RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CDCA8Q53HL2 280 aa20■□□□□ 0.79
UPF3AP2-201ENST00000457924 GPBP1L1Q9HC44 474 aaPredicted RBP20■□□□□ 0.79
UPF3AP2-201ENST00000457924 NSD3Q9BZ95 1437 aa20■□□□□ 0.79
UPF3AP2-201ENST00000457924 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
UPF3AP2-201ENST00000457924 PHF14O94880 888 aa19.99■□□□□ 0.79
UPF3AP2-201ENST00000457924 UBR3Q6ZT12 1888 aa19.99■□□□□ 0.79
UPF3AP2-201ENST00000457924 CHRDL2Q6WN34 429 aa19.98■□□□□ 0.79
UPF3AP2-201ENST00000457924 PIGBQ92521 554 aa19.97■□□□□ 0.79
UPF3AP2-201ENST00000457924 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.96■□□□□ 0.79
UPF3AP2-201ENST00000457924 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
UPF3AP2-201ENST00000457924 EMILIN1Q9Y6C2 1016 aa19.96■□□□□ 0.79
UPF3AP2-201ENST00000457924 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
UPF3AP2-201ENST00000457924 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
UPF3AP2-201ENST00000457924 IFFO2Q5TF58 517 aa19.95■□□□□ 0.78
UPF3AP2-201ENST00000457924 AMIGO3Q86WK7 504 aa19.95■□□□□ 0.78
UPF3AP2-201ENST00000457924 ADCY9O60503 1353 aa19.95■□□□□ 0.78
UPF3AP2-201ENST00000457924 PPM1GO15355 546 aaPredicted RBP19.94■□□□□ 0.78
UPF3AP2-201ENST00000457924 SSFA2P28290 1259 aa19.94■□□□□ 0.78
UPF3AP2-201ENST00000457924 ZNF526Q8TF50 670 aaPredicted RBP19.94■□□□□ 0.78
UPF3AP2-201ENST00000457924 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
UPF3AP2-201ENST00000457924 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
UPF3AP2-201ENST00000457924 SIK1P57059 783 aa19.93■□□□□ 0.78
UPF3AP2-201ENST00000457924 SMIM5Q71RC9 77 aa19.93■□□□□ 0.78
UPF3AP2-201ENST00000457924 WWC3Q9ULE0 1092 aa19.93■□□□□ 0.78
UPF3AP2-201ENST00000457924 NCAPD2Q15021 1401 aa19.93■□□□□ 0.78
UPF3AP2-201ENST00000457924 LINC00116Q8NCU8 138 aa19.92■□□□□ 0.78
UPF3AP2-201ENST00000457924 CARD14Q9BXL6 1004 aa19.92■□□□□ 0.78
UPF3AP2-201ENST00000457924 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
UPF3AP2-201ENST00000457924 PRR29P0C7W0 189 aa19.91■□□□□ 0.78
UPF3AP2-201ENST00000457924 ANKRD26Q9UPS8 1709 aa19.9■□□□□ 0.78
UPF3AP2-201ENST00000457924 GNPATO15228 680 aa19.9■□□□□ 0.78
UPF3AP2-201ENST00000457924 HSPA6P17066 643 aa19.9■□□□□ 0.78
UPF3AP2-201ENST00000457924 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
UPF3AP2-201ENST00000457924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.9■□□□□ 0.78
UPF3AP2-201ENST00000457924 WASHC2AQ641Q2 1341 aa19.9■□□□□ 0.78
UPF3AP2-201ENST00000457924 IFNL2Q8IZJ0 200 aa19.89■□□□□ 0.77
UPF3AP2-201ENST00000457924 EYA1Q99502 592 aa19.89■□□□□ 0.77
UPF3AP2-201ENST00000457924 ASAP1Q9ULH1 1129 aa19.89■□□□□ 0.77
UPF3AP2-201ENST00000457924 ITPK1Q13572 414 aa19.87■□□□□ 0.77
UPF3AP2-201ENST00000457924 CEP350Q5VT06 3117 aa19.86■□□□□ 0.77
UPF3AP2-201ENST00000457924 PHKG2P15735 406 aa19.86■□□□□ 0.77
UPF3AP2-201ENST00000457924 MMP10P09238 476 aa19.85■□□□□ 0.77
UPF3AP2-201ENST00000457924 ATG3Q9NT62 314 aa19.85■□□□□ 0.77
UPF3AP2-201ENST00000457924 KIF13BQ9NQT8 1826 aa19.83■□□□□ 0.77
UPF3AP2-201ENST00000457924 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
UPF3AP2-201ENST00000457924 CICQ96RK0 1608 aaPredicted RBP19.83■□□□□ 0.76
UPF3AP2-201ENST00000457924 KIF3CO14782 793 aa19.82■□□□□ 0.76
UPF3AP2-201ENST00000457924 FXR2P51116 673 aaKnown RBP eCLIP19.82■□□□□ 0.76
UPF3AP2-201ENST00000457924 TGFB2P61812 414 aa19.82■□□□□ 0.76
UPF3AP2-201ENST00000457924 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
UPF3AP2-201ENST00000457924 RTCBQ9Y3I0 505 aaKnown RBP19.82■□□□□ 0.76
UPF3AP2-201ENST00000457924 PXDNLA1KZ92 1463 aa19.81■□□□□ 0.76
UPF3AP2-201ENST00000457924 N4BP2Q86UW6 1770 aaPredicted RBP19.81■□□□□ 0.76
UPF3AP2-201ENST00000457924 NLGN1Q8N2Q7 840 aa19.81■□□□□ 0.76
UPF3AP2-201ENST00000457924 PLEKHG2Q9H7P9 1386 aa19.8■□□□□ 0.76
UPF3AP2-201ENST00000457924 ZNF831Q5JPB2 1677 aa19.79■□□□□ 0.76
UPF3AP2-201ENST00000457924 ERVV-2B6SEH9 535 aa19.79■□□□□ 0.76
UPF3AP2-201ENST00000457924 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
UPF3AP2-201ENST00000457924 BCS1LQ9Y276 419 aa19.79■□□□□ 0.76
UPF3AP2-201ENST00000457924 KDRP35968 1356 aa19.79■□□□□ 0.76
UPF3AP2-201ENST00000457924 KIAA1551Q9HCM1 1747 aa19.79■□□□□ 0.76
UPF3AP2-201ENST00000457924 A0A0G2JLW4 131 aa19.78■□□□□ 0.76
UPF3AP2-201ENST00000457924 HSP90AB1P08238 724 aaKnown RBP19.78■□□□□ 0.76
UPF3AP2-201ENST00000457924 VASPP50552 380 aaPredicted RBP19.78■□□□□ 0.76
UPF3AP2-201ENST00000457924 TNNT2P45379 298 aaPredicted RBP19.77■□□□□ 0.76
UPF3AP2-201ENST00000457924 RC3H1Q5TC82 1133 aaKnown RBP19.77■□□□□ 0.76
UPF3AP2-201ENST00000457924 ARHGEF1Q92888 912 aaKnown RBP19.77■□□□□ 0.76
UPF3AP2-201ENST00000457924 DCAF5Q96JK2 942 aa19.77■□□□□ 0.76
UPF3AP2-201ENST00000457924 CCDC87Q9NVE4 849 aa19.77■□□□□ 0.76
UPF3AP2-201ENST00000457924 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
UPF3AP2-201ENST00000457924 RFC4P35249 363 aa19.76■□□□□ 0.75
UPF3AP2-201ENST00000457924 ARHGAP27Q6ZUM4 889 aa19.76■□□□□ 0.75
UPF3AP2-201ENST00000457924 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
UPF3AP2-201ENST00000457924 CNTNAP4Q9C0A0 1308 aa19.76■□□□□ 0.75
UPF3AP2-201ENST00000457924 APLP1P51693 650 aa19.75■□□□□ 0.75
UPF3AP2-201ENST00000457924 PLEKHO1Q53GL0 409 aaPredicted RBP19.75■□□□□ 0.75
UPF3AP2-201ENST00000457924 SLC4A9Q96Q91 983 aa19.75■□□□□ 0.75
UPF3AP2-201ENST00000457924 POLR3GLQ9BT43 218 aa19.75■□□□□ 0.75
UPF3AP2-201ENST00000457924 PARP3Q9Y6F1 533 aa19.75■□□□□ 0.75
UPF3AP2-201ENST00000457924 C4AP0C0L4 1744 aa19.75■□□□□ 0.75
UPF3AP2-201ENST00000457924 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
UPF3AP2-201ENST00000457924 TOMM70O94826 608 aa19.74■□□□□ 0.75
UPF3AP2-201ENST00000457924 GYS1P13807 737 aa19.74■□□□□ 0.75
UPF3AP2-201ENST00000457924 PIP4P2Q8N4L2 257 aa19.74■□□□□ 0.75
UPF3AP2-201ENST00000457924 FCHSD2O94868 740 aa19.73■□□□□ 0.75
UPF3AP2-201ENST00000457924 DPEP1P16444 411 aa19.73■□□□□ 0.75
UPF3AP2-201ENST00000457924 CABP4P57796 275 aa19.73■□□□□ 0.75
UPF3AP2-201ENST00000457924 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
UPF3AP2-201ENST00000457924 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
UPF3AP2-201ENST00000457924 ZNF530Q6P9A1 599 aaPredicted RBP19.72■□□□□ 0.75
UPF3AP2-201ENST00000457924 CREBZFQ9NS37 354 aa19.72■□□□□ 0.75
UPF3AP2-201ENST00000457924 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
UPF3AP2-201ENST00000457924 MYH14Q7Z406 1995 aaKnown RBP19.71■□□□□ 0.75
UPF3AP2-201ENST00000457924 KDM6AO15550 1401 aaPredicted RBP19.7■□□□□ 0.74
UPF3AP2-201ENST00000457924 ARFGEF1Q9Y6D6 1849 aa19.69■□□□□ 0.74
UPF3AP2-201ENST00000457924 MTHFSP49914 203 aa19.69■□□□□ 0.74
UPF3AP2-201ENST00000457924 C1orf141Q5JVX7 400 aa19.69■□□□□ 0.74
UPF3AP2-201ENST00000457924 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
UPF3AP2-201ENST00000457924 PTCD1O75127 700 aaKnown RBP19.68■□□□□ 0.74
UPF3AP2-201ENST00000457924 PIM2Q9P1W9 311 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms