RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 AK7Q96M32 723 aa16.25■□□□□ 0.19
PDGFB-204ENST00000455790 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
PDGFB-204ENST00000455790 PHF14O94880 888 aa16.24■□□□□ 0.19
PDGFB-204ENST00000455790 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
PDGFB-204ENST00000455790 NLGN2Q8NFZ4 835 aa16.24■□□□□ 0.19
PDGFB-204ENST00000455790 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
PDGFB-204ENST00000455790 ERVV-2B6SEH9 535 aa16.23■□□□□ 0.19
PDGFB-204ENST00000455790 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
PDGFB-204ENST00000455790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.22■□□□□ 0.19
PDGFB-204ENST00000455790 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
PDGFB-204ENST00000455790 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
PDGFB-204ENST00000455790 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
PDGFB-204ENST00000455790 HMOX1P09601 288 aa16.21■□□□□ 0.19
PDGFB-204ENST00000455790 GNPATO15228 680 aa16.2■□□□□ 0.18
PDGFB-204ENST00000455790 CABP4P57796 275 aa16.2■□□□□ 0.18
PDGFB-204ENST00000455790 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
PDGFB-204ENST00000455790 FLAD1Q8NFF5 587 aa16.2■□□□□ 0.18
PDGFB-204ENST00000455790 SSFA2P28290 1259 aa16.19■□□□□ 0.18
PDGFB-204ENST00000455790 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
PDGFB-204ENST00000455790 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
PDGFB-204ENST00000455790 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
PDGFB-204ENST00000455790 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
PDGFB-204ENST00000455790 DIAPH1O60610 1272 aaKnown RBP16.17■□□□□ 0.18
PDGFB-204ENST00000455790 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
PDGFB-204ENST00000455790 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
PDGFB-204ENST00000455790 MRC1P22897 1456 aa16.16■□□□□ 0.18
PDGFB-204ENST00000455790 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
PDGFB-204ENST00000455790 GPR162Q16538 588 aa16.16■□□□□ 0.18
PDGFB-204ENST00000455790 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
PDGFB-204ENST00000455790 TJP1Q07157 1748 aa16.16■□□□□ 0.18
PDGFB-204ENST00000455790 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
PDGFB-204ENST00000455790 LGR6Q9HBX8 967 aa16.15■□□□□ 0.18
PDGFB-204ENST00000455790 YBX3P16989 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDGFB-204ENST00000455790 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
PDGFB-204ENST00000455790 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.17
PDGFB-204ENST00000455790 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
PDGFB-204ENST00000455790 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
PDGFB-204ENST00000455790 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
PDGFB-204ENST00000455790 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
PDGFB-204ENST00000455790 RNMTO43148 476 aaKnown RBP16.12■□□□□ 0.17
PDGFB-204ENST00000455790 SLC52A2Q9HAB3 445 aa16.12■□□□□ 0.17
PDGFB-204ENST00000455790 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
PDGFB-204ENST00000455790 MYH14Q7Z406 1995 aaKnown RBP16.12■□□□□ 0.17
PDGFB-204ENST00000455790 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
PDGFB-204ENST00000455790 RC3H1Q5TC82 1133 aaKnown RBP16.11■□□□□ 0.17
PDGFB-204ENST00000455790 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
PDGFB-204ENST00000455790 CD2APQ9Y5K6 639 aa16.11■□□□□ 0.17
PDGFB-204ENST00000455790 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
PDGFB-204ENST00000455790 CHD4Q14839 1912 aa16.1■□□□□ 0.17
PDGFB-204ENST00000455790 MMP10P09238 476 aa16.1■□□□□ 0.17
PDGFB-204ENST00000455790 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
PDGFB-204ENST00000455790 SLC39A6Q13433 755 aa16.1■□□□□ 0.17
PDGFB-204ENST00000455790 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
PDGFB-204ENST00000455790 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
PDGFB-204ENST00000455790 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
PDGFB-204ENST00000455790 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
PDGFB-204ENST00000455790 ADRA2BP18089 450 aa16.08■□□□□ 0.16
PDGFB-204ENST00000455790 DNAJC10Q8IXB1 793 aa16.08■□□□□ 0.16
PDGFB-204ENST00000455790 GYS1P13807 737 aa16.07■□□□□ 0.16
PDGFB-204ENST00000455790 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
PDGFB-204ENST00000455790 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
PDGFB-204ENST00000455790 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
PDGFB-204ENST00000455790 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 RFC4P35249 363 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 PHACTR3Q96KR7 559 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
PDGFB-204ENST00000455790 USP42Q9H9J4 1324 aaKnown RBP16.04■□□□□ 0.16
PDGFB-204ENST00000455790 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
PDGFB-204ENST00000455790 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
PDGFB-204ENST00000455790 KIF13BQ9NQT8 1826 aa16.03■□□□□ 0.16
PDGFB-204ENST00000455790 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-204ENST00000455790 GRIN3BO60391 1043 aa16.03■□□□□ 0.16
PDGFB-204ENST00000455790 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-204ENST00000455790 NLGN1Q8N2Q7 840 aa16.03■□□□□ 0.16
PDGFB-204ENST00000455790 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
PDGFB-204ENST00000455790 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
PDGFB-204ENST00000455790 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.16
PDGFB-204ENST00000455790 FKBP8Q14318 412 aa16.02■□□□□ 0.16
PDGFB-204ENST00000455790 ZBTB1Q9Y2K1 713 aa16.02■□□□□ 0.16
PDGFB-204ENST00000455790 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
PDGFB-204ENST00000455790 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
PDGFB-204ENST00000455790 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDGFB-204ENST00000455790 DDR1Q08345 913 aa16.01■□□□□ 0.15
PDGFB-204ENST00000455790 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
PDGFB-204ENST00000455790 TEFQ10587 303 aa16■□□□□ 0.15
PDGFB-204ENST00000455790 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
PDGFB-204ENST00000455790 COL15A1P39059 1388 aa16■□□□□ 0.15
PDGFB-204ENST00000455790 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
PDGFB-204ENST00000455790 A0A0G2JLW4 131 aa15.98■□□□□ 0.15
PDGFB-204ENST00000455790 USPL1Q5W0Q7 1092 aa15.98■□□□□ 0.15
PDGFB-204ENST00000455790 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
PDGFB-204ENST00000455790 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
PDGFB-204ENST00000455790 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
PDGFB-204ENST00000455790 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
PDGFB-204ENST00000455790 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms