RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 UTRNP46939 3433 aa16.18■□□□□ 0.18
LINC01287-203ENST00000454441 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
LINC01287-203ENST00000454441 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
LINC01287-203ENST00000454441 IL13P35225 146 aa16.17■□□□□ 0.18
LINC01287-203ENST00000454441 SIK1P57059 783 aa16.17■□□□□ 0.18
LINC01287-203ENST00000454441 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
LINC01287-203ENST00000454441 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
LINC01287-203ENST00000454441 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
LINC01287-203ENST00000454441 CHD4Q14839 1912 aa16.16■□□□□ 0.18
LINC01287-203ENST00000454441 MTHFSP49914 203 aa16.16■□□□□ 0.18
LINC01287-203ENST00000454441 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
LINC01287-203ENST00000454441 DCAF5Q96JK2 942 aa16.16■□□□□ 0.18
LINC01287-203ENST00000454441 KDRP35968 1356 aa16.15■□□□□ 0.18
LINC01287-203ENST00000454441 ERVV-2B6SEH9 535 aa16.15■□□□□ 0.18
LINC01287-203ENST00000454441 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
LINC01287-203ENST00000454441 C1orf141Q5JVX7 400 aa16.15■□□□□ 0.18
LINC01287-203ENST00000454441 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
LINC01287-203ENST00000454441 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
LINC01287-203ENST00000454441 SCN11AQ9UI33 1791 aa16.15■□□□□ 0.18
LINC01287-203ENST00000454441 PHF14O94880 888 aa16.14■□□□□ 0.17
LINC01287-203ENST00000454441 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
LINC01287-203ENST00000454441 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
LINC01287-203ENST00000454441 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
LINC01287-203ENST00000454441 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.17
LINC01287-203ENST00000454441 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
LINC01287-203ENST00000454441 CABP4P57796 275 aa16.12■□□□□ 0.17
LINC01287-203ENST00000454441 ITPK1Q13572 414 aa16.12■□□□□ 0.17
LINC01287-203ENST00000454441 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
LINC01287-203ENST00000454441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
LINC01287-203ENST00000454441 SSFA2P28290 1259 aa16.11■□□□□ 0.17
LINC01287-203ENST00000454441 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
LINC01287-203ENST00000454441 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
LINC01287-203ENST00000454441 GNPATO15228 680 aa16.1■□□□□ 0.17
LINC01287-203ENST00000454441 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
LINC01287-203ENST00000454441 HMOX1P09601 288 aa16.1■□□□□ 0.17
LINC01287-203ENST00000454441 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
LINC01287-203ENST00000454441 GPR162Q16538 588 aa16.09■□□□□ 0.17
LINC01287-203ENST00000454441 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
LINC01287-203ENST00000454441 NLGN2Q8NFZ4 835 aa16.09■□□□□ 0.17
LINC01287-203ENST00000454441 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
LINC01287-203ENST00000454441 GOLGB1Q14789 3259 aaKnown RBP16.08■□□□□ 0.16
LINC01287-203ENST00000454441 NFATC2IPQ8NCF5 419 aa16.07■□□□□ 0.16
LINC01287-203ENST00000454441 SLC4A9Q96Q91 983 aa16.07■□□□□ 0.16
LINC01287-203ENST00000454441 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
LINC01287-203ENST00000454441 MYH14Q7Z406 1995 aaKnown RBP16.07■□□□□ 0.16
LINC01287-203ENST00000454441 TJP1Q07157 1748 aa16.06■□□□□ 0.16
LINC01287-203ENST00000454441 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
LINC01287-203ENST00000454441 RTCBQ9Y3I0 505 aaKnown RBP16.05■□□□□ 0.16
LINC01287-203ENST00000454441 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
LINC01287-203ENST00000454441 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
LINC01287-203ENST00000454441 MRC1P22897 1456 aa16.04■□□□□ 0.16
LINC01287-203ENST00000454441 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
LINC01287-203ENST00000454441 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
LINC01287-203ENST00000454441 ADAMTS7Q9UKP4 1686 aa16.04■□□□□ 0.16
LINC01287-203ENST00000454441 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
LINC01287-203ENST00000454441 TRAPPC3LQ5T215 181 aa16.03■□□□□ 0.16
LINC01287-203ENST00000454441 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
LINC01287-203ENST00000454441 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
LINC01287-203ENST00000454441 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
LINC01287-203ENST00000454441 CD2APQ9Y5K6 639 aa16.03■□□□□ 0.16
LINC01287-203ENST00000454441 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
LINC01287-203ENST00000454441 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
LINC01287-203ENST00000454441 RPS6KA4O75676 772 aa16■□□□□ 0.15
LINC01287-203ENST00000454441 YBX3P16989 372 aaKnown RBP eCLIP16■□□□□ 0.151e-11■□□□□ 9.6
LINC01287-203ENST00000454441 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
LINC01287-203ENST00000454441 KIF13BQ9NQT8 1826 aa15.99■□□□□ 0.15
LINC01287-203ENST00000454441 MMP10P09238 476 aa15.99■□□□□ 0.15
LINC01287-203ENST00000454441 RFC4P35249 363 aa15.99■□□□□ 0.15
LINC01287-203ENST00000454441 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
LINC01287-203ENST00000454441 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
LINC01287-203ENST00000454441 UBR2Q8IWV8 1755 aa15.99■□□□□ 0.15
LINC01287-203ENST00000454441 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
LINC01287-203ENST00000454441 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
LINC01287-203ENST00000454441 GAS2L2Q8NHY3 880 aa15.98■□□□□ 0.15
LINC01287-203ENST00000454441 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
LINC01287-203ENST00000454441 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
LINC01287-203ENST00000454441 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
LINC01287-203ENST00000454441 N4BP2Q86UW6 1770 aaPredicted RBP15.97■□□□□ 0.15
LINC01287-203ENST00000454441 GYS1P13807 737 aa15.96■□□□□ 0.15
LINC01287-203ENST00000454441 PPP2R1AP30153 589 aa15.96■□□□□ 0.15
LINC01287-203ENST00000454441 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
LINC01287-203ENST00000454441 NUDCQ9Y266 331 aa15.96■□□□□ 0.15
LINC01287-203ENST00000454441 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
LINC01287-203ENST00000454441 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
LINC01287-203ENST00000454441 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
LINC01287-203ENST00000454441 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
LINC01287-203ENST00000454441 TEFQ10587 303 aa15.94■□□□□ 0.14
LINC01287-203ENST00000454441 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
LINC01287-203ENST00000454441 TTC5Q8N0Z6 440 aa15.94■□□□□ 0.14
LINC01287-203ENST00000454441 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
LINC01287-203ENST00000454441 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
LINC01287-203ENST00000454441 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
LINC01287-203ENST00000454441 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC01287-203ENST00000454441 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
LINC01287-203ENST00000454441 SRP68Q9UHB9 627 aaKnown RBP15.93■□□□□ 0.14
LINC01287-203ENST00000454441 PARP3Q9Y6F1 533 aa15.93■□□□□ 0.14
LINC01287-203ENST00000454441 CYP19A1P11511 503 aaPredicted RBP15.92■□□□□ 0.14
LINC01287-203ENST00000454441 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
LINC01287-203ENST00000454441 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
LINC01287-203ENST00000454441 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms