RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 IL13P35225 146 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
SMCR2-201ENST00000456090 AMIGO3Q86WK7 504 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 KDRP35968 1356 aa16.86■□□□□ 0.29
SMCR2-201ENST00000456090 KDM6AO15550 1401 aaPredicted RBP16.86■□□□□ 0.29
SMCR2-201ENST00000456090 PHF14O94880 888 aa16.85■□□□□ 0.29
SMCR2-201ENST00000456090 MTHFSP49914 203 aa16.85■□□□□ 0.29
SMCR2-201ENST00000456090 ITPK1Q13572 414 aa16.85■□□□□ 0.29
SMCR2-201ENST00000456090 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
SMCR2-201ENST00000456090 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
SMCR2-201ENST00000456090 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
SMCR2-201ENST00000456090 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
SMCR2-201ENST00000456090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.83■□□□□ 0.28
SMCR2-201ENST00000456090 GPR162Q16538 588 aa16.83■□□□□ 0.28
SMCR2-201ENST00000456090 GNPATO15228 680 aa16.82■□□□□ 0.28
SMCR2-201ENST00000456090 SSFA2P28290 1259 aa16.82■□□□□ 0.28
SMCR2-201ENST00000456090 CABP4P57796 275 aa16.82■□□□□ 0.28
SMCR2-201ENST00000456090 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
SMCR2-201ENST00000456090 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
SMCR2-201ENST00000456090 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
SMCR2-201ENST00000456090 HMOX1P09601 288 aa16.8■□□□□ 0.28
SMCR2-201ENST00000456090 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
SMCR2-201ENST00000456090 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
SMCR2-201ENST00000456090 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
SMCR2-201ENST00000456090 TJP1Q07157 1748 aa16.79■□□□□ 0.28
SMCR2-201ENST00000456090 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
SMCR2-201ENST00000456090 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
SMCR2-201ENST00000456090 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
SMCR2-201ENST00000456090 CD2APQ9Y5K6 639 aa16.77■□□□□ 0.28
SMCR2-201ENST00000456090 CICQ96RK0 1608 aaPredicted RBP16.77■□□□□ 0.27
SMCR2-201ENST00000456090 COL3A1P02461 1466 aaPredicted RBP16.76■□□□□ 0.27
SMCR2-201ENST00000456090 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
SMCR2-201ENST00000456090 RTCBQ9Y3I0 505 aaKnown RBP16.76■□□□□ 0.27
SMCR2-201ENST00000456090 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
SMCR2-201ENST00000456090 ZNF784Q8NCA9 323 aaPredicted RBP16.75■□□□□ 0.27
SMCR2-201ENST00000456090 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
SMCR2-201ENST00000456090 MRC1P22897 1456 aa16.74■□□□□ 0.27
SMCR2-201ENST00000456090 CNTNAP4Q9C0A0 1308 aa16.74■□□□□ 0.27
SMCR2-201ENST00000456090 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMCR2-201ENST00000456090 TRAPPC3LQ5T215 181 aa16.74■□□□□ 0.27
SMCR2-201ENST00000456090 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
SMCR2-201ENST00000456090 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
SMCR2-201ENST00000456090 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
SMCR2-201ENST00000456090 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
SMCR2-201ENST00000456090 MTHFSDQ2M296 383 aaKnown RBP16.72■□□□□ 0.27
SMCR2-201ENST00000456090 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
SMCR2-201ENST00000456090 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
SMCR2-201ENST00000456090 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
SMCR2-201ENST00000456090 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
SMCR2-201ENST00000456090 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
SMCR2-201ENST00000456090 MMP10P09238 476 aa16.71■□□□□ 0.27
SMCR2-201ENST00000456090 ADRA2BP18089 450 aa16.71■□□□□ 0.27
SMCR2-201ENST00000456090 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
SMCR2-201ENST00000456090 RPS6KA4O75676 772 aa16.7■□□□□ 0.26
SMCR2-201ENST00000456090 RFC4P35249 363 aa16.7■□□□□ 0.26
SMCR2-201ENST00000456090 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
SMCR2-201ENST00000456090 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
SMCR2-201ENST00000456090 GYS1P13807 737 aa16.68■□□□□ 0.26
SMCR2-201ENST00000456090 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
SMCR2-201ENST00000456090 NLGN1Q8N2Q7 840 aa16.68■□□□□ 0.26
SMCR2-201ENST00000456090 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
SMCR2-201ENST00000456090 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
SMCR2-201ENST00000456090 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
SMCR2-201ENST00000456090 DNAJC10Q8IXB1 793 aa16.66■□□□□ 0.26
SMCR2-201ENST00000456090 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
SMCR2-201ENST00000456090 INTS5Q6P9B9 1019 aaKnown RBP16.65■□□□□ 0.26
SMCR2-201ENST00000456090 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
SMCR2-201ENST00000456090 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
SMCR2-201ENST00000456090 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.25
SMCR2-201ENST00000456090 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
SMCR2-201ENST00000456090 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
SMCR2-201ENST00000456090 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SMCR2-201ENST00000456090 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
SMCR2-201ENST00000456090 PXDNLA1KZ92 1463 aa16.63■□□□□ 0.25
SMCR2-201ENST00000456090 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
SMCR2-201ENST00000456090 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
SMCR2-201ENST00000456090 CYP19A1P11511 503 aaPredicted RBP16.62■□□□□ 0.25
SMCR2-201ENST00000456090 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
SMCR2-201ENST00000456090 TEFQ10587 303 aa16.62■□□□□ 0.25
SMCR2-201ENST00000456090 IL17REQ8NFR9 667 aa16.62■□□□□ 0.25
SMCR2-201ENST00000456090 PHACTR3Q96KR7 559 aa16.62■□□□□ 0.25
SMCR2-201ENST00000456090 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
SMCR2-201ENST00000456090 ARFGEF1Q9Y6D6 1849 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 TGFB2P61812 414 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 FKBP8Q14318 412 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
SMCR2-201ENST00000456090 SOS1Q07889 1333 aaPredicted RBP16.61■□□□□ 0.25
SMCR2-201ENST00000456090 ZPR1O75312 459 aa16.6■□□□□ 0.25
SMCR2-201ENST00000456090 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
SMCR2-201ENST00000456090 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMCR2-201ENST00000456090 ZBTB1Q9Y2K1 713 aa16.6■□□□□ 0.25
SMCR2-201ENST00000456090 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
SMCR2-201ENST00000456090 ZNF790Q6PG37 636 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms