RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 AK7Q96M32 723 aa13.57□□□□□ -0.24
SYN3-205ENST00000459990 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
SYN3-205ENST00000459990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYN3-205ENST00000459990 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
SYN3-205ENST00000459990 CEP350Q5VT06 3117 aa13.56□□□□□ -0.24
SYN3-205ENST00000459990 ATG3Q9NT62 314 aa13.56□□□□□ -0.24
SYN3-205ENST00000459990 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
SYN3-205ENST00000459990 ADCY9O60503 1353 aa13.56□□□□□ -0.24
SYN3-205ENST00000459990 C1QTNF8P60827 252 aa13.55□□□□□ -0.24
SYN3-205ENST00000459990 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
SYN3-205ENST00000459990 PANK3Q9H999 370 aa13.55□□□□□ -0.24
SYN3-205ENST00000459990 SSFA2P28290 1259 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 CD2APQ9Y5K6 639 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
SYN3-205ENST00000459990 GNPATO15228 680 aa13.53□□□□□ -0.24
SYN3-205ENST00000459990 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYN3-205ENST00000459990 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.25
SYN3-205ENST00000459990 ATP6V1AP38606 617 aa13.52□□□□□ -0.25
SYN3-205ENST00000459990 MRC1P22897 1456 aa13.51□□□□□ -0.25
SYN3-205ENST00000459990 C10orf71Q711Q0 1435 aa13.51□□□□□ -0.25
SYN3-205ENST00000459990 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
SYN3-205ENST00000459990 GIGYF1O75420 1035 aaPredicted RBP13.5□□□□□ -0.25
SYN3-205ENST00000459990 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
SYN3-205ENST00000459990 ARFGEF1Q9Y6D6 1849 aa13.49□□□□□ -0.25
SYN3-205ENST00000459990 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
SYN3-205ENST00000459990 DCAF5Q96JK2 942 aa13.49□□□□□ -0.25
SYN3-205ENST00000459990 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
SYN3-205ENST00000459990 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
SYN3-205ENST00000459990 MMP10P09238 476 aa13.48□□□□□ -0.25
SYN3-205ENST00000459990 KCPQ6ZWJ8 1503 aa13.48□□□□□ -0.25
SYN3-205ENST00000459990 IL13P35225 146 aa13.47□□□□□ -0.25
SYN3-205ENST00000459990 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
SYN3-205ENST00000459990 MORC1Q86VD1 984 aa13.47□□□□□ -0.25
SYN3-205ENST00000459990 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
SYN3-205ENST00000459990 COL3A1P02461 1466 aaPredicted RBP13.47□□□□□ -0.25
SYN3-205ENST00000459990 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
SYN3-205ENST00000459990 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
SYN3-205ENST00000459990 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.25
SYN3-205ENST00000459990 HMGB2P26583 209 aaKnown RBP13.46□□□□□ -0.25
SYN3-205ENST00000459990 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
SYN3-205ENST00000459990 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
SYN3-205ENST00000459990 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
SYN3-205ENST00000459990 GYS1P13807 737 aa13.45□□□□□ -0.26
SYN3-205ENST00000459990 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
SYN3-205ENST00000459990 RTCBQ9Y3I0 505 aaKnown RBP13.45□□□□□ -0.26
SYN3-205ENST00000459990 NRXN2Q9P2S2 1712 aa13.44□□□□□ -0.26
SYN3-205ENST00000459990 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
SYN3-205ENST00000459990 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
SYN3-205ENST00000459990 DLEC1Q9Y238 1755 aa13.44□□□□□ -0.26
SYN3-205ENST00000459990 PTCD1O75127 700 aaKnown RBP13.43□□□□□ -0.26
SYN3-205ENST00000459990 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
SYN3-205ENST00000459990 MTHFSP49914 203 aa13.43□□□□□ -0.26
SYN3-205ENST00000459990 CABP4P57796 275 aa13.43□□□□□ -0.26
SYN3-205ENST00000459990 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
SYN3-205ENST00000459990 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
SYN3-205ENST00000459990 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
SYN3-205ENST00000459990 ADRA2BP18089 450 aa13.42□□□□□ -0.26
SYN3-205ENST00000459990 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
SYN3-205ENST00000459990 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
SYN3-205ENST00000459990 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
SYN3-205ENST00000459990 SRP68Q9UHB9 627 aaKnown RBP13.42□□□□□ -0.26
SYN3-205ENST00000459990 SBF1O95248 1867 aa13.42□□□□□ -0.26
SYN3-205ENST00000459990 SCN7AQ01118 1682 aa13.41□□□□□ -0.26
SYN3-205ENST00000459990 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
SYN3-205ENST00000459990 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.26
SYN3-205ENST00000459990 A0A0G2JLW4 131 aa13.4□□□□□ -0.26
SYN3-205ENST00000459990 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
SYN3-205ENST00000459990 HMOX1P09601 288 aa13.4□□□□□ -0.26
SYN3-205ENST00000459990 DDR1Q08345 913 aa13.4□□□□□ -0.26
SYN3-205ENST00000459990 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
SYN3-205ENST00000459990 GPBP1L1Q9HC44 474 aaPredicted RBP13.4□□□□□ -0.26
SYN3-205ENST00000459990 DPEP1P16444 411 aa13.39□□□□□ -0.27
SYN3-205ENST00000459990 KCNA3P22001 575 aa13.39□□□□□ -0.27
SYN3-205ENST00000459990 FKBP8Q14318 412 aa13.39□□□□□ -0.27
SYN3-205ENST00000459990 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
SYN3-205ENST00000459990 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
SYN3-205ENST00000459990 NLGN1Q8N2Q7 840 aa13.39□□□□□ -0.27
SYN3-205ENST00000459990 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
SYN3-205ENST00000459990 KIF3CO14782 793 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 RFC4P35249 363 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 TGFB2P61812 414 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 SLC52A2Q9HAB3 445 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 BCS1LQ9Y276 419 aa13.38□□□□□ -0.27
SYN3-205ENST00000459990 COL11A2P13942 1736 aaPredicted RBP13.38□□□□□ -0.27
SYN3-205ENST00000459990 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
SYN3-205ENST00000459990 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
SYN3-205ENST00000459990 SOS1Q07889 1333 aaPredicted RBP13.37□□□□□ -0.27
SYN3-205ENST00000459990 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
SYN3-205ENST00000459990 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
SYN3-205ENST00000459990 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
SYN3-205ENST00000459990 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
SYN3-205ENST00000459990 PARP3Q9Y6F1 533 aa13.36□□□□□ -0.27
SYN3-205ENST00000459990 COL15A1P39059 1388 aa13.35□□□□□ -0.27
SYN3-205ENST00000459990 TNRC6CQ9HCJ0 1690 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms