RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
CASC4P1-201ENST00000456608 KRT24Q2M2I5 525 aa16.76■□□□□ 0.27
CASC4P1-201ENST00000456608 CRBNQ96SW2 442 aa16.76■□□□□ 0.27
CASC4P1-201ENST00000456608 LRP6O75581 1613 aa16.76■□□□□ 0.27
CASC4P1-201ENST00000456608 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
CASC4P1-201ENST00000456608 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
CASC4P1-201ENST00000456608 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
CASC4P1-201ENST00000456608 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
CASC4P1-201ENST00000456608 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
CASC4P1-201ENST00000456608 SOS1Q07889 1333 aaPredicted RBP16.74■□□□□ 0.27
CASC4P1-201ENST00000456608 TOGARAM1Q9Y4F4 1720 aa16.74■□□□□ 0.27
CASC4P1-201ENST00000456608 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
CASC4P1-201ENST00000456608 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
CASC4P1-201ENST00000456608 ZKSCAN2Q63HK3 967 aa16.73■□□□□ 0.27
CASC4P1-201ENST00000456608 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
CASC4P1-201ENST00000456608 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
CASC4P1-201ENST00000456608 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
CASC4P1-201ENST00000456608 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
CASC4P1-201ENST00000456608 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
CASC4P1-201ENST00000456608 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 NOB1Q9ULX3 412 aaKnown RBP16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 BCL9LQ86UU0 1499 aa16.71■□□□□ 0.27
CASC4P1-201ENST00000456608 ITGB4P16144 1822 aa16.71■□□□□ 0.26
CASC4P1-201ENST00000456608 KCNQ3O43525 872 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 MS4A1P11836 297 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 CDCA7Q9BWT1 371 aaPredicted RBP16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 PANK1Q8TE04 598 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
CASC4P1-201ENST00000456608 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 TNS2Q63HR2 1409 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 TCERG1O14776 1098 aaKnown RBP16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 HOXB7P09629 217 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 RLBP1P12271 317 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 TRIM27P14373 513 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
CASC4P1-201ENST00000456608 C5P01031 1676 aa16.68■□□□□ 0.26
CASC4P1-201ENST00000456608 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
CASC4P1-201ENST00000456608 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
CASC4P1-201ENST00000456608 DZIP1LQ8IYY4 767 aaKnown RBP16.68■□□□□ 0.26
CASC4P1-201ENST00000456608 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
CASC4P1-201ENST00000456608 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
CASC4P1-201ENST00000456608 CABP4P57796 275 aa16.67■□□□□ 0.26
CASC4P1-201ENST00000456608 VPS72Q15906 364 aa16.67■□□□□ 0.26
CASC4P1-201ENST00000456608 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
CASC4P1-201ENST00000456608 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
CASC4P1-201ENST00000456608 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
CASC4P1-201ENST00000456608 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
CASC4P1-201ENST00000456608 COG6Q9Y2V7 657 aa16.66■□□□□ 0.26
CASC4P1-201ENST00000456608 GLI3P10071 1580 aa16.65■□□□□ 0.26
CASC4P1-201ENST00000456608 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
CASC4P1-201ENST00000456608 EXOC5O00471 708 aa16.65■□□□□ 0.26
CASC4P1-201ENST00000456608 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
CASC4P1-201ENST00000456608 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
CASC4P1-201ENST00000456608 DOT1LQ8TEK3 1739 aa16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 MVPQ14764 893 aaKnown RBP16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 CCDC136Q96JN2 1154 aa16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 API5Q9BZZ5 524 aaKnown RBP16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
CASC4P1-201ENST00000456608 RGS12O14924 1447 aa16.63■□□□□ 0.25
CASC4P1-201ENST00000456608 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
CASC4P1-201ENST00000456608 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
CASC4P1-201ENST00000456608 STK31Q9BXU1 1019 aa16.63■□□□□ 0.25
CASC4P1-201ENST00000456608 CHMP4AQ9BY43 222 aa16.63■□□□□ 0.25
CASC4P1-201ENST00000456608 USP21Q9UK80 565 aa16.63■□□□□ 0.25
CASC4P1-201ENST00000456608 ABCC4O15439 1325 aa16.62■□□□□ 0.25
CASC4P1-201ENST00000456608 PTPRCP08575 1304 aa16.62■□□□□ 0.25
CASC4P1-201ENST00000456608 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
CASC4P1-201ENST00000456608 AAMPQ13685 434 aa16.62■□□□□ 0.25
CASC4P1-201ENST00000456608 HDGFL1Q5TGJ6 251 aa16.62■□□□□ 0.25
CASC4P1-201ENST00000456608 TMEM57Q8N5G2 664 aa16.62■□□□□ 0.25
CASC4P1-201ENST00000456608 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
CASC4P1-201ENST00000456608 DDB1Q16531 1140 aa16.61■□□□□ 0.25
CASC4P1-201ENST00000456608 MEX3CQ5U5Q3 659 aaKnown RBP16.61■□□□□ 0.25
CASC4P1-201ENST00000456608 G2E3Q7L622 706 aa16.61■□□□□ 0.25
CASC4P1-201ENST00000456608 KCPQ6ZWJ8 1503 aa16.61■□□□□ 0.25
CASC4P1-201ENST00000456608 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
CASC4P1-201ENST00000456608 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
CASC4P1-201ENST00000456608 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
CASC4P1-201ENST00000456608 DDX19BQ9UMR2 479 aa16.6■□□□□ 0.25
CASC4P1-201ENST00000456608 EIF2S2P20042 333 aaKnown RBP16.59■□□□□ 0.25
CASC4P1-201ENST00000456608 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
CASC4P1-201ENST00000456608 AFF2P51816 1311 aa16.58■□□□□ 0.25
CASC4P1-201ENST00000456608 ATRNO75882 1429 aa16.58■□□□□ 0.25
CASC4P1-201ENST00000456608 PRAMEF22A3QJZ6 481 aa16.58■□□□□ 0.24
CASC4P1-201ENST00000456608 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.24
CASC4P1-201ENST00000456608 FLIIQ13045 1269 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms