RNA–Protein interactions for RNA: ENST00000455730.2

LDHBP1-201, Transcript of lactate dehydrogenase B pseudogene 1, humanhuman

BASIC

Gene LDHBP1, Length 1,119 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP1-201ENST00000455730 SLC34A2O95436 690 aa19.65■□□□□ 0.74
LDHBP1-201ENST00000455730 PIGBQ92521 554 aa19.65■□□□□ 0.74
LDHBP1-201ENST00000455730 RRAGCQ9HB90 399 aa19.65■□□□□ 0.74
LDHBP1-201ENST00000455730 RTL1A6NKG5 1358 aa19.65■□□□□ 0.74
LDHBP1-201ENST00000455730 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
LDHBP1-201ENST00000455730 SMC1BQ8NDV3 1235 aa19.64■□□□□ 0.73
LDHBP1-201ENST00000455730 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
LDHBP1-201ENST00000455730 SMG6Q86US8 1419 aaKnown RBP19.63■□□□□ 0.73
LDHBP1-201ENST00000455730 ITPK1Q13572 414 aa19.62■□□□□ 0.73
LDHBP1-201ENST00000455730 RRS1Q15050 365 aaKnown RBP19.62■□□□□ 0.73
LDHBP1-201ENST00000455730 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
LDHBP1-201ENST00000455730 RNF181Q9P0P0 153 aa19.61■□□□□ 0.73
LDHBP1-201ENST00000455730 C4AP0C0L4 1744 aa19.6■□□□□ 0.73
LDHBP1-201ENST00000455730 KCNA3P22001 575 aa19.59■□□□□ 0.73
LDHBP1-201ENST00000455730 ATP6V1AP38606 617 aa19.59■□□□□ 0.73
LDHBP1-201ENST00000455730 TMF1P82094 1093 aa19.59■□□□□ 0.73
LDHBP1-201ENST00000455730 NLGN1Q8N2Q7 840 aa19.59■□□□□ 0.73
LDHBP1-201ENST00000455730 SBF1O95248 1867 aa19.58■□□□□ 0.73
LDHBP1-201ENST00000455730 DCAF5Q96JK2 942 aa19.58■□□□□ 0.72
LDHBP1-201ENST00000455730 TRAPPC3LQ5T215 181 aa19.57■□□□□ 0.72
LDHBP1-201ENST00000455730 ASAP1Q9ULH1 1129 aa19.57■□□□□ 0.72
LDHBP1-201ENST00000455730 NKX1-1Q15270 411 aaPredicted RBP19.56■□□□□ 0.72
LDHBP1-201ENST00000455730 HSP90AB2PQ58FF8 381 aa19.56■□□□□ 0.72
LDHBP1-201ENST00000455730 PIM2Q9P1W9 311 aa19.56■□□□□ 0.72
LDHBP1-201ENST00000455730 ADRA2BP18089 450 aa19.55■□□□□ 0.72
LDHBP1-201ENST00000455730 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
LDHBP1-201ENST00000455730 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
LDHBP1-201ENST00000455730 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
LDHBP1-201ENST00000455730 DALRD3Q5D0E6 543 aaKnown RBP19.54■□□□□ 0.72
LDHBP1-201ENST00000455730 PUS7Q96PZ0 661 aaKnown RBP19.54■□□□□ 0.72
LDHBP1-201ENST00000455730 INSRP06213 1382 aa19.54■□□□□ 0.72
LDHBP1-201ENST00000455730 GYS1P13807 737 aa19.53■□□□□ 0.72
LDHBP1-201ENST00000455730 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
LDHBP1-201ENST00000455730 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
LDHBP1-201ENST00000455730 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
LDHBP1-201ENST00000455730 ATG3Q9NT62 314 aa19.51■□□□□ 0.71
LDHBP1-201ENST00000455730 FLT4P35916 1363 aa19.5■□□□□ 0.71
LDHBP1-201ENST00000455730 KDRP35968 1356 aa19.49■□□□□ 0.71
LDHBP1-201ENST00000455730 TONSLQ96HA7 1378 aa19.49■□□□□ 0.71
LDHBP1-201ENST00000455730 VEGFAP15692 232 aaPredicted RBP19.49■□□□□ 0.71
LDHBP1-201ENST00000455730 RFC4P35249 363 aa19.49■□□□□ 0.71
LDHBP1-201ENST00000455730 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
LDHBP1-201ENST00000455730 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
LDHBP1-201ENST00000455730 FYB1O15117 783 aa19.48■□□□□ 0.71
LDHBP1-201ENST00000455730 CHRNA5P30532 468 aa19.48■□□□□ 0.71
LDHBP1-201ENST00000455730 RASSF7Q02833 373 aa19.47■□□□□ 0.71
LDHBP1-201ENST00000455730 SLC4A9Q96Q91 983 aa19.47■□□□□ 0.71
LDHBP1-201ENST00000455730 COL5A3P25940 1745 aaPredicted RBP19.47■□□□□ 0.71
LDHBP1-201ENST00000455730 NCAPD2Q15021 1401 aa19.46■□□□□ 0.71
LDHBP1-201ENST00000455730 GLTPD2A6NH11 291 aa19.46■□□□□ 0.71
LDHBP1-201ENST00000455730 RC3H1Q5TC82 1133 aaKnown RBP19.46■□□□□ 0.71
LDHBP1-201ENST00000455730 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
LDHBP1-201ENST00000455730 CNTNAP4Q9C0A0 1308 aa19.46■□□□□ 0.71
LDHBP1-201ENST00000455730 KIF24Q5T7B8 1368 aa19.45■□□□□ 0.7
LDHBP1-201ENST00000455730 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
LDHBP1-201ENST00000455730 RPS6KA4O75676 772 aa19.45■□□□□ 0.7
LDHBP1-201ENST00000455730 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
LDHBP1-201ENST00000455730 ZNF831Q5JPB2 1677 aa19.44■□□□□ 0.7
LDHBP1-201ENST00000455730 FOXN1O15353 648 aa19.44■□□□□ 0.7
LDHBP1-201ENST00000455730 DDR1Q08345 913 aa19.44■□□□□ 0.7
LDHBP1-201ENST00000455730 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
LDHBP1-201ENST00000455730 MKRN1Q9UHC7 482 aaKnown RBP19.44■□□□□ 0.7
LDHBP1-201ENST00000455730 PHKG2P15735 406 aa19.43■□□□□ 0.7
LDHBP1-201ENST00000455730 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
LDHBP1-201ENST00000455730 LMNB1P20700 586 aa19.42■□□□□ 0.7
LDHBP1-201ENST00000455730 FKBP8Q14318 412 aa19.42■□□□□ 0.7
LDHBP1-201ENST00000455730 PRDM10Q9NQV6 1147 aa19.42■□□□□ 0.7
LDHBP1-201ENST00000455730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.42■□□□□ 0.7
LDHBP1-201ENST00000455730 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
LDHBP1-201ENST00000455730 CCDC88AQ3V6T2 1871 aa19.41■□□□□ 0.7
LDHBP1-201ENST00000455730 TESK2Q96S53 571 aa19.41■□□□□ 0.7
LDHBP1-201ENST00000455730 TIAM2Q8IVF5 1701 aa19.41■□□□□ 0.7
LDHBP1-201ENST00000455730 KIF20BQ96Q89 1820 aa19.4■□□□□ 0.7
LDHBP1-201ENST00000455730 CREBZFQ9NS37 354 aa19.4■□□□□ 0.7
LDHBP1-201ENST00000455730 EMILIN1Q9Y6C2 1016 aa19.4■□□□□ 0.7
LDHBP1-201ENST00000455730 POTECB2RU33 542 aa19.39■□□□□ 0.69
LDHBP1-201ENST00000455730 FAM161AQ3B820 660 aa19.39■□□□□ 0.69
LDHBP1-201ENST00000455730 USP42Q9H9J4 1324 aaKnown RBP19.39■□□□□ 0.69
LDHBP1-201ENST00000455730 PCDH10Q9P2E7 1040 aa19.38■□□□□ 0.69
LDHBP1-201ENST00000455730 POLRMTO00411 1230 aaKnown RBP19.37■□□□□ 0.69
LDHBP1-201ENST00000455730 EYA1Q99502 592 aa19.37■□□□□ 0.69
LDHBP1-201ENST00000455730 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
LDHBP1-201ENST00000455730 CTCFP49711 727 aaPredicted RBP19.35■□□□□ 0.69
LDHBP1-201ENST00000455730 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
LDHBP1-201ENST00000455730 ST20-MTHFSA0A0A6YYL1 179 aa19.34■□□□□ 0.69
LDHBP1-201ENST00000455730 ERVV-2B6SEH9 535 aa19.34■□□□□ 0.69
LDHBP1-201ENST00000455730 CRKLP46109 303 aaKnown RBP19.34■□□□□ 0.69
LDHBP1-201ENST00000455730 AIDAQ96BJ3 306 aa19.34■□□□□ 0.69
LDHBP1-201ENST00000455730 TM4SF1P30408 202 aa19.33■□□□□ 0.68
LDHBP1-201ENST00000455730 CHADLQ6NUI6 762 aa19.33■□□□□ 0.68
LDHBP1-201ENST00000455730 AFDNP55196 1824 aaKnown RBP19.32■□□□□ 0.68
LDHBP1-201ENST00000455730 DLEC1Q9Y238 1755 aa19.32■□□□□ 0.68
LDHBP1-201ENST00000455730 ANKRD26Q9UPS8 1709 aa19.32■□□□□ 0.68
LDHBP1-201ENST00000455730 NFKBIEO00221 500 aa19.32■□□□□ 0.68
LDHBP1-201ENST00000455730 DPY19L2Q6NUT2 758 aa19.32■□□□□ 0.68
LDHBP1-201ENST00000455730 LBX1P52954 281 aa19.31■□□□□ 0.68
LDHBP1-201ENST00000455730 ABHD8Q96I13 439 aa19.31■□□□□ 0.68
LDHBP1-201ENST00000455730 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
LDHBP1-201ENST00000455730 PTCD1O75127 700 aaKnown RBP19.3■□□□□ 0.68
LDHBP1-201ENST00000455730 POTEIP0CG38 1075 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms