RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 FOXO3O43524 673 aa16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-210ENST00000453744 DNM1Q05193 864 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 TFIP11Q9UBB9 837 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 CHMLP26374 656 aa16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-210ENST00000453744 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.25
UBE2D3-210ENST00000453744 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.25
UBE2D3-210ENST00000453744 NECAB1Q8N987 351 aa16.58■□□□□ 0.25
UBE2D3-210ENST00000453744 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
UBE2D3-210ENST00000453744 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
UBE2D3-210ENST00000453744 PIBF1Q8WXW3 757 aa16.58■□□□□ 0.24
UBE2D3-210ENST00000453744 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
UBE2D3-210ENST00000453744 BECN2A8MW95 431 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 U2AF2P26368 475 aaKnown RBP eCLIP16.57■□□□□ 0.243e-9■■■□□ 15
UBE2D3-210ENST00000453744 CLEC17AQ6ZS10 378 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 IL13P35225 146 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 IQGAP1P46940 1657 aa16.57■□□□□ 0.24
UBE2D3-210ENST00000453744 UBE2HP62256 183 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 GJB2P29033 226 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 SLC52A1Q9NWF4 448 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 H3BQV1 296 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 SYT1P21579 422 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 NUP62CLQ9H1M0 184 aa16.56■□□□□ 0.24
UBE2D3-210ENST00000453744 PNMA6EA0A0J9YXQ4 647 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 LIMCH1Q9UPQ0 1083 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 KDM4AO75164 1064 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 PTGS1P23219 599 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 UNC5CLQ8IV45 518 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 BCL2L12Q9HB09 334 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 AK2P54819 239 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
UBE2D3-210ENST00000453744 FLIIQ13045 1269 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 PTPRCP08575 1304 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-210ENST00000453744 KRT85P78386 507 aa16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 TNNT1P13805 278 aa16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 LUZP1Q86V48 1076 aa16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 CCDC61Q9Y6R9 512 aa16.53■□□□□ 0.24
UBE2D3-210ENST00000453744 F13A1P00488 732 aa16.52■□□□□ 0.24
UBE2D3-210ENST00000453744 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
UBE2D3-210ENST00000453744 ABCA6Q8N139 1617 aa16.52■□□□□ 0.24
UBE2D3-210ENST00000453744 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.24
UBE2D3-210ENST00000453744 PPFIA3O75145 1194 aa16.52■□□□□ 0.23
UBE2D3-210ENST00000453744 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.23
UBE2D3-210ENST00000453744 PYCARDQ9ULZ3 195 aa16.52■□□□□ 0.23
UBE2D3-210ENST00000453744 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
UBE2D3-210ENST00000453744 CLASRPQ8N2M8 674 aaKnown RBP16.52■□□□□ 0.23
UBE2D3-210ENST00000453744 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 MYOM2P54296 1465 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 ERICH4A6NGS2 130 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 NPATQ14207 1427 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 TPM3P06753 285 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 BRPF1P55201 1214 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 LMOD2Q6P5Q4 547 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 CEP152O94986 1710 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 ANXA1P04083 346 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
UBE2D3-210ENST00000453744 ANAPC15P60006 121 aa16.5■□□□□ 0.23
UBE2D3-210ENST00000453744 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
UBE2D3-210ENST00000453744 VIRMAQ69YN4 1812 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-210ENST00000453744 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
UBE2D3-210ENST00000453744 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
UBE2D3-210ENST00000453744 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms