RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 KCNQ3O43525 872 aa14.39□□□□□ -0.11
TCF4-204ENST00000457482 PLEKHO1Q53GL0 409 aaPredicted RBP14.39□□□□□ -0.11
TCF4-204ENST00000457482 SMC5Q8IY18 1101 aa14.39□□□□□ -0.11
TCF4-204ENST00000457482 F6X3S4 739 aa14.38□□□□□ -0.11
TCF4-204ENST00000457482 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
TCF4-204ENST00000457482 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
TCF4-204ENST00000457482 AKAP4Q5JQC9 854 aa14.38□□□□□ -0.11
TCF4-204ENST00000457482 IPO9Q96P70 1041 aaKnown RBP14.38□□□□□ -0.11
TCF4-204ENST00000457482 NLRP2Q9NX02 1062 aa14.38□□□□□ -0.11
TCF4-204ENST00000457482 PTPRCP08575 1304 aa14.37□□□□□ -0.11
TCF4-204ENST00000457482 AMOTQ4VCS5 1084 aa14.36□□□□□ -0.11
TCF4-204ENST00000457482 KDM3BQ7LBC6 1761 aa14.36□□□□□ -0.11
TCF4-204ENST00000457482 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
TCF4-204ENST00000457482 SEC24BO95487 1268 aa14.36□□□□□ -0.11
TCF4-204ENST00000457482 C1orf141Q5JVX7 400 aa14.35□□□□□ -0.11
TCF4-204ENST00000457482 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
TCF4-204ENST00000457482 EIF4A1P60842 406 aaKnown RBP14.34□□□□□ -0.11
TCF4-204ENST00000457482 CCDC30Q5VVM6 783 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 MEIS3Q99687 375 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 STK31Q9BXU1 1019 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 BABAM1Q9NWV8 329 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 TEFQ10587 303 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 FLIIQ13045 1269 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 LNPKQ9C0E8 428 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 MEGF6O75095 1541 aa14.34□□□□□ -0.11
TCF4-204ENST00000457482 CACNA1FO60840 1977 aa14.33□□□□□ -0.11
TCF4-204ENST00000457482 NUCB1Q02818 461 aa14.33□□□□□ -0.11
TCF4-204ENST00000457482 CHMP4BQ9H444 224 aaKnown RBP14.33□□□□□ -0.11
TCF4-204ENST00000457482 BTBD11A6QL63 1104 aa14.33□□□□□ -0.12
TCF4-204ENST00000457482 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
TCF4-204ENST00000457482 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
TCF4-204ENST00000457482 SOS2Q07890 1332 aaPredicted RBP14.32□□□□□ -0.12
TCF4-204ENST00000457482 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
TCF4-204ENST00000457482 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
TCF4-204ENST00000457482 FKBP5Q13451 457 aaPredicted RBP14.32□□□□□ -0.12
TCF4-204ENST00000457482 RAPGEF4Q8WZA2 1011 aa14.32□□□□□ -0.12
TCF4-204ENST00000457482 PHAXQ9H814 394 aaKnown RBP14.32□□□□□ -0.12
TCF4-204ENST00000457482 ANKRD45Q5TZF3 282 aa14.31□□□□□ -0.12
TCF4-204ENST00000457482 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
TCF4-204ENST00000457482 SIPA1L3O60292 1781 aaPredicted RBP14.31□□□□□ -0.12
TCF4-204ENST00000457482 CPDO75976 1380 aa14.31□□□□□ -0.12
TCF4-204ENST00000457482 PRAMEF22A3QJZ6 481 aa14.3□□□□□ -0.12
TCF4-204ENST00000457482 ANXA1P04083 346 aa14.3□□□□□ -0.12
TCF4-204ENST00000457482 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
TCF4-204ENST00000457482 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 CHPF2Q9P2E5 772 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 ADAMTS7Q9UKP4 1686 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 KDM6AO15550 1401 aaPredicted RBP14.29□□□□□ -0.12
TCF4-204ENST00000457482 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
TCF4-204ENST00000457482 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
TCF4-204ENST00000457482 SOS1Q07889 1333 aaPredicted RBP14.28□□□□□ -0.12
TCF4-204ENST00000457482 SCN11AQ9UI33 1791 aa14.28□□□□□ -0.12
TCF4-204ENST00000457482 ANKRD44Q8N8A2 993 aa14.28□□□□□ -0.12
TCF4-204ENST00000457482 ABCA3Q99758 1704 aa14.28□□□□□ -0.12
TCF4-204ENST00000457482 OVOS2A0A0G2JMS6 1433 aa14.28□□□□□ -0.12
TCF4-204ENST00000457482 PHKG2P15735 406 aa14.27□□□□□ -0.12
TCF4-204ENST00000457482 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.12
TCF4-204ENST00000457482 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.12
TCF4-204ENST00000457482 SLC39A6Q13433 755 aa14.27□□□□□ -0.13
TCF4-204ENST00000457482 ABCC6O95255 1503 aa14.26□□□□□ -0.13
TCF4-204ENST00000457482 CYP27B1O15528 508 aa14.26□□□□□ -0.13
TCF4-204ENST00000457482 DCTPP1Q9H773 170 aa14.26□□□□□ -0.13
TCF4-204ENST00000457482 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 GIGYF1O75420 1035 aaPredicted RBP14.25□□□□□ -0.13
TCF4-204ENST00000457482 PROSER3Q2NL68 480 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 NFATC2IPQ8NCF5 419 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 N4BP2Q86UW6 1770 aaPredicted RBP14.25□□□□□ -0.13
TCF4-204ENST00000457482 HOXB7P09629 217 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 SLC4A3P48751 1232 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 RPAP2Q8IXW5 612 aaPredicted RBP14.25□□□□□ -0.13
TCF4-204ENST00000457482 HEG1Q9ULI3 1381 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
TCF4-204ENST00000457482 APBB1O00213 710 aa14.24□□□□□ -0.13
TCF4-204ENST00000457482 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
TCF4-204ENST00000457482 C16orf71Q8IYS4 520 aaPredicted RBP14.24□□□□□ -0.13
TCF4-204ENST00000457482 COL5A2P05997 1499 aaPredicted RBP14.23□□□□□ -0.13
TCF4-204ENST00000457482 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
TCF4-204ENST00000457482 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
TCF4-204ENST00000457482 IFNL2Q8IZJ0 200 aa14.23□□□□□ -0.13
TCF4-204ENST00000457482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.13
TCF4-204ENST00000457482 SMARCA5O60264 1052 aaPredicted RBP14.23□□□□□ -0.13
TCF4-204ENST00000457482 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
TCF4-204ENST00000457482 C5P01031 1676 aa14.22□□□□□ -0.13
TCF4-204ENST00000457482 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
TCF4-204ENST00000457482 ZNF790Q6PG37 636 aa14.22□□□□□ -0.13
TCF4-204ENST00000457482 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
TCF4-204ENST00000457482 STRN4Q9NRL3 753 aa14.22□□□□□ -0.13
TCF4-204ENST00000457482 GNAI2P04899 355 aa14.22□□□□□ -0.13
TCF4-204ENST00000457482 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
TCF4-204ENST00000457482 OTUD7AQ8TE49 926 aaPredicted RBP14.22□□□□□ -0.13
TCF4-204ENST00000457482 ADCY9O60503 1353 aa14.21□□□□□ -0.13
TCF4-204ENST00000457482 LRRFIP2Q9Y608 721 aaKnown RBP14.21□□□□□ -0.13
TCF4-204ENST00000457482 PXDNLA1KZ92 1463 aa14.21□□□□□ -0.13
TCF4-204ENST00000457482 PNMA6EA0A0J9YXQ4 647 aa14.2□□□□□ -0.14
TCF4-204ENST00000457482 LARP1Q6PKG0 1096 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms