RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 CHMP7Q8WUX9 453 aaPredicted RBP8.69□□□□□ -1.02
CDH19-202ENST00000454642 SCG3Q8WXD2 468 aaKnown RBP8.69□□□□□ -1.02
CDH19-202ENST00000454642 OSBPL3Q9H4L5 887 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 TLL2Q9Y6L7 1015 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 GFRA3O60609 400 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 SCNN1DP51172 638 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 WNT7BP56706 349 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDH19-202ENST00000454642 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 GGCXP38435 758 aa8.68□□□□□ -1.02
CDH19-202ENST00000454642 NPAS4Q8IUM7 802 aa8.68□□□□□ -1.02
CDH19-202ENST00000454642 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
CDH19-202ENST00000454642 KIAA1522Q9P206 1035 aaPredicted RBP8.68□□□□□ -1.02
CDH19-202ENST00000454642 NRG2O14511 850 aaPredicted RBP8.67□□□□□ -1.02
CDH19-202ENST00000454642 ECM1Q16610 540 aa8.67□□□□□ -1.02
CDH19-202ENST00000454642 IGSF3O75054 1194 aa8.66□□□□□ -1.02
CDH19-202ENST00000454642 PTCD1O75127 700 aaKnown RBP8.66□□□□□ -1.02
CDH19-202ENST00000454642 GRM5P41594 1212 aa8.66□□□□□ -1.02
CDH19-202ENST00000454642 TBCELQ5QJ74 424 aa8.66□□□□□ -1.02
CDH19-202ENST00000454642 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
CDH19-202ENST00000454642 TSPAN10Q9H1Z9 355 aaPredicted RBP8.66□□□□□ -1.02
CDH19-202ENST00000454642 ARHGAP4P98171 946 aa8.65□□□□□ -1.02
CDH19-202ENST00000454642 ETNK1Q9HBU6 452 aa8.65□□□□□ -1.02
CDH19-202ENST00000454642 BACH1O14867 736 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 INHAP05111 366 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 IGFBP4P22692 258 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.03
CDH19-202ENST00000454642 SF3B2Q13435 895 aaKnown RBP8.65□□□□□ -1.03
CDH19-202ENST00000454642 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 RAB6BQ9NRW1 208 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 DCTN4Q9UJW0 460 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.03
CDH19-202ENST00000454642 CDK15Q96Q40 435 aa8.64□□□□□ -1.03
CDH19-202ENST00000454642 FOXO3O43524 673 aa8.63□□□□□ -1.03
CDH19-202ENST00000454642 CD2BP2O95400 341 aaKnown RBP8.63□□□□□ -1.03
CDH19-202ENST00000454642 HELQQ8TDG4 1101 aa8.63□□□□□ -1.03
CDH19-202ENST00000454642 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
CDH19-202ENST00000454642 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
CDH19-202ENST00000454642 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 SAP130Q9H0E3 1048 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 A0A1W2PRU2 124 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
CDH19-202ENST00000454642 LILRA1O75019 489 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 RPIAP49247 311 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 EPHA4P54764 986 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 MYT1Q01538 1121 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
CDH19-202ENST00000454642 ASB16Q96NS5 453 aa8.62□□□□□ -1.03
CDH19-202ENST00000454642 DCAF1Q9Y4B6 1507 aa8.61□□□□□ -1.03
CDH19-202ENST00000454642 MPSTP25325 297 aa8.61□□□□□ -1.03
CDH19-202ENST00000454642 CYP2U1Q7Z449 544 aa8.61□□□□□ -1.03
CDH19-202ENST00000454642 ZSCAN29Q8IWY8 852 aaPredicted RBP8.61□□□□□ -1.03
CDH19-202ENST00000454642 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
CDH19-202ENST00000454642 WASLO00401 505 aaPredicted RBP8.6□□□□□ -1.03
CDH19-202ENST00000454642 ADH1CP00326 375 aa8.6□□□□□ -1.03
CDH19-202ENST00000454642 NR3C2P08235 984 aa8.6□□□□□ -1.03
CDH19-202ENST00000454642 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
CDH19-202ENST00000454642 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
CDH19-202ENST00000454642 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
CDH19-202ENST00000454642 FAM13AO94988 1023 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 SLC9A9Q8IVB4 645 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 PDZRN3Q9UPQ7 1066 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 GNRH1P01148 92 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 AAMPQ13685 434 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 C16orf46Q6P387 395 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 FBXO33Q7Z6M2 555 aa8.59□□□□□ -1.03
CDH19-202ENST00000454642 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
CDH19-202ENST00000454642 A6NJY4 79 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 SIAH2O43255 324 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 ESCO1Q5FWF5 840 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 TMC1Q8TDI8 760 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 MRGPRX2Q96LB1 330 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
CDH19-202ENST00000454642 SMTNP53814 917 aa8.57□□□□□ -1.04
CDH19-202ENST00000454642 TRIM67Q6ZTA4 783 aa8.57□□□□□ -1.04
CDH19-202ENST00000454642 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
CDH19-202ENST00000454642 SLC19A1P41440 591 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 FOXK2Q01167 660 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 NR5A1Q13285 461 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 COX20Q5RI15 118 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
CDH19-202ENST00000454642 USP3Q9Y6I4 520 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 CC2D2AQ9P2K1 1620 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 IL2RAP01589 272 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 EAPPQ56P03 285 aaPredicted RBP8.56□□□□□ -1.04
CDH19-202ENST00000454642 TMC7Q7Z402 723 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDH19-202ENST00000454642 USP35Q9P2H5 1018 aa8.56□□□□□ -1.04
CDH19-202ENST00000454642 LOC105371045A0A1W2PR82 267 aa8.55□□□□□ -1.04
CDH19-202ENST00000454642 NDUFB5O43674 189 aa8.55□□□□□ -1.04
CDH19-202ENST00000454642 NPR3P17342 541 aa8.55□□□□□ -1.04
CDH19-202ENST00000454642 TLR1Q15399 786 aa8.55□□□□□ -1.04
CDH19-202ENST00000454642 CNKSR1Q969H4 720 aa8.55□□□□□ -1.04
CDH19-202ENST00000454642 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
CDH19-202ENST00000454642 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms