RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
SNHG17-208ENST00000456953 N4BP2Q86UW6 1770 aaPredicted RBP18.44■□□□□ 0.54
SNHG17-208ENST00000456953 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
SNHG17-208ENST00000456953 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
SNHG17-208ENST00000456953 NLGN1Q8N2Q7 840 aa18.43■□□□□ 0.54
SNHG17-208ENST00000456953 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
SNHG17-208ENST00000456953 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
SNHG17-208ENST00000456953 JMYQ8N9B5 988 aa18.42■□□□□ 0.54
SNHG17-208ENST00000456953 KLRG1Q96E93 195 aa18.42■□□□□ 0.54
SNHG17-208ENST00000456953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNHG17-208ENST00000456953 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
SNHG17-208ENST00000456953 TONSLQ96HA7 1378 aa18.42■□□□□ 0.54
SNHG17-208ENST00000456953 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
SNHG17-208ENST00000456953 TMF1P82094 1093 aa18.41■□□□□ 0.54
SNHG17-208ENST00000456953 FSTL1Q12841 308 aa18.41■□□□□ 0.54
SNHG17-208ENST00000456953 TRAPPC3LQ5T215 181 aa18.41■□□□□ 0.54
SNHG17-208ENST00000456953 FCHSD2O94868 740 aa18.4■□□□□ 0.54
SNHG17-208ENST00000456953 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
SNHG17-208ENST00000456953 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
SNHG17-208ENST00000456953 DPEP1P16444 411 aa18.39■□□□□ 0.53
SNHG17-208ENST00000456953 ADRA2BP18089 450 aa18.39■□□□□ 0.53
SNHG17-208ENST00000456953 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
SNHG17-208ENST00000456953 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.53
SNHG17-208ENST00000456953 C4AP0C0L4 1744 aa18.38■□□□□ 0.53
SNHG17-208ENST00000456953 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
SNHG17-208ENST00000456953 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
SNHG17-208ENST00000456953 EMILIN1Q9Y6C2 1016 aa18.38■□□□□ 0.53
SNHG17-208ENST00000456953 KDRP35968 1356 aa18.38■□□□□ 0.53
SNHG17-208ENST00000456953 PHKG2P15735 406 aa18.37■□□□□ 0.53
SNHG17-208ENST00000456953 HTRA3P83110 453 aa18.37■□□□□ 0.53
SNHG17-208ENST00000456953 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
SNHG17-208ENST00000456953 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
SNHG17-208ENST00000456953 KDM2BQ8NHM5 1336 aa18.37■□□□□ 0.53
SNHG17-208ENST00000456953 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
SNHG17-208ENST00000456953 RC3H1Q5TC82 1133 aaKnown RBP18.36■□□□□ 0.53
SNHG17-208ENST00000456953 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
SNHG17-208ENST00000456953 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
SNHG17-208ENST00000456953 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
SNHG17-208ENST00000456953 GYS1P13807 737 aa18.35■□□□□ 0.53
SNHG17-208ENST00000456953 ARHGEF1Q92888 912 aaKnown RBP18.35■□□□□ 0.53
SNHG17-208ENST00000456953 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
SNHG17-208ENST00000456953 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
SNHG17-208ENST00000456953 KCNA3P22001 575 aa18.34■□□□□ 0.53
SNHG17-208ENST00000456953 RFC4P35249 363 aa18.34■□□□□ 0.53
SNHG17-208ENST00000456953 EYA1Q99502 592 aa18.34■□□□□ 0.53
SNHG17-208ENST00000456953 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.53
SNHG17-208ENST00000456953 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
SNHG17-208ENST00000456953 CAPN15O75808 1086 aa18.33■□□□□ 0.52
SNHG17-208ENST00000456953 TNS4Q8IZW8 715 aa18.33■□□□□ 0.52
SNHG17-208ENST00000456953 DCAF5Q96JK2 942 aa18.33■□□□□ 0.52
SNHG17-208ENST00000456953 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
SNHG17-208ENST00000456953 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
SNHG17-208ENST00000456953 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
SNHG17-208ENST00000456953 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
SNHG17-208ENST00000456953 DALRD3Q5D0E6 543 aaKnown RBP18.32■□□□□ 0.52
SNHG17-208ENST00000456953 SLC4A9Q96Q91 983 aa18.32■□□□□ 0.52
SNHG17-208ENST00000456953 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
SNHG17-208ENST00000456953 PRELPP51888 382 aa18.31■□□□□ 0.52
SNHG17-208ENST00000456953 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
SNHG17-208ENST00000456953 RNF181Q9P0P0 153 aa18.31■□□□□ 0.52
SNHG17-208ENST00000456953 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
SNHG17-208ENST00000456953 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
SNHG17-208ENST00000456953 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
SNHG17-208ENST00000456953 RRAGCQ9HB90 399 aa18.3■□□□□ 0.52
SNHG17-208ENST00000456953 HSP90AB1P08238 724 aaKnown RBP18.27■□□□□ 0.52
SNHG17-208ENST00000456953 ZC3H4Q9UPT8 1303 aaKnown RBP18.26■□□□□ 0.51
SNHG17-208ENST00000456953 MYH14Q7Z406 1995 aaKnown RBP18.26■□□□□ 0.51
SNHG17-208ENST00000456953 SBF1O95248 1867 aa18.25■□□□□ 0.51
SNHG17-208ENST00000456953 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
SNHG17-208ENST00000456953 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
SNHG17-208ENST00000456953 DDR1Q08345 913 aa18.24■□□□□ 0.51
SNHG17-208ENST00000456953 FKBP8Q14318 412 aa18.24■□□□□ 0.51
SNHG17-208ENST00000456953 CHRNA5P30532 468 aa18.23■□□□□ 0.51
SNHG17-208ENST00000456953 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
SNHG17-208ENST00000456953 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
SNHG17-208ENST00000456953 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
SNHG17-208ENST00000456953 CABP4P57796 275 aa18.22■□□□□ 0.51
SNHG17-208ENST00000456953 KDM6AO15550 1401 aaPredicted RBP18.22■□□□□ 0.51
SNHG17-208ENST00000456953 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
SNHG17-208ENST00000456953 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
SNHG17-208ENST00000456953 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
SNHG17-208ENST00000456953 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.51
SNHG17-208ENST00000456953 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
SNHG17-208ENST00000456953 PLEKHO1Q53GL0 409 aaPredicted RBP18.2■□□□□ 0.5
SNHG17-208ENST00000456953 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
SNHG17-208ENST00000456953 LMNB1P20700 586 aa18.19■□□□□ 0.5
SNHG17-208ENST00000456953 TM4SF1P30408 202 aa18.19■□□□□ 0.5
SNHG17-208ENST00000456953 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
SNHG17-208ENST00000456953 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
SNHG17-208ENST00000456953 RASSF7Q02833 373 aa18.18■□□□□ 0.5
SNHG17-208ENST00000456953 MTHFSP49914 203 aa18.17■□□□□ 0.5
SNHG17-208ENST00000456953 TJP1Q07157 1748 aa18.17■□□□□ 0.5
SNHG17-208ENST00000456953 ADAMTS7Q9UKP4 1686 aa18.16■□□□□ 0.5
SNHG17-208ENST00000456953 ZPR1O75312 459 aa18.16■□□□□ 0.5
SNHG17-208ENST00000456953 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
SNHG17-208ENST00000456953 TNNT2P45379 298 aaPredicted RBP18.15■□□□□ 0.5
SNHG17-208ENST00000456953 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
SNHG17-208ENST00000456953 NFATC2IPQ8NCF5 419 aa18.15■□□□□ 0.5
SNHG17-208ENST00000456953 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
SNHG17-208ENST00000456953 DLEC1Q9Y238 1755 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms