RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 SCN11AQ9UI33 1791 aa27.53■■■□□ 2
CCHCR1-209ENST00000455279 ATP6V1AP38606 617 aa27.51■■□□□ 1.99
CCHCR1-209ENST00000455279 MTHFSDQ2M296 383 aaKnown RBP27.51■■□□□ 1.99
CCHCR1-209ENST00000455279 C1orf141Q5JVX7 400 aa27.51■■□□□ 1.99
CCHCR1-209ENST00000455279 SLC16A10Q8TF71 515 aa27.51■■□□□ 1.99
CCHCR1-209ENST00000455279 LGR6Q9HBX8 967 aa27.51■■□□□ 1.99
CCHCR1-209ENST00000455279 VIRMAQ69YN4 1812 aaKnown RBP27.51■■□□□ 1.99
CCHCR1-209ENST00000455279 PHF14O94880 888 aa27.5■■□□□ 1.99
CCHCR1-209ENST00000455279 HSP90AB1P08238 724 aaKnown RBP27.5■■□□□ 1.99
CCHCR1-209ENST00000455279 CABP4P57796 275 aa27.5■■□□□ 1.99
CCHCR1-209ENST00000455279 NFATC2IPQ8NCF5 419 aa27.49■■□□□ 1.99
CCHCR1-209ENST00000455279 U2SURPO15042 1029 aaKnown RBP27.48■■□□□ 1.99
CCHCR1-209ENST00000455279 AK7Q96M32 723 aa27.48■■□□□ 1.99
CCHCR1-209ENST00000455279 RBM42Q9BTD8 480 aaKnown RBP27.48■■□□□ 1.99
CCHCR1-209ENST00000455279 PPP2R1AP30153 589 aa27.47■■□□□ 1.99
CCHCR1-209ENST00000455279 AKAP4Q5JQC9 854 aa27.46■■□□□ 1.99
CCHCR1-209ENST00000455279 KLHL34Q8N239 644 aa27.46■■□□□ 1.99
CCHCR1-209ENST00000455279 COL5A3P25940 1745 aaPredicted RBP27.44■■□□□ 1.98
CCHCR1-209ENST00000455279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.44■■□□□ 1.98
CCHCR1-209ENST00000455279 RNMTO43148 476 aaKnown RBP27.44■■□□□ 1.98
CCHCR1-209ENST00000455279 MYH14Q7Z406 1995 aaKnown RBP27.44■■□□□ 1.98
CCHCR1-209ENST00000455279 GNPATO15228 680 aa27.43■■□□□ 1.98
CCHCR1-209ENST00000455279 PTCD1O75127 700 aaKnown RBP27.43■■□□□ 1.98
CCHCR1-209ENST00000455279 NLGN2Q8NFZ4 835 aa27.43■■□□□ 1.98
CCHCR1-209ENST00000455279 ADAMTS7Q9UKP4 1686 aa27.43■■□□□ 1.98
CCHCR1-209ENST00000455279 POLD1P28340 1107 aa27.42■■□□□ 1.98
CCHCR1-209ENST00000455279 TJP1Q07157 1748 aa27.41■■□□□ 1.98
CCHCR1-209ENST00000455279 MRC1P22897 1456 aa27.41■■□□□ 1.98
CCHCR1-209ENST00000455279 ZNF831Q5JPB2 1677 aa27.4■■□□□ 1.98
CCHCR1-209ENST00000455279 MAP3K5Q99683 1374 aa27.4■■□□□ 1.98
CCHCR1-209ENST00000455279 SLC39A6Q13433 755 aa27.4■■□□□ 1.98
CCHCR1-209ENST00000455279 SLC52A2Q9HAB3 445 aa27.4■■□□□ 1.98
CCHCR1-209ENST00000455279 PHACTR3Q96KR7 559 aa27.39■■□□□ 1.98
CCHCR1-209ENST00000455279 SSFA2P28290 1259 aa27.37■■□□□ 1.97
CCHCR1-209ENST00000455279 RSPH6AQ9H0K4 717 aa27.37■■□□□ 1.97
CCHCR1-209ENST00000455279 FLAD1Q8NFF5 587 aa27.36■■□□□ 1.97
CCHCR1-209ENST00000455279 PRKAR2BP31323 418 aa27.35■■□□□ 1.97
CCHCR1-209ENST00000455279 IL17REQ8NFR9 667 aa27.34■■□□□ 1.97
CCHCR1-209ENST00000455279 KCPQ6ZWJ8 1503 aa27.34■■□□□ 1.97
CCHCR1-209ENST00000455279 CFAP53Q96M91 514 aa27.33■■□□□ 1.97
CCHCR1-209ENST00000455279 CNTNAP4Q9C0A0 1308 aa27.33■■□□□ 1.97
CCHCR1-209ENST00000455279 DNAJC10Q8IXB1 793 aa27.32■■□□□ 1.96
CCHCR1-209ENST00000455279 CICQ96RK0 1608 aaPredicted RBP27.31■■□□□ 1.96
CCHCR1-209ENST00000455279 C4AP0C0L4 1744 aa27.31■■□□□ 1.96
CCHCR1-209ENST00000455279 CRKLP46109 303 aaKnown RBP27.31■■□□□ 1.96
CCHCR1-209ENST00000455279 ARHGEF1Q92888 912 aaKnown RBP27.31■■□□□ 1.96
CCHCR1-209ENST00000455279 U2AF1L5P0DN76 240 aaPredicted RBP27.3■■□□□ 1.96
CCHCR1-209ENST00000455279 U2AF1Q01081 240 aaKnown RBP eCLIP27.3■■□□□ 1.96
CCHCR1-209ENST00000455279 YY1P25490 414 aa27.29■■□□□ 1.96
CCHCR1-209ENST00000455279 RC3H1Q5TC82 1133 aaKnown RBP27.29■■□□□ 1.96
CCHCR1-209ENST00000455279 RTCBQ9Y3I0 505 aaKnown RBP27.29■■□□□ 1.96
CCHCR1-209ENST00000455279 SIPA1L3O60292 1781 aaPredicted RBP27.29■■□□□ 1.96
CCHCR1-209ENST00000455279 RPS6KA4O75676 772 aa27.28■■□□□ 1.96
CCHCR1-209ENST00000455279 UBR2Q8IWV8 1755 aa27.27■■□□□ 1.96
CCHCR1-209ENST00000455279 DDX10Q13206 875 aaKnown RBP27.27■■□□□ 1.96
CCHCR1-209ENST00000455279 TRAPPC3LQ5T215 181 aa27.27■■□□□ 1.96
CCHCR1-209ENST00000455279 INTS5Q6P9B9 1019 aaKnown RBP27.27■■□□□ 1.96
CCHCR1-209ENST00000455279 GAS2L2Q8NHY3 880 aa27.27■■□□□ 1.96
CCHCR1-209ENST00000455279 UTRNP46939 3433 aa27.26■■□□□ 1.96
CCHCR1-209ENST00000455279 GNAT3A8MTJ3 354 aa27.26■■□□□ 1.95
CCHCR1-209ENST00000455279 HMGB2P26583 209 aaKnown RBP27.26■■□□□ 1.95
CCHCR1-209ENST00000455279 PELP1Q8IZL8 1130 aaKnown RBP27.26■■□□□ 1.95
CCHCR1-209ENST00000455279 SRP68Q9UHB9 627 aaKnown RBP27.26■■□□□ 1.95
CCHCR1-209ENST00000455279 DCAF8L1A6NGE4 600 aa27.25■■□□□ 1.95
CCHCR1-209ENST00000455279 YBX3P16989 372 aaKnown RBP eCLIP27.25■■□□□ 1.95
CCHCR1-209ENST00000455279 KCNQ3O43525 872 aa27.24■■□□□ 1.95
CCHCR1-209ENST00000455279 NUDCQ9Y266 331 aa27.24■■□□□ 1.95
CCHCR1-209ENST00000455279 GYS1P13807 737 aa27.23■■□□□ 1.95
CCHCR1-209ENST00000455279 GPR162Q16538 588 aa27.23■■□□□ 1.95
CCHCR1-209ENST00000455279 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
CCHCR1-209ENST00000455279 MMP10P09238 476 aa27.22■■□□□ 1.95
CCHCR1-209ENST00000455279 CYP19A1P11511 503 aaPredicted RBP27.22■■□□□ 1.95
CCHCR1-209ENST00000455279 CEMIPQ8WUJ3 1361 aa27.22■■□□□ 1.95
CCHCR1-209ENST00000455279 DCTN1Q14203 1278 aa27.21■■□□□ 1.95
CCHCR1-209ENST00000455279 MCM10Q7L590 875 aa27.2■■□□□ 1.94
CCHCR1-209ENST00000455279 ZBTB1Q9Y2K1 713 aa27.2■■□□□ 1.94
CCHCR1-209ENST00000455279 FCHSD2O94868 740 aa27.19■■□□□ 1.94
CCHCR1-209ENST00000455279 ZNF496Q96IT1 587 aaPredicted RBP27.19■■□□□ 1.94
CCHCR1-209ENST00000455279 CCDC87Q9NVE4 849 aa27.19■■□□□ 1.94
CCHCR1-209ENST00000455279 CD2APQ9Y5K6 639 aa27.19■■□□□ 1.94
CCHCR1-209ENST00000455279 ADRA2BP18089 450 aa27.18■■□□□ 1.94
CCHCR1-209ENST00000455279 RFC4P35249 363 aa27.18■■□□□ 1.94
CCHCR1-209ENST00000455279 TEFQ10587 303 aa27.18■■□□□ 1.94
CCHCR1-209ENST00000455279 KIAA1551Q9HCM1 1747 aa27.17■■□□□ 1.94
CCHCR1-209ENST00000455279 SOS1Q07889 1333 aaPredicted RBP27.16■■□□□ 1.94
CCHCR1-209ENST00000455279 CHD4Q14839 1912 aa27.16■■□□□ 1.94
CCHCR1-209ENST00000455279 FKBP8Q14318 412 aa27.16■■□□□ 1.94
CCHCR1-209ENST00000455279 ZNF790Q6PG37 636 aa27.16■■□□□ 1.94
CCHCR1-209ENST00000455279 USP42Q9H9J4 1324 aaKnown RBP27.16■■□□□ 1.94
CCHCR1-209ENST00000455279 GOLGB1Q14789 3259 aaKnown RBP27.15■■□□□ 1.94
CCHCR1-209ENST00000455279 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
CCHCR1-209ENST00000455279 PLEKHF1Q96S99 279 aa27.14■■□□□ 1.94
CCHCR1-209ENST00000455279 HEG1Q9ULI3 1381 aa27.13■■□□□ 1.93
CCHCR1-209ENST00000455279 PRAMEF22A3QJZ6 481 aa27.13■■□□□ 1.93
CCHCR1-209ENST00000455279 DDR1Q08345 913 aa27.13■■□□□ 1.93
CCHCR1-209ENST00000455279 TTC5Q8N0Z6 440 aa27.13■■□□□ 1.93
CCHCR1-209ENST00000455279 N4BP2Q86UW6 1770 aaPredicted RBP27.12■■□□□ 1.93
CCHCR1-209ENST00000455279 KIF13BQ9NQT8 1826 aa27.12■■□□□ 1.93
CCHCR1-209ENST00000455279 NLGN1Q8N2Q7 840 aa27.12■■□□□ 1.93
CCHCR1-209ENST00000455279 CANXP27824 592 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms