RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 DIAPH1O60610 1272 aaKnown RBP35.86■■■■□ 3.33
SMIM12-205ENST00000456842 ATP6V1AP38606 617 aa35.86■■■■□ 3.33
SMIM12-205ENST00000456842 CABP4P57796 275 aa35.85■■■■□ 3.33
SMIM12-205ENST00000456842 PHF14O94880 888 aa35.84■■■■□ 3.33
SMIM12-205ENST00000456842 HMGB2P26583 209 aaKnown RBP35.84■■■■□ 3.33
SMIM12-205ENST00000456842 RBM42Q9BTD8 480 aaKnown RBP35.82■■■■□ 3.32
SMIM12-205ENST00000456842 TAF1LQ8IZX4 1826 aa35.82■■■■□ 3.32
SMIM12-205ENST00000456842 C4BP0C0L5 1744 aa35.81■■■■□ 3.32
SMIM12-205ENST00000456842 FLAD1Q8NFF5 587 aa35.81■■■■□ 3.32
SMIM12-205ENST00000456842 SLC4A9Q96Q91 983 aa35.81■■■■□ 3.32
SMIM12-205ENST00000456842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.78■■■■□ 3.32
SMIM12-205ENST00000456842 NFATC2IPQ8NCF5 419 aa35.78■■■■□ 3.32
SMIM12-205ENST00000456842 MAP3K5Q99683 1374 aa35.76■■■■□ 3.32
SMIM12-205ENST00000456842 AKAP4Q5JQC9 854 aa35.76■■■■□ 3.32
SMIM12-205ENST00000456842 U2SURPO15042 1029 aaKnown RBP35.75■■■■□ 3.31
SMIM12-205ENST00000456842 GNPATO15228 680 aa35.75■■■■□ 3.31
SMIM12-205ENST00000456842 YY1P25490 414 aa35.75■■■■□ 3.31
SMIM12-205ENST00000456842 LGR6Q9HBX8 967 aa35.75■■■■□ 3.31
SMIM12-205ENST00000456842 COL24A1Q17RW2 1714 aa35.74■■■■□ 3.31
SMIM12-205ENST00000456842 COL3A1P02461 1466 aaPredicted RBP35.73■■■■□ 3.31
SMIM12-205ENST00000456842 MTHFSDQ2M296 383 aaKnown RBP35.73■■■■□ 3.31
SMIM12-205ENST00000456842 PTCD1O75127 700 aaKnown RBP35.72■■■■□ 3.31
SMIM12-205ENST00000456842 NLGN2Q8NFZ4 835 aa35.72■■■■□ 3.31
SMIM12-205ENST00000456842 SSFA2P28290 1259 aa35.71■■■■□ 3.31
SMIM12-205ENST00000456842 RNMTO43148 476 aaKnown RBP35.68■■■■□ 3.3
SMIM12-205ENST00000456842 UBR3Q6ZT12 1888 aa35.67■■■■□ 3.3
SMIM12-205ENST00000456842 PPP2R1AP30153 589 aa35.65■■■■□ 3.3
SMIM12-205ENST00000456842 SLC52A2Q9HAB3 445 aa35.65■■■■□ 3.3
SMIM12-205ENST00000456842 GPR162Q16538 588 aa35.64■■■■□ 3.3
SMIM12-205ENST00000456842 PELP1Q8IZL8 1130 aaKnown RBP35.64■■■■□ 3.3
SMIM12-205ENST00000456842 RTCBQ9Y3I0 505 aaKnown RBP35.63■■■■□ 3.29
SMIM12-205ENST00000456842 CFAP53Q96M91 514 aa35.62■■■■□ 3.29
SMIM12-205ENST00000456842 SLC39A6Q13433 755 aa35.61■■■■□ 3.29
SMIM12-205ENST00000456842 RC3H1Q5TC82 1133 aaKnown RBP35.61■■■■□ 3.29
SMIM12-205ENST00000456842 TRAPPC3LQ5T215 181 aa35.6■■■■□ 3.29
SMIM12-205ENST00000456842 CNTNAP4Q9C0A0 1308 aa35.58■■■■□ 3.29
SMIM12-205ENST00000456842 SCN11AQ9UI33 1791 aa35.58■■■■□ 3.29
SMIM12-205ENST00000456842 ARHGEF1Q92888 912 aaKnown RBP35.57■■■■□ 3.28
SMIM12-205ENST00000456842 RPS6KA4O75676 772 aa35.56■■■■□ 3.28
SMIM12-205ENST00000456842 PRKAR2BP31323 418 aa35.54■■■■□ 3.28
SMIM12-205ENST00000456842 CRKLP46109 303 aaKnown RBP35.54■■■■□ 3.28
SMIM12-205ENST00000456842 DNAJC10Q8IXB1 793 aa35.54■■■■□ 3.28
SMIM12-205ENST00000456842 PHACTR3Q96KR7 559 aa35.54■■■■□ 3.28
SMIM12-205ENST00000456842 CD2APQ9Y5K6 639 aa35.54■■■■□ 3.28
SMIM12-205ENST00000456842 UTRNP46939 3433 aa35.53■■■■□ 3.28
SMIM12-205ENST00000456842 ZNF831Q5JPB2 1677 aa35.52■■■■□ 3.28
SMIM12-205ENST00000456842 IL17REQ8NFR9 667 aa35.52■■■■□ 3.28
SMIM12-205ENST00000456842 GAS2L2Q8NHY3 880 aa35.52■■■■□ 3.28
SMIM12-205ENST00000456842 RSPH6AQ9H0K4 717 aa35.52■■■■□ 3.28
SMIM12-205ENST00000456842 NUDCQ9Y266 331 aa35.52■■■■□ 3.28
SMIM12-205ENST00000456842 U2AF1L5P0DN76 240 aaPredicted RBP35.51■■■■□ 3.28
SMIM12-205ENST00000456842 U2AF1Q01081 240 aaKnown RBP eCLIP35.51■■■■□ 3.28
SMIM12-205ENST00000456842 MRC1P22897 1456 aa35.51■■■■□ 3.28
SMIM12-205ENST00000456842 MMP10P09238 476 aa35.5■■■■□ 3.27
SMIM12-205ENST00000456842 ADRA2BP18089 450 aa35.5■■■■□ 3.27
SMIM12-205ENST00000456842 RFC4P35249 363 aa35.5■■■■□ 3.27
SMIM12-205ENST00000456842 COL5A3P25940 1745 aaPredicted RBP35.49■■■■□ 3.27
SMIM12-205ENST00000456842 GNAT3A8MTJ3 354 aa35.49■■■■□ 3.27
SMIM12-205ENST00000456842 YBX3P16989 372 aaKnown RBP eCLIP35.49■■■■□ 3.277e-8■■■■■ 29
SMIM12-205ENST00000456842 MYH14Q7Z406 1995 aaKnown RBP35.48■■■■□ 3.27
SMIM12-205ENST00000456842 INTS5Q6P9B9 1019 aaKnown RBP35.48■■■■□ 3.27
SMIM12-205ENST00000456842 GYS1P13807 737 aa35.46■■■■□ 3.27
SMIM12-205ENST00000456842 NLGN1Q8N2Q7 840 aa35.45■■■■□ 3.27
SMIM12-205ENST00000456842 SRP68Q9UHB9 627 aaKnown RBP35.45■■■■□ 3.27
SMIM12-205ENST00000456842 WWC3Q9ULE0 1092 aa35.45■■■■□ 3.27
SMIM12-205ENST00000456842 TJP1Q07157 1748 aa35.44■■■■□ 3.26
SMIM12-205ENST00000456842 ADAMTS7Q9UKP4 1686 aa35.44■■■■□ 3.26
SMIM12-205ENST00000456842 TEFQ10587 303 aa35.43■■■■□ 3.26
SMIM12-205ENST00000456842 CYP19A1P11511 503 aaPredicted RBP35.42■■■■□ 3.26
SMIM12-205ENST00000456842 CCDC87Q9NVE4 849 aa35.42■■■■□ 3.26
SMIM12-205ENST00000456842 KCPQ6ZWJ8 1503 aa35.42■■■■□ 3.26
SMIM12-205ENST00000456842 TTC5Q8N0Z6 440 aa35.39■■■■□ 3.26
SMIM12-205ENST00000456842 FCHSD2O94868 740 aa35.38■■■■□ 3.25
SMIM12-205ENST00000456842 ZNF784Q8NCA9 323 aaPredicted RBP35.38■■■■□ 3.25
SMIM12-205ENST00000456842 VIRMAQ69YN4 1812 aaKnown RBP35.38■■■■□ 3.25
SMIM12-205ENST00000456842 GRIN3BO60391 1043 aa35.36■■■■□ 3.25
SMIM12-205ENST00000456842 FKBP8Q14318 412 aa35.36■■■■□ 3.25
SMIM12-205ENST00000456842 ZNF496Q96IT1 587 aaPredicted RBP35.36■■■■□ 3.25
SMIM12-205ENST00000456842 ZBTB1Q9Y2K1 713 aa35.36■■■■□ 3.25
SMIM12-205ENST00000456842 SOS1Q07889 1333 aaPredicted RBP35.35■■■■□ 3.25
SMIM12-205ENST00000456842 USP42Q9H9J4 1324 aaKnown RBP35.35■■■■□ 3.25
SMIM12-205ENST00000456842 VSIG10Q8N0Z9 540 aa35.35■■■■□ 3.25
SMIM12-205ENST00000456842 DDX10Q13206 875 aaKnown RBP35.34■■■■□ 3.25
SMIM12-205ENST00000456842 ZNF790Q6PG37 636 aa35.34■■■■□ 3.25
SMIM12-205ENST00000456842 CICQ96RK0 1608 aaPredicted RBP35.34■■■■□ 3.25
SMIM12-205ENST00000456842 KCNQ3O43525 872 aa35.33■■■■□ 3.25
SMIM12-205ENST00000456842 PARP3Q9Y6F1 533 aa35.33■■■■□ 3.25
SMIM12-205ENST00000456842 CEMIPQ8WUJ3 1361 aa35.33■■■■□ 3.25
SMIM12-205ENST00000456842 GOLGB1Q14789 3259 aaKnown RBP35.33■■■■□ 3.25
SMIM12-205ENST00000456842 MCM10Q7L590 875 aa35.32■■■■□ 3.24
SMIM12-205ENST00000456842 CANXP27824 592 aaKnown RBP35.31■■■■□ 3.24
SMIM12-205ENST00000456842 DCTN1Q14203 1278 aa35.31■■■■□ 3.24
SMIM12-205ENST00000456842 C4AP0C0L4 1744 aa35.31■■■■□ 3.24
SMIM12-205ENST00000456842 USPL1Q5W0Q7 1092 aa35.3■■■■□ 3.24
SMIM12-205ENST00000456842 CHD4Q14839 1912 aa35.3■■■■□ 3.24
SMIM12-205ENST00000456842 BTBD11A6QL63 1104 aa35.29■■■■□ 3.24
SMIM12-205ENST00000456842 RTF1Q92541 710 aaKnown RBP35.29■■■■□ 3.24
SMIM12-205ENST00000456842 ZPR1O75312 459 aa35.28■■■■□ 3.24
SMIM12-205ENST00000456842 DDR1Q08345 913 aa35.28■■■■□ 3.24
SMIM12-205ENST00000456842 HEG1Q9ULI3 1381 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms