RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 LAMB4A4D0S4 1761 aa8.52□□□□□ -1.05
FN1-213ENST00000456923 GCP02774 474 aa8.52□□□□□ -1.05
FN1-213ENST00000456923 SPRYD3Q8NCJ5 442 aa8.52□□□□□ -1.05
FN1-213ENST00000456923 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
FN1-213ENST00000456923 SLKQ9H2G2 1235 aaPredicted RBP8.52□□□□□ -1.05
FN1-213ENST00000456923 FAM83GA6ND36 823 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 CARD10Q9BWT7 1032 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 CARD14Q9BXL6 1004 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 KDM3BQ7LBC6 1761 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 SOCS7O14512 581 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 IP6K1Q92551 441 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 PLCD4Q9BRC7 762 aa8.51□□□□□ -1.05
FN1-213ENST00000456923 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
FN1-213ENST00000456923 FYB1O15117 783 aa8.5□□□□□ -1.05
FN1-213ENST00000456923 PTMAP06454 111 aaKnown RBP8.5□□□□□ -1.05
FN1-213ENST00000456923 NGLY1Q96IV0 654 aa8.5□□□□□ -1.05
FN1-213ENST00000456923 TMX1Q9H3N1 280 aa8.5□□□□□ -1.05
FN1-213ENST00000456923 PTMSP20962 102 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 ERBB3P21860 1342 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 TJP1Q07157 1748 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 L1TD1Q5T7N2 865 aaKnown RBP8.49□□□□□ -1.05
FN1-213ENST00000456923 DDX17Q92841 729 aaKnown RBP8.49□□□□□ -1.05
FN1-213ENST00000456923 TRIM34Q9BYJ4 488 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.051e-323■□□□□ 9.6
FN1-213ENST00000456923 KCNA4P22459 653 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 GPATCH11Q8N954 259 aa8.49□□□□□ -1.05
FN1-213ENST00000456923 KIF13BQ9NQT8 1826 aa8.48□□□□□ -1.05
FN1-213ENST00000456923 TPM2P07951 284 aa8.48□□□□□ -1.05
FN1-213ENST00000456923 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
FN1-213ENST00000456923 USP21Q9UK80 565 aa8.48□□□□□ -1.05
FN1-213ENST00000456923 CLCN1P35523 988 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 SKAP1Q86WV1 359 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 PIK3R5Q8WYR1 880 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 SLC12A5Q9H2X9 1139 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 GOLGA6L3A6NEY3 463 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 CLGNO14967 610 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 RXRBP28702 533 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 ESPNB1AK53 854 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 DLG5Q8TDM6 1919 aa8.47□□□□□ -1.05
FN1-213ENST00000456923 SMAP1Q8IYB5 467 aaPredicted RBP8.46□□□□□ -1.05
FN1-213ENST00000456923 ABTB2Q8N961 1025 aa8.46□□□□□ -1.05
FN1-213ENST00000456923 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.05
FN1-213ENST00000456923 IGSF1Q8N6C5 1336 aa8.46□□□□□ -1.05
FN1-213ENST00000456923 LOC102724159A0A0B4J2E5 919 aa8.46□□□□□ -1.05
FN1-213ENST00000456923 PWP2Q15269 919 aaKnown RBP8.46□□□□□ -1.05
FN1-213ENST00000456923 BCORQ6W2J9 1755 aa8.46□□□□□ -1.06
FN1-213ENST00000456923 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
FN1-213ENST00000456923 TOMM22Q9NS69 142 aa8.45□□□□□ -1.06
FN1-213ENST00000456923 MEGF6O75095 1541 aa8.45□□□□□ -1.06
FN1-213ENST00000456923 UBR3Q6ZT12 1888 aa8.45□□□□□ -1.06
FN1-213ENST00000456923 HMGB2P26583 209 aaKnown RBP8.45□□□□□ -1.06
FN1-213ENST00000456923 HOXC9P31274 260 aa8.45□□□□□ -1.06
FN1-213ENST00000456923 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
FN1-213ENST00000456923 MAP3K19Q56UN5 1328 aa8.44□□□□□ -1.06
FN1-213ENST00000456923 NRXN2Q9P2S2 1712 aa8.44□□□□□ -1.06
FN1-213ENST00000456923 SAFB2Q14151 953 aaKnown RBP eCLIP8.44□□□□□ -1.06
FN1-213ENST00000456923 COG3Q96JB2 828 aa8.44□□□□□ -1.06
FN1-213ENST00000456923 QTRT2Q9H974 415 aaKnown RBP8.44□□□□□ -1.06
FN1-213ENST00000456923 PDE4AP27815 886 aa8.44□□□□□ -1.06
FN1-213ENST00000456923 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
FN1-213ENST00000456923 ILDR2Q71H61 639 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 NME9Q86XW9 330 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 UQCRHLA0A096LP55 91 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 ERICH4A6NGS2 130 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 UQCRHP07919 91 aa8.43□□□□□ -1.06
FN1-213ENST00000456923 MSNP26038 577 aaKnown RBP8.42□□□□□ -1.06
FN1-213ENST00000456923 N4BP2Q86UW6 1770 aaPredicted RBP8.42□□□□□ -1.06
FN1-213ENST00000456923 SCN7AQ01118 1682 aa8.42□□□□□ -1.06
FN1-213ENST00000456923 NLRP6P59044 892 aa8.42□□□□□ -1.06
FN1-213ENST00000456923 MEX3CQ5U5Q3 659 aaKnown RBP8.42□□□□□ -1.06
FN1-213ENST00000456923 TSC1Q92574 1164 aa8.42□□□□□ -1.06
FN1-213ENST00000456923 KIAA1551Q9HCM1 1747 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 DLEC1Q9Y238 1755 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 ARFGEF2Q9Y6D5 1785 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
FN1-213ENST00000456923 DMTNQ08495 405 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 C4AP0C0L4 1744 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 C4BP0C0L5 1744 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 TICAM2Q86XR7 235 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 CWC22Q9HCG8 908 aaKnown RBP8.41□□□□□ -1.06
FN1-213ENST00000456923 BTG4Q9NY30 223 aa8.41□□□□□ -1.06
FN1-213ENST00000456923 C8orf37Q96NL8 207 aa8.4□□□□□ -1.06
FN1-213ENST00000456923 PRDM11Q9NQV5 511 aa8.4□□□□□ -1.06
FN1-213ENST00000456923 AXIN2Q9Y2T1 843 aa8.4□□□□□ -1.06
FN1-213ENST00000456923 POLKQ9UBT6 870 aa8.4□□□□□ -1.06
FN1-213ENST00000456923 KCPQ6ZWJ8 1503 aa8.4□□□□□ -1.07
FN1-213ENST00000456923 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.07
FN1-213ENST00000456923 CHRM1P11229 460 aaPredicted RBP8.39□□□□□ -1.07
FN1-213ENST00000456923 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
FN1-213ENST00000456923 PANK3Q9H999 370 aa8.39□□□□□ -1.07
FN1-213ENST00000456923 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.074e-14■□□□□ 8.6
FN1-213ENST00000456923 PLSCR1O15162 318 aa8.39□□□□□ -1.07
FN1-213ENST00000456923 IRX5P78411 483 aaPredicted RBP8.38□□□□□ -1.07
FN1-213ENST00000456923 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
FN1-213ENST00000456923 PSMD1Q99460 953 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms