RNA–Protein interactions for RNA: ENST00000454540.5

BBX-216, Transcript of BBX, HMG-box containing, humanhuman

TSL 5

Gene BBX, Length 392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-216ENST00000454540 EMILIN1Q9Y6C2 1016 aa28.47■■■□□ 2.15
BBX-216ENST00000454540 DPEP1P16444 411 aa28.46■■■□□ 2.15
BBX-216ENST00000454540 RBM46Q8TBY0 533 aaKnown RBP28.46■■■□□ 2.15
BBX-216ENST00000454540 TONSLQ96HA7 1378 aa28.46■■■□□ 2.15
BBX-216ENST00000454540 C10orf71Q711Q0 1435 aa28.45■■■□□ 2.15
BBX-216ENST00000454540 TMF1P82094 1093 aa28.45■■■□□ 2.14
BBX-216ENST00000454540 HTRA3P83110 453 aa28.45■■■□□ 2.14
BBX-216ENST00000454540 NLGN1Q8N2Q7 840 aa28.45■■■□□ 2.14
BBX-216ENST00000454540 ATG3Q9NT62 314 aa28.45■■■□□ 2.14
BBX-216ENST00000454540 FCHSD2O94868 740 aa28.44■■■□□ 2.14
BBX-216ENST00000454540 TRAPPC3LQ5T215 181 aa28.44■■■□□ 2.14
BBX-216ENST00000454540 COL13A1Q5TAT6 717 aaPredicted RBP28.44■■■□□ 2.14
BBX-216ENST00000454540 KLRG1Q96E93 195 aa28.43■■■□□ 2.14
BBX-216ENST00000454540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.43■■■□□ 2.142e-8■■□□□ 13
BBX-216ENST00000454540 RTCBQ9Y3I0 505 aaKnown RBP28.43■■■□□ 2.14
BBX-216ENST00000454540 WDR90Q96KV7 1748 aa28.43■■■□□ 2.14
BBX-216ENST00000454540 C9orf131Q5VYM1 1079 aa28.42■■■□□ 2.14
BBX-216ENST00000454540 PHKG2P15735 406 aa28.41■■■□□ 2.14
BBX-216ENST00000454540 JMYQ8N9B5 988 aa28.41■■■□□ 2.14
BBX-216ENST00000454540 CCDC87Q9NVE4 849 aa28.41■■■□□ 2.14
BBX-216ENST00000454540 ARHGEF1Q92888 912 aaKnown RBP28.4■■■□□ 2.14
BBX-216ENST00000454540 EYA1Q99502 592 aa28.4■■■□□ 2.14
BBX-216ENST00000454540 KIF20BQ96Q89 1820 aa28.39■■■□□ 2.14
BBX-216ENST00000454540 PPM1GO15355 546 aaPredicted RBP28.39■■■□□ 2.14
BBX-216ENST00000454540 C16orf71Q8IYS4 520 aaPredicted RBP28.39■■■□□ 2.14
BBX-216ENST00000454540 IFNL2Q8IZJ0 200 aa28.39■■■□□ 2.14
BBX-216ENST00000454540 SLC4A9Q96Q91 983 aa28.39■■■□□ 2.14
BBX-216ENST00000454540 KCNA3P22001 575 aa28.38■■■□□ 2.13
BBX-216ENST00000454540 KDRP35968 1356 aa28.37■■■□□ 2.13
BBX-216ENST00000454540 GYS1P13807 737 aa28.37■■■□□ 2.13
BBX-216ENST00000454540 FSTL1Q12841 308 aa28.37■■■□□ 2.13
BBX-216ENST00000454540 CARD14Q9BXL6 1004 aa28.37■■■□□ 2.13
BBX-216ENST00000454540 PARP3Q9Y6F1 533 aa28.36■■■□□ 2.13
BBX-216ENST00000454540 C4AP0C0L4 1744 aa28.35■■■□□ 2.13
BBX-216ENST00000454540 ADRA2BP18089 450 aa28.35■■■□□ 2.13
BBX-216ENST00000454540 RC3H1Q5TC82 1133 aaKnown RBP28.35■■■□□ 2.13
BBX-216ENST00000454540 WASHC2AQ641Q2 1341 aa28.35■■■□□ 2.13
BBX-216ENST00000454540 PLEKHG2Q9H7P9 1386 aa28.35■■■□□ 2.13
BBX-216ENST00000454540 RBM42Q9BTD8 480 aaKnown RBP28.34■■■□□ 2.13
BBX-216ENST00000454540 BRCA1P38398 1863 aaKnown RBP28.34■■■□□ 2.13
BBX-216ENST00000454540 RPS6KA4O75676 772 aa28.33■■■□□ 2.13
BBX-216ENST00000454540 CAPN15O75808 1086 aa28.33■■■□□ 2.13
BBX-216ENST00000454540 RFC4P35249 363 aa28.33■■■□□ 2.13
BBX-216ENST00000454540 KCPQ6ZWJ8 1503 aa28.33■■■□□ 2.13
BBX-216ENST00000454540 PIM2Q9P1W9 311 aa28.32■■■□□ 2.12
BBX-216ENST00000454540 DCAF5Q96JK2 942 aa28.31■■■□□ 2.12
BBX-216ENST00000454540 RRAGCQ9HB90 399 aa28.31■■■□□ 2.12
BBX-216ENST00000454540 KDM2BQ8NHM5 1336 aa28.31■■■□□ 2.12
BBX-216ENST00000454540 CNTNAP4Q9C0A0 1308 aa28.31■■■□□ 2.12
BBX-216ENST00000454540 RNF181Q9P0P0 153 aa28.29■■■□□ 2.12
BBX-216ENST00000454540 ARFGEF1Q9Y6D6 1849 aa28.29■■■□□ 2.12
BBX-216ENST00000454540 DALRD3Q5D0E6 543 aaKnown RBP28.28■■■□□ 2.12
BBX-216ENST00000454540 TNS4Q8IZW8 715 aa28.28■■■□□ 2.12
BBX-216ENST00000454540 ANKRD26Q9UPS8 1709 aa28.27■■■□□ 2.12
BBX-216ENST00000454540 ZNF831Q5JPB2 1677 aa28.27■■■□□ 2.12
BBX-216ENST00000454540 ERVV-2B6SEH9 535 aa28.27■■■□□ 2.12
BBX-216ENST00000454540 CDCA8Q53HL2 280 aa28.26■■■□□ 2.11
BBX-216ENST00000454540 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
BBX-216ENST00000454540 COL5A3P25940 1745 aaPredicted RBP28.24■■■□□ 2.11
BBX-216ENST00000454540 PRELPP51888 382 aa28.24■■■□□ 2.11
BBX-216ENST00000454540 DDR1Q08345 913 aa28.23■■■□□ 2.11
BBX-216ENST00000454540 SRP68Q9UHB9 627 aaKnown RBP28.23■■■□□ 2.11
BBX-216ENST00000454540 MYH14Q7Z406 1995 aaKnown RBP28.22■■■□□ 2.11
BBX-216ENST00000454540 CHRNA5P30532 468 aa28.22■■■□□ 2.11
BBX-216ENST00000454540 EIF4A2Q14240 407 aaKnown RBP28.22■■■□□ 2.11
BBX-216ENST00000454540 FKBP8Q14318 412 aa28.22■■■□□ 2.11
BBX-216ENST00000454540 SMC1BQ8NDV3 1235 aa28.22■■■□□ 2.11
BBX-216ENST00000454540 HSP90AB1P08238 724 aaKnown RBP28.19■■■□□ 2.1
BBX-216ENST00000454540 CRKLP46109 303 aaKnown RBP28.19■■■□□ 2.1
BBX-216ENST00000454540 CABP4P57796 275 aa28.18■■■□□ 2.1
BBX-216ENST00000454540 USP42Q9H9J4 1324 aaKnown RBP28.18■■■□□ 2.1
BBX-216ENST00000454540 SBF1O95248 1867 aa28.17■■■□□ 2.1
BBX-216ENST00000454540 TNRC6CQ9HCJ0 1690 aaKnown RBP28.17■■■□□ 2.1
BBX-216ENST00000454540 PTCD1O75127 700 aaKnown RBP28.17■■■□□ 2.1
BBX-216ENST00000454540 KDM6AO15550 1401 aaPredicted RBP28.17■■■□□ 2.1
BBX-216ENST00000454540 POLRMTO00411 1230 aaKnown RBP28.14■■■□□ 2.1
BBX-216ENST00000454540 RASSF7Q02833 373 aa28.14■■■□□ 2.1
BBX-216ENST00000454540 PLEKHO1Q53GL0 409 aaPredicted RBP28.14■■■□□ 2.1
BBX-216ENST00000454540 ZNF530Q6P9A1 599 aaPredicted RBP28.14■■■□□ 2.1
BBX-216ENST00000454540 HSPA1AP0DMV8 641 aaKnown RBP28.13■■■□□ 2.09
BBX-216ENST00000454540 HSPA1BP0DMV9 641 aaKnown RBP28.13■■■□□ 2.09
BBX-216ENST00000454540 TM4SF1P30408 202 aa28.13■■■□□ 2.09
BBX-216ENST00000454540 TNNT2P45379 298 aaPredicted RBP28.12■■■□□ 2.09
BBX-216ENST00000454540 ZC3H4Q9UPT8 1303 aaKnown RBP28.11■■■□□ 2.09
BBX-216ENST00000454540 VEGFAP15692 232 aaPredicted RBP28.1■■■□□ 2.09
BBX-216ENST00000454540 INTS5Q6P9B9 1019 aaKnown RBP28.1■■■□□ 2.09
BBX-216ENST00000454540 GLTPD2A6NH11 291 aa28.09■■■□□ 2.09
BBX-216ENST00000454540 MTHFSP49914 203 aa28.09■■■□□ 2.09
BBX-216ENST00000454540 AMOTQ4VCS5 1084 aa28.09■■■□□ 2.09
BBX-216ENST00000454540 NFATC2IPQ8NCF5 419 aa28.09■■■□□ 2.09
BBX-216ENST00000454540 LMNB1P20700 586 aa28.07■■■□□ 2.08
BBX-216ENST00000454540 USPL1Q5W0Q7 1092 aa28.05■■■□□ 2.08
BBX-216ENST00000454540 ADAMTS7Q9UKP4 1686 aa28.05■■■□□ 2.08
BBX-216ENST00000454540 TJP1Q07157 1748 aa28.04■■■□□ 2.08
BBX-216ENST00000454540 ZPR1O75312 459 aa28.04■■■□□ 2.08
BBX-216ENST00000454540 C1orf141Q5JVX7 400 aa28.03■■■□□ 2.08
BBX-216ENST00000454540 NFIXQ14938 502 aa28.02■■■□□ 2.08
BBX-216ENST00000454540 AEBP1Q8IUX7 1158 aa28.02■■■□□ 2.08
BBX-216ENST00000454540 DNAJC10Q8IXB1 793 aa28.01■■■□□ 2.07
BBX-216ENST00000454540 SOS1Q07889 1333 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms