RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, humanhuman

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-205ENST00000457023 YBX3P16989 372 aaKnown RBP eCLIP34.49■■■■□ 3.11
CAPN7-205ENST00000457023 DCAF5Q96JK2 942 aa34.49■■■■□ 3.11
CAPN7-205ENST00000457023 KNSTRNQ9Y448 316 aa34.49■■■■□ 3.11
CAPN7-205ENST00000457023 GRIN3BO60391 1043 aa34.48■■■■□ 3.11
CAPN7-205ENST00000457023 AMOTQ4VCS5 1084 aa34.48■■■■□ 3.11
CAPN7-205ENST00000457023 UBR3Q6ZT12 1888 aa34.46■■■■□ 3.11
CAPN7-205ENST00000457023 GNPATO15228 680 aa34.42■■■■□ 3.1
CAPN7-205ENST00000457023 AMER1Q5JTC6 1135 aaPredicted RBP34.42■■■■□ 3.1
CAPN7-205ENST00000457023 ZNF530Q6P9A1 599 aaPredicted RBP34.42■■■■□ 3.1
CAPN7-205ENST00000457023 AEBP1Q8IUX7 1158 aa34.42■■■■□ 3.1
CAPN7-205ENST00000457023 SLC4A9Q96Q91 983 aa34.42■■■■□ 3.1
CAPN7-205ENST00000457023 GOLGB1Q14789 3259 aaKnown RBP34.42■■■■□ 3.1
CAPN7-205ENST00000457023 KDRP35968 1356 aa34.41■■■■□ 3.1
CAPN7-205ENST00000457023 IL13P35225 146 aa34.41■■■■□ 3.1
CAPN7-205ENST00000457023 KDM6AO15550 1401 aaPredicted RBP34.39■■■■□ 3.1
CAPN7-205ENST00000457023 KIF7Q2M1P5 1343 aa34.38■■■■□ 3.09
CAPN7-205ENST00000457023 CABP4P57796 275 aa34.38■■■■□ 3.09
CAPN7-205ENST00000457023 SULT6B1Q6IMI4 303 aa34.38■■■■□ 3.09
CAPN7-205ENST00000457023 MTHFSP49914 203 aa34.37■■■■□ 3.09
CAPN7-205ENST00000457023 RC3H1Q5TC82 1133 aaKnown RBP34.37■■■■□ 3.09
CAPN7-205ENST00000457023 RBM42Q9BTD8 480 aaKnown RBP34.37■■■■□ 3.09
CAPN7-205ENST00000457023 ZNF831Q5JPB2 1677 aa34.35■■■■□ 3.09
CAPN7-205ENST00000457023 C1orf141Q5JVX7 400 aa34.34■■■■□ 3.09
CAPN7-205ENST00000457023 TRAPPC3LQ5T215 181 aa34.34■■■■□ 3.09
CAPN7-205ENST00000457023 RTCBQ9Y3I0 505 aaKnown RBP34.34■■■■□ 3.09
CAPN7-205ENST00000457023 PER1O15534 1290 aaPredicted RBP34.33■■■■□ 3.09
CAPN7-205ENST00000457023 C1QTNF8P60827 252 aa34.32■■■■□ 3.08
CAPN7-205ENST00000457023 NFATC2IPQ8NCF5 419 aa34.31■■■■□ 3.08
CAPN7-205ENST00000457023 CNTNAP4Q9C0A0 1308 aa34.3■■■■□ 3.08
CAPN7-205ENST00000457023 ADRA2BP18089 450 aa34.29■■■■□ 3.08
CAPN7-205ENST00000457023 ARHGEF1Q92888 912 aaKnown RBP34.29■■■■□ 3.08
CAPN7-205ENST00000457023 RPS6KA4O75676 772 aa34.28■■■■□ 3.08
CAPN7-205ENST00000457023 MMP10P09238 476 aa34.27■■■■□ 3.08
CAPN7-205ENST00000457023 NLGN1Q8N2Q7 840 aa34.27■■■■□ 3.08
CAPN7-205ENST00000457023 AKAP4Q5JQC9 854 aa34.25■■■■□ 3.07
CAPN7-205ENST00000457023 PTCD1O75127 700 aaKnown RBP34.24■■■■□ 3.07
CAPN7-205ENST00000457023 COL5A3P25940 1745 aaPredicted RBP34.22■■■■□ 3.07
CAPN7-205ENST00000457023 GIGYF1O75420 1035 aaPredicted RBP34.22■■■■□ 3.07
CAPN7-205ENST00000457023 GYS1P13807 737 aa34.21■■■■□ 3.07
CAPN7-205ENST00000457023 RFC4P35249 363 aa34.2■■■■□ 3.07
CAPN7-205ENST00000457023 TGFB2P61812 414 aa34.18■■■■□ 3.06
CAPN7-205ENST00000457023 LGR6Q9HBX8 967 aa34.18■■■■□ 3.06
CAPN7-205ENST00000457023 CRKLP46109 303 aaKnown RBP34.17■■■■□ 3.06
CAPN7-205ENST00000457023 CC2D1BQ5T0F9 858 aaKnown RBP34.17■■■■□ 3.06
CAPN7-205ENST00000457023 SLC52A2Q9HAB3 445 aa34.17■■■■□ 3.06
CAPN7-205ENST00000457023 DIAPH1O60610 1272 aaKnown RBP34.16■■■■□ 3.06
CAPN7-205ENST00000457023 HMOX1P09601 288 aa34.16■■■■□ 3.06
CAPN7-205ENST00000457023 WWC3Q9ULE0 1092 aa34.16■■■■□ 3.06
CAPN7-205ENST00000457023 ATP10DQ9P241 1426 aa34.14■■■■□ 3.06
CAPN7-205ENST00000457023 ADCY9O60503 1353 aa34.13■■■■□ 3.05
CAPN7-205ENST00000457023 SENP3-EIF4A1A0A087X0R7 540 aa34.13■■■■□ 3.05
CAPN7-205ENST00000457023 RNMTO43148 476 aaKnown RBP34.13■■■■□ 3.05
CAPN7-205ENST00000457023 SCN11AQ9UI33 1791 aa34.13■■■■□ 3.05
CAPN7-205ENST00000457023 NPC1L1Q9UHC9 1359 aa34.12■■■■□ 3.05
CAPN7-205ENST00000457023 MTHFSDQ2M296 383 aaKnown RBP34.12■■■■□ 3.05
CAPN7-205ENST00000457023 INTS5Q6P9B9 1019 aaKnown RBP34.12■■■■□ 3.05
CAPN7-205ENST00000457023 MYH14Q7Z406 1995 aaKnown RBP34.12■■■■□ 3.05
CAPN7-205ENST00000457023 PXDNLA1KZ92 1463 aa34.12■■■■□ 3.05
CAPN7-205ENST00000457023 CICQ96RK0 1608 aaPredicted RBP34.12■■■■□ 3.05
CAPN7-205ENST00000457023 CCDC87Q9NVE4 849 aa34.11■■■■□ 3.05
CAPN7-205ENST00000457023 PARP3Q9Y6F1 533 aa34.11■■■■□ 3.05
CAPN7-205ENST00000457023 KIF13BQ9NQT8 1826 aa34.1■■■■□ 3.05
CAPN7-205ENST00000457023 C10orf71Q711Q0 1435 aa34.1■■■■□ 3.05
CAPN7-205ENST00000457023 A0A0G2JLW4 131 aa34.09■■■■□ 3.05
CAPN7-205ENST00000457023 TJP1Q07157 1748 aa34.07■■■■□ 3.05
CAPN7-205ENST00000457023 USP42Q9H9J4 1324 aaKnown RBP34.07■■■■□ 3.05
CAPN7-205ENST00000457023 DNAJC10Q8IXB1 793 aa34.07■■■■□ 3.04
CAPN7-205ENST00000457023 SRP68Q9UHB9 627 aaKnown RBP34.07■■■■□ 3.04
CAPN7-205ENST00000457023 MRC1P22897 1456 aa34.07■■■■□ 3.04
CAPN7-205ENST00000457023 GPBP1L1Q9HC44 474 aaPredicted RBP34.06■■■■□ 3.04
CAPN7-205ENST00000457023 C4AP0C0L4 1744 aa34.06■■■■□ 3.04
CAPN7-205ENST00000457023 KIAA1551Q9HCM1 1747 aa34.06■■■■□ 3.04
CAPN7-205ENST00000457023 SLC39A6Q13433 755 aa34.05■■■■□ 3.04
CAPN7-205ENST00000457023 FKBP8Q14318 412 aa34.05■■■■□ 3.04
CAPN7-205ENST00000457023 DPEP1P16444 411 aa34.04■■■■□ 3.04
CAPN7-205ENST00000457023 CYP19A1P11511 503 aaPredicted RBP34.03■■■■□ 3.04
CAPN7-205ENST00000457023 KCNA3P22001 575 aa34.02■■■■□ 3.04
CAPN7-205ENST00000457023 BCS1LQ9Y276 419 aa34.02■■■■□ 3.04
CAPN7-205ENST00000457023 ADAMTS7Q9UKP4 1686 aa34.02■■■■□ 3.04
CAPN7-205ENST00000457023 TM4SF1P30408 202 aa34.01■■■■□ 3.03
CAPN7-205ENST00000457023 COL3A1P02461 1466 aaPredicted RBP34.01■■■■□ 3.03
CAPN7-205ENST00000457023 VSIG10Q8N0Z9 540 aa34■■■■□ 3.03
CAPN7-205ENST00000457023 N4BP2Q86UW6 1770 aaPredicted RBP33.99■■■■□ 3.03
CAPN7-205ENST00000457023 DDR1Q08345 913 aa33.99■■■■□ 3.03
CAPN7-205ENST00000457023 SOS1Q07889 1333 aaPredicted RBP33.99■■■■□ 3.03
CAPN7-205ENST00000457023 KCPQ6ZWJ8 1503 aa33.98■■■■□ 3.03
CAPN7-205ENST00000457023 ZNF526Q8TF50 670 aaPredicted RBP33.97■■■■□ 3.03
CAPN7-205ENST00000457023 ZPR1O75312 459 aa33.96■■■■□ 3.03
CAPN7-205ENST00000457023 POLRMTO00411 1230 aaKnown RBP33.95■■■■□ 3.03
CAPN7-205ENST00000457023 U2SURPO15042 1029 aaKnown RBP33.95■■■■□ 3.03
CAPN7-205ENST00000457023 CNGB1Q14028 1251 aaPredicted RBP33.95■■■■□ 3.03
CAPN7-205ENST00000457023 USPL1Q5W0Q7 1092 aa33.95■■■■□ 3.03
CAPN7-205ENST00000457023 FCHSD2O94868 740 aa33.94■■■■□ 3.02
CAPN7-205ENST00000457023 IL17REQ8NFR9 667 aa33.94■■■■□ 3.02
CAPN7-205ENST00000457023 ARHGAP27Q6ZUM4 889 aa33.93■■■■□ 3.02
CAPN7-205ENST00000457023 PIM2Q9P1W9 311 aa33.93■■■■□ 3.02
CAPN7-205ENST00000457023 NARFQ9UHQ1 456 aa33.93■■■■□ 3.02
CAPN7-205ENST00000457023 ZBTB1Q9Y2K1 713 aa33.92■■■■□ 3.02
CAPN7-205ENST00000457023 GNAT3A8MTJ3 354 aa33.91■■■■□ 3.02
CAPN7-205ENST00000457023 GAS2L2Q8NHY3 880 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms