RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 ATG3Q9NT62 314 aa24.16■■□□□ 1.46
CCDC144B-204ENST00000455629 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
CCDC144B-204ENST00000455629 GNPATO15228 680 aa24.15■■□□□ 1.46
CCDC144B-204ENST00000455629 HSP90AB1P08238 724 aaKnown RBP24.15■■□□□ 1.46
CCDC144B-204ENST00000455629 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
CCDC144B-204ENST00000455629 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
CCDC144B-204ENST00000455629 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
CCDC144B-204ENST00000455629 PLEKHO1Q53GL0 409 aaPredicted RBP24.13■■□□□ 1.45
CCDC144B-204ENST00000455629 DCAF5Q96JK2 942 aa24.13■■□□□ 1.45
CCDC144B-204ENST00000455629 KDRP35968 1356 aa24.12■■□□□ 1.45
CCDC144B-204ENST00000455629 AMOTQ4VCS5 1084 aa24.11■■□□□ 1.45
CCDC144B-204ENST00000455629 MORC1Q86VD1 984 aa24.1■■□□□ 1.45
CCDC144B-204ENST00000455629 ZNF530Q6P9A1 599 aaPredicted RBP24.08■■□□□ 1.45
CCDC144B-204ENST00000455629 RTCBQ9Y3I0 505 aaKnown RBP24.08■■□□□ 1.45
CCDC144B-204ENST00000455629 TRAPPC3LQ5T215 181 aa24.07■■□□□ 1.44
CCDC144B-204ENST00000455629 KDM6AO15550 1401 aaPredicted RBP24.07■■□□□ 1.44
CCDC144B-204ENST00000455629 ATP10DQ9P241 1426 aa24.07■■□□□ 1.44
CCDC144B-204ENST00000455629 ADRA2BP18089 450 aa24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 CABP4P57796 275 aa24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 SLC4A9Q96Q91 983 aa24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 KNSTRNQ9Y448 316 aa24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 COL5A3P25940 1745 aaPredicted RBP24.06■■□□□ 1.44
CCDC144B-204ENST00000455629 MMP10P09238 476 aa24.05■■□□□ 1.44
CCDC144B-204ENST00000455629 CNTNAP4Q9C0A0 1308 aa24.05■■□□□ 1.44
CCDC144B-204ENST00000455629 MTHFSP49914 203 aa24.04■■□□□ 1.44
CCDC144B-204ENST00000455629 C1orf141Q5JVX7 400 aa24.04■■□□□ 1.44
CCDC144B-204ENST00000455629 AEBP1Q8IUX7 1158 aa24.04■■□□□ 1.44
CCDC144B-204ENST00000455629 NLGN1Q8N2Q7 840 aa24.04■■□□□ 1.44
CCDC144B-204ENST00000455629 ADCY9O60503 1353 aa24.03■■□□□ 1.44
CCDC144B-204ENST00000455629 KIF13BQ9NQT8 1826 aa24.03■■□□□ 1.44
CCDC144B-204ENST00000455629 SULT6B1Q6IMI4 303 aa24.01■■□□□ 1.43
CCDC144B-204ENST00000455629 GPBP1L1Q9HC44 474 aaPredicted RBP24.01■■□□□ 1.43
CCDC144B-204ENST00000455629 RPS6KA4O75676 772 aa24■■□□□ 1.43
CCDC144B-204ENST00000455629 ARHGEF1Q92888 912 aaKnown RBP24■■□□□ 1.43
CCDC144B-204ENST00000455629 CICQ96RK0 1608 aaPredicted RBP23.99■■□□□ 1.43
CCDC144B-204ENST00000455629 IL13P35225 146 aa23.99■■□□□ 1.43
CCDC144B-204ENST00000455629 RFC4P35249 363 aa23.99■■□□□ 1.43
CCDC144B-204ENST00000455629 WWC3Q9ULE0 1092 aa23.99■■□□□ 1.43
CCDC144B-204ENST00000455629 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
CCDC144B-204ENST00000455629 TGFB2P61812 414 aa23.98■■□□□ 1.43
CCDC144B-204ENST00000455629 NFATC2IPQ8NCF5 419 aa23.98■■□□□ 1.43
CCDC144B-204ENST00000455629 PXDNLA1KZ92 1463 aa23.98■■□□□ 1.43
CCDC144B-204ENST00000455629 MYH14Q7Z406 1995 aaKnown RBP23.98■■□□□ 1.43
CCDC144B-204ENST00000455629 AMER1Q5JTC6 1135 aaPredicted RBP23.97■■□□□ 1.43
CCDC144B-204ENST00000455629 SCN11AQ9UI33 1791 aa23.96■■□□□ 1.43
CCDC144B-204ENST00000455629 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
CCDC144B-204ENST00000455629 KIAA1551Q9HCM1 1747 aa23.96■■□□□ 1.43
CCDC144B-204ENST00000455629 C10orf71Q711Q0 1435 aa23.96■■□□□ 1.43
CCDC144B-204ENST00000455629 PTCD1O75127 700 aaKnown RBP23.96■■□□□ 1.43
CCDC144B-204ENST00000455629 GYS1P13807 737 aa23.96■■□□□ 1.43
CCDC144B-204ENST00000455629 CCDC87Q9NVE4 849 aa23.95■■□□□ 1.42
CCDC144B-204ENST00000455629 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
CCDC144B-204ENST00000455629 CEP350Q5VT06 3117 aa23.93■■□□□ 1.42
CCDC144B-204ENST00000455629 CRKLP46109 303 aaKnown RBP23.93■■□□□ 1.42
CCDC144B-204ENST00000455629 AKAP4Q5JQC9 854 aa23.93■■□□□ 1.42
CCDC144B-204ENST00000455629 PARP3Q9Y6F1 533 aa23.93■■□□□ 1.42
CCDC144B-204ENST00000455629 KIF7Q2M1P5 1343 aa23.92■■□□□ 1.42
CCDC144B-204ENST00000455629 ZNF526Q8TF50 670 aaPredicted RBP23.92■■□□□ 1.42
CCDC144B-204ENST00000455629 TJP1Q07157 1748 aa23.92■■□□□ 1.42
CCDC144B-204ENST00000455629 A0A0G2JLW4 131 aa23.91■■□□□ 1.42
CCDC144B-204ENST00000455629 SLC52A2Q9HAB3 445 aa23.89■■□□□ 1.41
CCDC144B-204ENST00000455629 BCS1LQ9Y276 419 aa23.89■■□□□ 1.41
CCDC144B-204ENST00000455629 USP42Q9H9J4 1324 aaKnown RBP23.88■■□□□ 1.41
CCDC144B-204ENST00000455629 BRCA1P38398 1863 aaKnown RBP23.88■■□□□ 1.41
CCDC144B-204ENST00000455629 DPEP1P16444 411 aa23.88■■□□□ 1.41
CCDC144B-204ENST00000455629 MRC1P22897 1456 aa23.87■■□□□ 1.41
CCDC144B-204ENST00000455629 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
CCDC144B-204ENST00000455629 INTS5Q6P9B9 1019 aaKnown RBP23.86■■□□□ 1.41
CCDC144B-204ENST00000455629 VIRMAQ69YN4 1812 aaKnown RBP23.85■■□□□ 1.41
CCDC144B-204ENST00000455629 FKBP8Q14318 412 aa23.85■■□□□ 1.41
CCDC144B-204ENST00000455629 LGR6Q9HBX8 967 aa23.85■■□□□ 1.41
CCDC144B-204ENST00000455629 SRP68Q9UHB9 627 aaKnown RBP23.85■■□□□ 1.41
CCDC144B-204ENST00000455629 RNMTO43148 476 aaKnown RBP23.84■■□□□ 1.41
CCDC144B-204ENST00000455629 DIAPH1O60610 1272 aaKnown RBP23.84■■□□□ 1.41
CCDC144B-204ENST00000455629 FCHSD2O94868 740 aa23.84■■□□□ 1.41
CCDC144B-204ENST00000455629 HMOX1P09601 288 aa23.84■■□□□ 1.41
CCDC144B-204ENST00000455629 ARHGAP27Q6ZUM4 889 aa23.84■■□□□ 1.41
CCDC144B-204ENST00000455629 ADAMTS7Q9UKP4 1686 aa23.83■■□□□ 1.41
CCDC144B-204ENST00000455629 ARFGEF1Q9Y6D6 1849 aa23.83■■□□□ 1.41
CCDC144B-204ENST00000455629 HSPA6P17066 643 aa23.83■■□□□ 1.41
CCDC144B-204ENST00000455629 DNAJC10Q8IXB1 793 aa23.83■■□□□ 1.41
CCDC144B-204ENST00000455629 KCNA3P22001 575 aa23.82■■□□□ 1.4
CCDC144B-204ENST00000455629 DDR1Q08345 913 aa23.82■■□□□ 1.4
CCDC144B-204ENST00000455629 PIM2Q9P1W9 311 aa23.82■■□□□ 1.4
CCDC144B-204ENST00000455629 KIF3CO14782 793 aa23.81■■□□□ 1.4
CCDC144B-204ENST00000455629 ZPR1O75312 459 aa23.81■■□□□ 1.4
CCDC144B-204ENST00000455629 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
CCDC144B-204ENST00000455629 CC2D1BQ5T0F9 858 aaKnown RBP23.81■■□□□ 1.4
CCDC144B-204ENST00000455629 SOS1Q07889 1333 aaPredicted RBP23.81■■□□□ 1.4
CCDC144B-204ENST00000455629 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
CCDC144B-204ENST00000455629 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
CCDC144B-204ENST00000455629 TM4SF1P30408 202 aa23.79■■□□□ 1.4
CCDC144B-204ENST00000455629 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
CCDC144B-204ENST00000455629 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
CCDC144B-204ENST00000455629 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
CCDC144B-204ENST00000455629 POLRMTO00411 1230 aaKnown RBP23.78■■□□□ 1.4
CCDC144B-204ENST00000455629 DALRD3Q5D0E6 543 aaKnown RBP23.78■■□□□ 1.4
CCDC144B-204ENST00000455629 USPL1Q5W0Q7 1092 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms