RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 BABAM1Q9NWV8 329 aa16.91■□□□□ 0.3
SYT1-204ENST00000457153 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
SYT1-204ENST00000457153 SSFA2P28290 1259 aa16.91■□□□□ 0.3
SYT1-204ENST00000457153 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
SYT1-204ENST00000457153 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
SYT1-204ENST00000457153 DEPDC5O75140 1603 aa16.9■□□□□ 0.3
SYT1-204ENST00000457153 VWDEQ8N2E2 1590 aa16.9■□□□□ 0.3
SYT1-204ENST00000457153 PDE1AP54750 535 aa16.9■□□□□ 0.3
SYT1-204ENST00000457153 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
SYT1-204ENST00000457153 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
SYT1-204ENST00000457153 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
SYT1-204ENST00000457153 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
SYT1-204ENST00000457153 TPM4P67936 248 aa16.89■□□□□ 0.3
SYT1-204ENST00000457153 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
SYT1-204ENST00000457153 ANAPC15P60006 121 aa16.89■□□□□ 0.29
SYT1-204ENST00000457153 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
SYT1-204ENST00000457153 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
SYT1-204ENST00000457153 ESPNB1AK53 854 aa16.89■□□□□ 0.29
SYT1-204ENST00000457153 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
SYT1-204ENST00000457153 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
SYT1-204ENST00000457153 NCKAP5LQ9HCH0 1330 aa16.88■□□□□ 0.29
SYT1-204ENST00000457153 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
SYT1-204ENST00000457153 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
SYT1-204ENST00000457153 AACSQ86V21 672 aa16.86■□□□□ 0.29
SYT1-204ENST00000457153 EYA1Q99502 592 aa16.86■□□□□ 0.29
SYT1-204ENST00000457153 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
SYT1-204ENST00000457153 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
SYT1-204ENST00000457153 HYPKQ9NX55 129 aa16.86■□□□□ 0.29
SYT1-204ENST00000457153 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
SYT1-204ENST00000457153 SF3A1Q15459 793 aaKnown RBP16.86■□□□□ 0.29
SYT1-204ENST00000457153 CAMSAP1Q5T5Y3 1602 aa16.85■□□□□ 0.29
SYT1-204ENST00000457153 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
SYT1-204ENST00000457153 CWC27Q6UX04 472 aaKnown RBP16.85■□□□□ 0.29
SYT1-204ENST00000457153 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
SYT1-204ENST00000457153 USHBP1Q8N6Y0 703 aa16.85■□□□□ 0.29
SYT1-204ENST00000457153 GOLGA6L19H0YKK7 550 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 TPM3P06753 285 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 EVA1CP58658 441 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 KRT24Q2M2I5 525 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 TULP4Q9NRJ4 1543 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 MSH6P52701 1360 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
SYT1-204ENST00000457153 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
SYT1-204ENST00000457153 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 C16orf71Q8IYS4 520 aaPredicted RBP16.84■□□□□ 0.29
SYT1-204ENST00000457153 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 ESYT1Q9BSJ8 1104 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
SYT1-204ENST00000457153 ZNF853P0CG23 659 aa16.83■□□□□ 0.29
SYT1-204ENST00000457153 BICD2Q8TD16 824 aa16.83■□□□□ 0.29
SYT1-204ENST00000457153 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
SYT1-204ENST00000457153 KRT32Q14532 448 aa16.83■□□□□ 0.28
SYT1-204ENST00000457153 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 SH2B1Q9NRF2 756 aaPredicted RBP16.82■□□□□ 0.28
SYT1-204ENST00000457153 NEUROD6Q96NK8 337 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
SYT1-204ENST00000457153 METP08581 1390 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 TPM2P07951 284 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
SYT1-204ENST00000457153 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
SYT1-204ENST00000457153 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
SYT1-204ENST00000457153 XRCC6P12956 609 aaKnown RBP eCLIP16.81■□□□□ 0.28
SYT1-204ENST00000457153 ECHDC1Q9NTX5 307 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 FOXO3O43524 673 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 HOXC9P31274 260 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
SYT1-204ENST00000457153 BECN2A8MW95 431 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 FIBPO43427 364 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 ZSCAN30Q86W11 494 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
SYT1-204ENST00000457153 CABP4P57796 275 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 KRT85P78386 507 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 HOXB7P09629 217 aa16.8■□□□□ 0.28
SYT1-204ENST00000457153 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 TMX3Q96JJ7 454 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 CASTP20810 708 aaKnown RBP16.79■□□□□ 0.28
SYT1-204ENST00000457153 TRDNQ13061 729 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 A2ML1A8K2U0 1454 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 SIL1Q9H173 461 aa16.79■□□□□ 0.28
SYT1-204ENST00000457153 CPLX1O14810 134 aa16.78■□□□□ 0.28
SYT1-204ENST00000457153 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
SYT1-204ENST00000457153 MYL6BP14649 208 aa16.78■□□□□ 0.28
SYT1-204ENST00000457153 LARP1BQ659C4 914 aaKnown RBP16.78■□□□□ 0.28
SYT1-204ENST00000457153 PLEKHG1Q9ULL1 1385 aa16.78■□□□□ 0.28
SYT1-204ENST00000457153 DIP2CQ9Y2E4 1556 aa16.78■□□□□ 0.28
SYT1-204ENST00000457153 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms