RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 MTFR1LQ9H019 292 aa15.97■□□□□ 0.15
TMEM56-202ENST00000455656 UBR2Q8IWV8 1755 aa15.96■□□□□ 0.15
TMEM56-202ENST00000455656 ITPK1Q13572 414 aa15.96■□□□□ 0.15
TMEM56-202ENST00000455656 AMIGO3Q86WK7 504 aa15.96■□□□□ 0.15
TMEM56-202ENST00000455656 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
TMEM56-202ENST00000455656 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
TMEM56-202ENST00000455656 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
TMEM56-202ENST00000455656 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
TMEM56-202ENST00000455656 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
TMEM56-202ENST00000455656 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
TMEM56-202ENST00000455656 TFCP2L1Q9NZI6 479 aa15.95■□□□□ 0.14
TMEM56-202ENST00000455656 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
TMEM56-202ENST00000455656 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
TMEM56-202ENST00000455656 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
TMEM56-202ENST00000455656 RNMTO43148 476 aaKnown RBP15.93■□□□□ 0.14
TMEM56-202ENST00000455656 CABP4P57796 275 aa15.93■□□□□ 0.14
TMEM56-202ENST00000455656 DDX10Q13206 875 aaKnown RBP15.93■□□□□ 0.14
TMEM56-202ENST00000455656 SLC16A10Q8TF71 515 aa15.93■□□□□ 0.14
TMEM56-202ENST00000455656 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
TMEM56-202ENST00000455656 DLG5Q8TDM6 1919 aa15.93■□□□□ 0.14
TMEM56-202ENST00000455656 KCPQ6ZWJ8 1503 aa15.93■□□□□ 0.14
TMEM56-202ENST00000455656 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
TMEM56-202ENST00000455656 PRKAR2BP31323 418 aa15.91■□□□□ 0.14
TMEM56-202ENST00000455656 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
TMEM56-202ENST00000455656 SMIM5Q71RC9 77 aa15.91■□□□□ 0.14
TMEM56-202ENST00000455656 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
TMEM56-202ENST00000455656 MAP3K5Q99683 1374 aa15.9■□□□□ 0.14
TMEM56-202ENST00000455656 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
TMEM56-202ENST00000455656 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
TMEM56-202ENST00000455656 PPP1R1BQ9UD71 204 aaPredicted RBP15.89■□□□□ 0.13
TMEM56-202ENST00000455656 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
TMEM56-202ENST00000455656 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
TMEM56-202ENST00000455656 AK7Q96M32 723 aa15.88■□□□□ 0.13
TMEM56-202ENST00000455656 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
TMEM56-202ENST00000455656 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
TMEM56-202ENST00000455656 FCHSD2O94868 740 aa15.87■□□□□ 0.13
TMEM56-202ENST00000455656 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
TMEM56-202ENST00000455656 HMGB2P26583 209 aaKnown RBP15.87■□□□□ 0.13
TMEM56-202ENST00000455656 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
TMEM56-202ENST00000455656 RALBP1Q15311 655 aa15.87■□□□□ 0.13
TMEM56-202ENST00000455656 CNTNAP4Q9C0A0 1308 aa15.87■□□□□ 0.13
TMEM56-202ENST00000455656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
TMEM56-202ENST00000455656 GNAT3A8MTJ3 354 aa15.86■□□□□ 0.13
TMEM56-202ENST00000455656 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
TMEM56-202ENST00000455656 SSFA2P28290 1259 aa15.86■□□□□ 0.13
TMEM56-202ENST00000455656 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
TMEM56-202ENST00000455656 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
TMEM56-202ENST00000455656 ARXQ96QS3 562 aa15.86■□□□□ 0.13
TMEM56-202ENST00000455656 FHDC1Q9C0D6 1143 aaPredicted RBP15.86■□□□□ 0.13
TMEM56-202ENST00000455656 RC3H1Q5TC82 1133 aaKnown RBP15.85■□□□□ 0.13
TMEM56-202ENST00000455656 PLEKHF1Q96S99 279 aa15.85■□□□□ 0.13
TMEM56-202ENST00000455656 GNPATO15228 680 aa15.84■□□□□ 0.13
TMEM56-202ENST00000455656 PHF14O94880 888 aa15.84■□□□□ 0.13
TMEM56-202ENST00000455656 MSL1Q68DK7 614 aa15.84■□□□□ 0.13
TMEM56-202ENST00000455656 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
TMEM56-202ENST00000455656 MSH5O43196 834 aa15.83■□□□□ 0.12
TMEM56-202ENST00000455656 MYBBP1AQ9BQG0 1328 aaKnown RBP15.83■□□□□ 0.12
TMEM56-202ENST00000455656 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
TMEM56-202ENST00000455656 DNAJC10Q8IXB1 793 aa15.82■□□□□ 0.12
TMEM56-202ENST00000455656 POLD1P28340 1107 aa15.81■□□□□ 0.12
TMEM56-202ENST00000455656 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
TMEM56-202ENST00000455656 INTS5Q6P9B9 1019 aaKnown RBP15.81■□□□□ 0.12
TMEM56-202ENST00000455656 KIF13BQ9NQT8 1826 aa15.81■□□□□ 0.12
TMEM56-202ENST00000455656 KDM3BQ7LBC6 1761 aa15.8■□□□□ 0.12
TMEM56-202ENST00000455656 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
TMEM56-202ENST00000455656 PRKRIP1Q9H875 184 aaPredicted RBP15.8■□□□□ 0.12
TMEM56-202ENST00000455656 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
TMEM56-202ENST00000455656 CYP19A1P11511 503 aaPredicted RBP15.79■□□□□ 0.12
TMEM56-202ENST00000455656 TEFQ10587 303 aa15.79■□□□□ 0.12
TMEM56-202ENST00000455656 DCTN1Q14203 1278 aa15.79■□□□□ 0.12
TMEM56-202ENST00000455656 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
TMEM56-202ENST00000455656 MCM10Q7L590 875 aa15.79■□□□□ 0.12
TMEM56-202ENST00000455656 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
TMEM56-202ENST00000455656 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
TMEM56-202ENST00000455656 KCNQ3O43525 872 aa15.78■□□□□ 0.12
TMEM56-202ENST00000455656 ADRA2BP18089 450 aa15.78■□□□□ 0.12
TMEM56-202ENST00000455656 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
TMEM56-202ENST00000455656 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
TMEM56-202ENST00000455656 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.12
TMEM56-202ENST00000455656 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
TMEM56-202ENST00000455656 NLGN2Q8NFZ4 835 aa15.77■□□□□ 0.12
TMEM56-202ENST00000455656 SOS1Q07889 1333 aaPredicted RBP15.76■□□□□ 0.11
TMEM56-202ENST00000455656 GYS1P13807 737 aa15.76■□□□□ 0.11
TMEM56-202ENST00000455656 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
TMEM56-202ENST00000455656 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
TMEM56-202ENST00000455656 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
TMEM56-202ENST00000455656 NFE2L2Q16236 605 aa15.75■□□□□ 0.11
TMEM56-202ENST00000455656 USP42Q9H9J4 1324 aaKnown RBP15.74■□□□□ 0.11
TMEM56-202ENST00000455656 SCN7AQ01118 1682 aa15.74■□□□□ 0.11
TMEM56-202ENST00000455656 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
TMEM56-202ENST00000455656 TTC5Q8N0Z6 440 aa15.74■□□□□ 0.11
TMEM56-202ENST00000455656 SRP68Q9UHB9 627 aaKnown RBP15.74■□□□□ 0.11
TMEM56-202ENST00000455656 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
TMEM56-202ENST00000455656 BCORQ6W2J9 1755 aa15.73■□□□□ 0.11
TMEM56-202ENST00000455656 CHD4Q14839 1912 aa15.73■□□□□ 0.11
TMEM56-202ENST00000455656 ZNF316A6NFI3 1004 aaPredicted RBP15.73■□□□□ 0.11
TMEM56-202ENST00000455656 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
TMEM56-202ENST00000455656 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
TMEM56-202ENST00000455656 COL15A1P39059 1388 aa15.73■□□□□ 0.11
TMEM56-202ENST00000455656 BRCA1P38398 1863 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms