RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SYT17Q9BSW7 474 aa14.39□□□□□ -0.11
DDX39A-203ENST00000454233 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
DDX39A-203ENST00000454233 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
DDX39A-203ENST00000454233 U2SURPO15042 1029 aaKnown RBP14.38□□□□□ -0.11
DDX39A-203ENST00000454233 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
DDX39A-203ENST00000454233 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
DDX39A-203ENST00000454233 PHF14O94880 888 aa14.36□□□□□ -0.11
DDX39A-203ENST00000454233 ITPK1Q13572 414 aa14.36□□□□□ -0.11
DDX39A-203ENST00000454233 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
DDX39A-203ENST00000454233 NFATC2IPQ8NCF5 419 aa14.36□□□□□ -0.11
DDX39A-203ENST00000454233 COL3A1P02461 1466 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-203ENST00000454233 MAP3K5Q99683 1374 aa14.35□□□□□ -0.11
DDX39A-203ENST00000454233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.35□□□□□ -0.11
DDX39A-203ENST00000454233 GNPATO15228 680 aa14.35□□□□□ -0.11
DDX39A-203ENST00000454233 SSFA2P28290 1259 aa14.35□□□□□ -0.11
DDX39A-203ENST00000454233 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
DDX39A-203ENST00000454233 MTHFSDQ2M296 383 aaKnown RBP14.34□□□□□ -0.11
DDX39A-203ENST00000454233 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
DDX39A-203ENST00000454233 COL24A1Q17RW2 1714 aa14.34□□□□□ -0.11
DDX39A-203ENST00000454233 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
DDX39A-203ENST00000454233 RNMTO43148 476 aaKnown RBP14.33□□□□□ -0.12
DDX39A-203ENST00000454233 PTCD1O75127 700 aaKnown RBP14.33□□□□□ -0.12
DDX39A-203ENST00000454233 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
DDX39A-203ENST00000454233 UBR3Q6ZT12 1888 aa14.33□□□□□ -0.12
DDX39A-203ENST00000454233 AMIGO3Q86WK7 504 aa14.32□□□□□ -0.12
DDX39A-203ENST00000454233 GAS2L2Q8NHY3 880 aa14.32□□□□□ -0.12
DDX39A-203ENST00000454233 SLC4A9Q96Q91 983 aa14.32□□□□□ -0.12
DDX39A-203ENST00000454233 SLC52A2Q9HAB3 445 aa14.32□□□□□ -0.12
DDX39A-203ENST00000454233 LGR6Q9HBX8 967 aa14.32□□□□□ -0.12
DDX39A-203ENST00000454233 RTCBQ9Y3I0 505 aaKnown RBP14.32□□□□□ -0.12
DDX39A-203ENST00000454233 ZNF831Q5JPB2 1677 aa14.32□□□□□ -0.12
DDX39A-203ENST00000454233 RC3H1Q5TC82 1133 aaKnown RBP14.31□□□□□ -0.12
DDX39A-203ENST00000454233 SMIM5Q71RC9 77 aa14.31□□□□□ -0.12
DDX39A-203ENST00000454233 YY1P25490 414 aa14.3□□□□□ -0.12
DDX39A-203ENST00000454233 TRAPPC3LQ5T215 181 aa14.3□□□□□ -0.12
DDX39A-203ENST00000454233 CNTNAP4Q9C0A0 1308 aa14.3□□□□□ -0.12
DDX39A-203ENST00000454233 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
DDX39A-203ENST00000454233 ADRA2BP18089 450 aa14.29□□□□□ -0.12
DDX39A-203ENST00000454233 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
DDX39A-203ENST00000454233 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■□□□ 11.6
DDX39A-203ENST00000454233 MRC1P22897 1456 aa14.29□□□□□ -0.12
DDX39A-203ENST00000454233 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
DDX39A-203ENST00000454233 RPS6KA4O75676 772 aa14.28□□□□□ -0.12
DDX39A-203ENST00000454233 GPR162Q16538 588 aa14.28□□□□□ -0.12
DDX39A-203ENST00000454233 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.13
DDX39A-203ENST00000454233 TEFQ10587 303 aa14.27□□□□□ -0.13
DDX39A-203ENST00000454233 SLC39A6Q13433 755 aa14.27□□□□□ -0.13
DDX39A-203ENST00000454233 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
DDX39A-203ENST00000454233 NLGN2Q8NFZ4 835 aa14.27□□□□□ -0.13
DDX39A-203ENST00000454233 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
DDX39A-203ENST00000454233 COL5A3P25940 1745 aaPredicted RBP14.27□□□□□ -0.13
DDX39A-203ENST00000454233 FCHSD2O94868 740 aa14.26□□□□□ -0.13
DDX39A-203ENST00000454233 RFC4P35249 363 aa14.26□□□□□ -0.13
DDX39A-203ENST00000454233 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
DDX39A-203ENST00000454233 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
DDX39A-203ENST00000454233 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
DDX39A-203ENST00000454233 VIRMAQ69YN4 1812 aaKnown RBP14.26□□□□□ -0.13
DDX39A-203ENST00000454233 ADAMTS7Q9UKP4 1686 aa14.26□□□□□ -0.13
DDX39A-203ENST00000454233 NLGN1Q8N2Q7 840 aa14.25□□□□□ -0.13
DDX39A-203ENST00000454233 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
DDX39A-203ENST00000454233 NEFMP07197 916 aa14.24□□□□□ -0.13
DDX39A-203ENST00000454233 DNAJC10Q8IXB1 793 aa14.24□□□□□ -0.13
DDX39A-203ENST00000454233 IL17REQ8NFR9 667 aa14.24□□□□□ -0.13
DDX39A-203ENST00000454233 TJP1Q07157 1748 aa14.24□□□□□ -0.13
DDX39A-203ENST00000454233 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
DDX39A-203ENST00000454233 MMP10P09238 476 aa14.23□□□□□ -0.13
DDX39A-203ENST00000454233 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
DDX39A-203ENST00000454233 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
DDX39A-203ENST00000454233 CCDC87Q9NVE4 849 aa14.23□□□□□ -0.13
DDX39A-203ENST00000454233 MYH14Q7Z406 1995 aaKnown RBP14.23□□□□□ -0.13
DDX39A-203ENST00000454233 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
DDX39A-203ENST00000454233 INTS5Q6P9B9 1019 aaKnown RBP14.22□□□□□ -0.13
DDX39A-203ENST00000454233 KCPQ6ZWJ8 1503 aa14.21□□□□□ -0.13
DDX39A-203ENST00000454233 GRIN3BO60391 1043 aa14.21□□□□□ -0.13
DDX39A-203ENST00000454233 CYP19A1P11511 503 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-203ENST00000454233 GYS1P13807 737 aa14.21□□□□□ -0.13
DDX39A-203ENST00000454233 RALBP1Q15311 655 aa14.21□□□□□ -0.13
DDX39A-203ENST00000454233 ZNF790Q6PG37 636 aa14.21□□□□□ -0.13
DDX39A-203ENST00000454233 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.14
DDX39A-203ENST00000454233 STARD3NLO95772 234 aa14.2□□□□□ -0.14
DDX39A-203ENST00000454233 PARP3Q9Y6F1 533 aa14.2□□□□□ -0.14
DDX39A-203ENST00000454233 USP42Q9H9J4 1324 aaKnown RBP14.19□□□□□ -0.14
DDX39A-203ENST00000454233 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
DDX39A-203ENST00000454233 HTATSF1O43719 755 aaKnown RBP14.19□□□□□ -0.14
DDX39A-203ENST00000454233 ZPR1O75312 459 aa14.19□□□□□ -0.14
DDX39A-203ENST00000454233 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-203ENST00000454233 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
DDX39A-203ENST00000454233 TEX13AQ9BXU3 409 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-203ENST00000454233 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
DDX39A-203ENST00000454233 SRP68Q9UHB9 627 aaKnown RBP14.19□□□□□ -0.14
DDX39A-203ENST00000454233 CHD4Q14839 1912 aa14.19□□□□□ -0.14
DDX39A-203ENST00000454233 C4AP0C0L4 1744 aa14.18□□□□□ -0.14
DDX39A-203ENST00000454233 SOS1Q07889 1333 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-203ENST00000454233 MCM10Q7L590 875 aa14.18□□□□□ -0.14
DDX39A-203ENST00000454233 ZBTB1Q9Y2K1 713 aa14.18□□□□□ -0.14
DDX39A-203ENST00000454233 UBR2Q8IWV8 1755 aa14.18□□□□□ -0.14
DDX39A-203ENST00000454233 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
DDX39A-203ENST00000454233 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
DDX39A-203ENST00000454233 YBX3P16989 372 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX39A-203ENST00000454233 CANXP27824 592 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms