHANK2-213ENST00000460048 FHDC1Q9C0D6 1143 aaPredicted RBP22.17■■□□□ 1.14
SHANK2-213ENST00000460048 LGR6Q9HBX8 967 aa22.17■■□□□ 1.14
SHANK2-213ENST00000460048 MYH14Q7Z406 1995 aaKnown RBP22.16■■□□□ 1.14
SHANK2-213ENST00000460048 RNMTO43148 476 aaKnown RBP22.16■■□□□ 1.14
SHANK2-213ENST00000460048 TJP1Q07157 1748 aa22.16■■□□□ 1.14
SHANK2-213ENST00000460048 MAP3K5Q99683 1374 aa22.15■■□□□ 1.14
SHANK2-213ENST00000460048 SYT17Q9BSW7 474 aa22.15■■□□□ 1.14
SHANK2-213ENST00000460048 MSH5O43196 834 aa22.14■■□□□ 1.13
SHANK2-213ENST00000460048 POLD1P28340 1107 aa22.14■■□□□ 1.13
SHANK2-213ENST00000460048 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.13
SHANK2-213ENST00000460048 SLC52A2Q9HAB3 445 aa22.14■■□□□ 1.13
SHANK2-213ENST00000460048 SIPA1L3O60292 1781 aaPredicted RBP22.14■■□□□ 1.13
SHANK2-213ENST00000460048 SSFA2P28290 1259 aa22.13■■□□□ 1.13
SHANK2-213ENST00000460048 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
SHANK2-213ENST00000460048 NUDCQ9Y266 331 aa22.13■■□□□ 1.13
SHANK2-213ENST00000460048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
SHANK2-213ENST00000460048 SMIM5Q71RC9 77 aa22.12■■□□□ 1.13
SHANK2-213ENST00000460048 UBR2Q8IWV8 1755 aa22.12■■□□□ 1.13
SHANK2-213ENST00000460048 GAS2L2Q8NHY3 880 aa22.11■■□□□ 1.13
SHANK2-213ENST00000460048 GNPATO15228 680 aa22.1■■□□□ 1.13
SHANK2-213ENST00000460048 PHF14O94880 888 aa22.1■■□□□ 1.13
SHANK2-213ENST00000460048 RC3H1Q5TC82 1133 aaKnown RBP22.1■■□□□ 1.13
SHANK2-213ENST00000460048 CNTNAP4Q9C0A0 1308 aa22.09■■□□□ 1.13
SHANK2-213ENST00000460048 PTCD1O75127 700 aaKnown RBP22.09■■□□□ 1.13
SHANK2-213ENST00000460048 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
SHANK2-213ENST00000460048 MSL1Q68DK7 614 aa22.09■■□□□ 1.13
SHANK2-213ENST00000460048 PHACTR3Q96KR7 559 aa22.09■■□□□ 1.13
SHANK2-213ENST00000460048 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
SHANK2-213ENST00000460048 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
SHANK2-213ENST00000460048 U2AF1L5P0DN76 240 aaPredicted RBP22.08■■□□□ 1.13
SHANK2-213ENST00000460048 U2AF1Q01081 240 aaKnown RBP eCLIP22.08■■□□□ 1.13
SHANK2-213ENST00000460048 GNAT3A8MTJ3 354 aa22.07■■□□□ 1.12
SHANK2-213ENST00000460048 FCHSD2O94868 740 aa22.06■■□□□ 1.12
SHANK2-213ENST00000460048 DDX10Q13206 875 aaKnown RBP22.06■■□□□ 1.12
SHANK2-213ENST00000460048 IL17REQ8NFR9 667 aa22.06■■□□□ 1.12
SHANK2-213ENST00000460048 SLC39A6Q13433 755 aa22.05■■□□□ 1.12
SHANK2-213ENST00000460048 RTCBQ9Y3I0 505 aaKnown RBP22.05■■□□□ 1.12
SHANK2-213ENST00000460048 DLG5Q8TDM6 1919 aa22.05■■□□□ 1.12
SHANK2-213ENST00000460048 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
SHANK2-213ENST00000460048 RPS6KA4O75676 772 aa22.04■■□□□ 1.12
SHANK2-213ENST00000460048 CEMIPQ8WUJ3 1361 aa22.03■■□□□ 1.12
SHANK2-213ENST00000460048 ADRA2BP18089 450 aa22.02■■□□□ 1.12
SHANK2-213ENST00000460048 CRKLP46109 303 aaKnown RBP22.02■■□□□ 1.12
SHANK2-213ENST00000460048 RALBP1Q15311 655 aa22.02■■□□□ 1.12
SHANK2-213ENST00000460048 TRAPPC3LQ5T215 181 aa22.02■■□□□ 1.12
SHANK2-213ENST00000460048 KLHL34Q8N239 644 aa22.01■■□□□ 1.11
SHANK2-213ENST00000460048 ARHGEF1Q92888 912 aaKnown RBP22.01■■□□□ 1.11
SHANK2-213ENST00000460048 CHD4Q14839 1912 aa22.01■■□□□ 1.11
SHANK2-213ENST00000460048 TEFQ10587 303 aa22■■□□□ 1.11
SHANK2-213ENST00000460048 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
SHANK2-213ENST00000460048 INTS5Q6P9B9 1019 aaKnown RBP21.99■■□□□ 1.11
SHANK2-213ENST00000460048 VSIG10Q8N0Z9 540 aa21.99■■□□□ 1.11
SHANK2-213ENST00000460048 NLGN2Q8NFZ4 835 aa21.99■■□□□ 1.11
SHANK2-213ENST00000460048 KIF13BQ9NQT8 1826 aa21.98■■□□□ 1.11
SHANK2-213ENST00000460048 CYP19A1P11511 503 aaPredicted RBP21.97■■□□□ 1.11
SHANK2-213ENST00000460048 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
SHANK2-213ENST00000460048 ZNF790Q6PG37 636 aa21.96■■□□□ 1.11
SHANK2-213ENST00000460048 PLEKHF1Q96S99 279 aa21.96■■□□□ 1.11
SHANK2-213ENST00000460048 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
SHANK2-213ENST00000460048 CD2APQ9Y5K6 639 aa21.96■■□□□ 1.11
SHANK2-213ENST00000460048 GYS1P13807 737 aa21.95■■□□□ 1.1
SHANK2-213ENST00000460048 RFC4P35249 363 aa21.95■■□□□ 1.1
SHANK2-213ENST00000460048 TTC5Q8N0Z6 440 aa21.95■■□□□ 1.1
SHANK2-213ENST00000460048 HTATSF1O43719 755 aaKnown RBP21.94■■□□□ 1.1
SHANK2-213ENST00000460048 NLGN1Q8N2Q7 840 aa21.94■■□□□ 1.1
SHANK2-213ENST00000460048 ZNF496Q96IT1 587 aaPredicted RBP21.94■■□□□ 1.1
SHANK2-213ENST00000460048 RTF1Q92541 710 aaKnown RBP21.93■■□□□ 1.1
SHANK2-213ENST00000460048 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
SHANK2-213ENST00000460048 HEG1Q9ULI3 1381 aa21.93■■□□□ 1.1
SHANK2-213ENST00000460048 KIAA1551Q9HCM1 1747 aa21.92■■□□□ 1.1
SHANK2-213ENST00000460048 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
SHANK2-213ENST00000460048 MMP10P09238 476 aa21.92■■□□□ 1.1
SHANK2-213ENST00000460048 MCM10Q7L590 875 aa21.92■■□□□ 1.1
SHANK2-213ENST00000460048 USP42Q9H9J4 1324 aaKnown RBP21.91■■□□□ 1.1
SHANK2-213ENST00000460048 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
SHANK2-213ENST00000460048 YY1P25490 414 aa21.91■■□□□ 1.1
SHANK2-213ENST00000460048 DCTN1Q14203 1278 aa21.91■■□□□ 1.1
SHANK2-213ENST00000460048 ZBTB1Q9Y2K1 713 aa21.91■■□□□ 1.1
SHANK2-213ENST00000460048 UTRNP46939 3433 aa21.9■■□□□ 1.1
SHANK2-213ENST00000460048 KCNQ3O43525 872 aa21.9■■□□□ 1.1
SHANK2-213ENST00000460048 GPR162Q16538 588 aa21.9■■□□□ 1.1
SHANK2-213ENST00000460048 SRP68Q9UHB9 627 aaKnown RBP21.9■■□□□ 1.1
SHANK2-213ENST00000460048 NEFMP07197 916 aa21.89■■□□□ 1.09
SHANK2-213ENST00000460048 FMNL2Q96PY5 1086 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms