RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
HLA-DPA1-244ENST00000453337 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
HLA-DPA1-244ENST00000453337 KDM6AO15550 1401 aaPredicted RBP16.17■□□□□ 0.18
HLA-DPA1-244ENST00000453337 A0A0G2JS52 829 aa16.16■□□□□ 0.18
HLA-DPA1-244ENST00000453337 MYT1Q01538 1121 aa16.16■□□□□ 0.18
HLA-DPA1-244ENST00000453337 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
HLA-DPA1-244ENST00000453337 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
HLA-DPA1-244ENST00000453337 VAMP4O75379 141 aa16.15■□□□□ 0.18
HLA-DPA1-244ENST00000453337 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
HLA-DPA1-244ENST00000453337 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
HLA-DPA1-244ENST00000453337 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
HLA-DPA1-244ENST00000453337 GLI3P10071 1580 aa16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 TSPYL6Q8N831 410 aa16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
HLA-DPA1-244ENST00000453337 MRC1P22897 1456 aa16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 NEFLP07196 543 aa16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 TMOD3Q9NYL9 352 aa16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 ITGB4P16144 1822 aa16.12■□□□□ 0.17
HLA-DPA1-244ENST00000453337 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
HLA-DPA1-244ENST00000453337 SEPT12Q8IYM1 358 aa16.11■□□□□ 0.17
HLA-DPA1-244ENST00000453337 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
HLA-DPA1-244ENST00000453337 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
HLA-DPA1-244ENST00000453337 HOXB7P09629 217 aa16.1■□□□□ 0.17
HLA-DPA1-244ENST00000453337 KCNQ3O43525 872 aa16.09■□□□□ 0.17
HLA-DPA1-244ENST00000453337 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
HLA-DPA1-244ENST00000453337 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
HLA-DPA1-244ENST00000453337 BCAR3O75815 825 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 RXRBP28702 533 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 PRIM1P49642 420 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 BRPF1P55201 1214 aaPredicted RBP16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 PIGBQ92521 554 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.16
HLA-DPA1-244ENST00000453337 IPO8O15397 1037 aaKnown RBP16.07■□□□□ 0.16
HLA-DPA1-244ENST00000453337 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
HLA-DPA1-244ENST00000453337 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
HLA-DPA1-244ENST00000453337 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
HLA-DPA1-244ENST00000453337 BCL9O00512 1426 aa16.05■□□□□ 0.16
HLA-DPA1-244ENST00000453337 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
HLA-DPA1-244ENST00000453337 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
HLA-DPA1-244ENST00000453337 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
HLA-DPA1-244ENST00000453337 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
HLA-DPA1-244ENST00000453337 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 MS4A1P11836 297 aa16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 BCL2L13Q9BXK5 485 aa16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
HLA-DPA1-244ENST00000453337 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ZKSCAN2Q63HK3 967 aa16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ARHGAP45Q92619 1136 aa16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 TEX13AQ9BXU3 409 aaPredicted RBP16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 RGS17Q9UGC6 210 aaPredicted RBP16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ASAP1Q9ULH1 1129 aa16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
HLA-DPA1-244ENST00000453337 PLIN1O60240 522 aa16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 ERICH6BQ5W0A0 696 aa16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 SMARCC1Q92922 1105 aaPredicted RBP16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
HLA-DPA1-244ENST00000453337 UBR2Q8IWV8 1755 aa16.02■□□□□ 0.15
HLA-DPA1-244ENST00000453337 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
HLA-DPA1-244ENST00000453337 TCERG1O14776 1098 aaKnown RBP16.01■□□□□ 0.15
HLA-DPA1-244ENST00000453337 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
HLA-DPA1-244ENST00000453337 FKBP8Q14318 412 aa16.01■□□□□ 0.15
HLA-DPA1-244ENST00000453337 VSIG10Q8N0Z9 540 aa16.01■□□□□ 0.15
HLA-DPA1-244ENST00000453337 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
HLA-DPA1-244ENST00000453337 NECTIN2Q92692 538 aa16■□□□□ 0.15
HLA-DPA1-244ENST00000453337 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
HLA-DPA1-244ENST00000453337 SBF2Q86WG5 1849 aa16■□□□□ 0.15
HLA-DPA1-244ENST00000453337 KCNQ2O43526 872 aa15.99■□□□□ 0.15
HLA-DPA1-244ENST00000453337 POTEAQ6S8J7 498 aa15.99■□□□□ 0.15
HLA-DPA1-244ENST00000453337 ATF7IPQ6VMQ6 1270 aa15.99■□□□□ 0.15
HLA-DPA1-244ENST00000453337 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
HLA-DPA1-244ENST00000453337 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
HLA-DPA1-244ENST00000453337 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
HLA-DPA1-244ENST00000453337 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
HLA-DPA1-244ENST00000453337 API5Q9BZZ5 524 aaKnown RBP15.98■□□□□ 0.15
HLA-DPA1-244ENST00000453337 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
HLA-DPA1-244ENST00000453337 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
HLA-DPA1-244ENST00000453337 PTPRCP08575 1304 aa15.97■□□□□ 0.15
HLA-DPA1-244ENST00000453337 STARD3NLO95772 234 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms