RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 CCDC30Q5VVM6 783 aa31.2■■■□□ 2.59
MCF2L-219ENST00000453297 COL16A1Q07092 1604 aaPredicted RBP31.2■■■□□ 2.58
MCF2L-219ENST00000453297 EVA1CP58658 441 aa31.19■■■□□ 2.58
MCF2L-219ENST00000453297 STRN4Q9NRL3 753 aa31.19■■■□□ 2.58
MCF2L-219ENST00000453297 RGS12O14924 1447 aa31.19■■■□□ 2.58
MCF2L-219ENST00000453297 KDM6AO15550 1401 aaPredicted RBP31.19■■■□□ 2.58
MCF2L-219ENST00000453297 COL14A1Q05707 1796 aaKnown RBP31.19■■■□□ 2.58
MCF2L-219ENST00000453297 CACNA1FO60840 1977 aa31.19■■■□□ 2.58
MCF2L-219ENST00000453297 KCNQ3O43525 872 aa31.19■■■□□ 2.58
MCF2L-219ENST00000453297 TOM1O60784 492 aa31.18■■■□□ 2.58
MCF2L-219ENST00000453297 LARP1Q6PKG0 1096 aaKnown RBP31.18■■■□□ 2.58
MCF2L-219ENST00000453297 STK31Q9BXU1 1019 aa31.18■■■□□ 2.58
MCF2L-219ENST00000453297 CYP27B1O15528 508 aa31.17■■■□□ 2.58
MCF2L-219ENST00000453297 ZBTB7BO15156 539 aaPredicted RBP31.17■■■□□ 2.58
MCF2L-219ENST00000453297 G2E3Q7L622 706 aa31.16■■■□□ 2.58
MCF2L-219ENST00000453297 CHMP4BQ9H444 224 aaKnown RBP31.16■■■□□ 2.58
MCF2L-219ENST00000453297 SKAP1Q86WV1 359 aa31.15■■■□□ 2.58
MCF2L-219ENST00000453297 RWDD1Q9H446 243 aaPredicted RBP31.15■■■□□ 2.58
MCF2L-219ENST00000453297 HOXB7P09629 217 aa31.14■■■□□ 2.58
MCF2L-219ENST00000453297 BTG4Q9NY30 223 aa31.14■■■□□ 2.58
MCF2L-219ENST00000453297 INTS3Q68E01 1043 aaKnown RBP31.13■■■□□ 2.57
MCF2L-219ENST00000453297 NECTIN2Q92692 538 aa31.13■■■□□ 2.57
MCF2L-219ENST00000453297 DCAF5Q96JK2 942 aa31.13■■■□□ 2.57
MCF2L-219ENST00000453297 SLC52A2Q9HAB3 445 aa31.12■■■□□ 2.57
MCF2L-219ENST00000453297 HSP90AB1P08238 724 aaKnown RBP31.12■■■□□ 2.57
MCF2L-219ENST00000453297 IL2RBP14784 551 aa31.12■■■□□ 2.57
MCF2L-219ENST00000453297 HDGFL1Q5TGJ6 251 aa31.12■■■□□ 2.57
MCF2L-219ENST00000453297 ZCRB1Q8TBF4 217 aaKnown RBP31.12■■■□□ 2.57
MCF2L-219ENST00000453297 PIP4K2BP78356 416 aa31.11■■■□□ 2.57
MCF2L-219ENST00000453297 MRC1P22897 1456 aa31.1■■■□□ 2.57
MCF2L-219ENST00000453297 HEG1Q9ULI3 1381 aa31.1■■■□□ 2.57
MCF2L-219ENST00000453297 CHMP4AQ9BY43 222 aa31.09■■■□□ 2.57
MCF2L-219ENST00000453297 HDAC1Q13547 482 aaPredicted RBP31.08■■■□□ 2.57
MCF2L-219ENST00000453297 RBM19Q9Y4C8 960 aaKnown RBP31.08■■■□□ 2.57
MCF2L-219ENST00000453297 PCDH11XQ9BZA7 1347 aa31.08■■■□□ 2.57
MCF2L-219ENST00000453297 PCDH11YQ9BZA8 1340 aa31.08■■■□□ 2.57
MCF2L-219ENST00000453297 SHANK3Q9BYB0 1731 aa31.07■■■□□ 2.56
MCF2L-219ENST00000453297 FLIIQ13045 1269 aa31.07■■■□□ 2.56
MCF2L-219ENST00000453297 NFATC2IPQ8NCF5 419 aa31.07■■■□□ 2.56
MCF2L-219ENST00000453297 EIF2S2P20042 333 aaKnown RBP31.05■■■□□ 2.56
MCF2L-219ENST00000453297 GIGYF1O75420 1035 aaPredicted RBP31.04■■■□□ 2.56
MCF2L-219ENST00000453297 ZNF790Q6PG37 636 aa31.03■■■□□ 2.56
MCF2L-219ENST00000453297 UBAP1LF5GYI3 381 aa31.03■■■□□ 2.56
MCF2L-219ENST00000453297 F6X3S4 739 aa31.02■■■□□ 2.56
MCF2L-219ENST00000453297 PLCH1Q4KWH8 1693 aa31.01■■■□□ 2.56
MCF2L-219ENST00000453297 SLC39A6Q13433 755 aa31.01■■■□□ 2.56
MCF2L-219ENST00000453297 FKBP5Q13451 457 aaPredicted RBP31.01■■■□□ 2.56
MCF2L-219ENST00000453297 USP35Q9P2H5 1018 aa31.01■■■□□ 2.56
MCF2L-219ENST00000453297 CABP4P57796 275 aa31■■■□□ 2.55
MCF2L-219ENST00000453297 NKX1-1Q15270 411 aaPredicted RBP31■■■□□ 2.55
MCF2L-219ENST00000453297 C1orf115Q9H7X2 142 aa31■■■□□ 2.55
MCF2L-219ENST00000453297 CHPF2Q9P2E5 772 aa31■■■□□ 2.55
MCF2L-219ENST00000453297 CCT4P50991 539 aaKnown RBP30.99■■■□□ 2.55
MCF2L-219ENST00000453297 RGS3P49796 1198 aa30.98■■■□□ 2.55
MCF2L-219ENST00000453297 SLC4A10Q6U841 1118 aa30.98■■■□□ 2.55
MCF2L-219ENST00000453297 PHAXQ9H814 394 aaKnown RBP30.98■■■□□ 2.55
MCF2L-219ENST00000453297 N4BP2Q86UW6 1770 aaPredicted RBP30.97■■■□□ 2.55
MCF2L-219ENST00000453297 ADAMTS2O95450 1211 aa30.97■■■□□ 2.55
MCF2L-219ENST00000453297 PDZRN3Q9UPQ7 1066 aa30.97■■■□□ 2.55
MCF2L-219ENST00000453297 PRAMEF22A3QJZ6 481 aa30.96■■■□□ 2.55
MCF2L-219ENST00000453297 DDX54Q8TDD1 881 aaKnown RBP30.96■■■□□ 2.55
MCF2L-219ENST00000453297 C5P01031 1676 aa30.96■■■□□ 2.55
MCF2L-219ENST00000453297 SMC5Q8IY18 1101 aa30.95■■■□□ 2.55
MCF2L-219ENST00000453297 DBF4Q9UBU7 674 aaPredicted RBP30.95■■■□□ 2.55
MCF2L-219ENST00000453297 DISP2A7MBM2 1401 aa30.95■■■□□ 2.54
MCF2L-219ENST00000453297 ERVV-2B6SEH9 535 aa30.94■■■□□ 2.54
MCF2L-219ENST00000453297 NRAPQ86VF7 1730 aa30.94■■■□□ 2.54
MCF2L-219ENST00000453297 PXDNLA1KZ92 1463 aa30.94■■■□□ 2.54
MCF2L-219ENST00000453297 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
MCF2L-219ENST00000453297 TTC5Q8N0Z6 440 aa30.93■■■□□ 2.54
MCF2L-219ENST00000453297 NUTM2BA6NNL0 878 aaPredicted RBP30.92■■■□□ 2.54
MCF2L-219ENST00000453297 NUTM2EB1AL46 878 aaPredicted RBP30.92■■■□□ 2.54
MCF2L-219ENST00000453297 NUTM2AQ8IVF1 878 aaPredicted RBP30.92■■■□□ 2.54
MCF2L-219ENST00000453297 ZNF496Q96IT1 587 aaPredicted RBP30.92■■■□□ 2.54
MCF2L-219ENST00000453297 MEIS3Q99687 375 aa30.92■■■□□ 2.54
MCF2L-219ENST00000453297 WNK3Q9BYP7 1800 aa30.92■■■□□ 2.54
MCF2L-219ENST00000453297 SIRT2Q8IXJ6 389 aa30.91■■■□□ 2.54
MCF2L-219ENST00000453297 ANXA1P04083 346 aa30.91■■■□□ 2.54
MCF2L-219ENST00000453297 PDE4AP27815 886 aa30.91■■■□□ 2.54
MCF2L-219ENST00000453297 FMNL2Q96PY5 1086 aa30.89■■■□□ 2.53
MCF2L-219ENST00000453297 TOGARAM1Q9Y4F4 1720 aa30.88■■■□□ 2.53
MCF2L-219ENST00000453297 PROSER3Q2NL68 480 aa30.87■■■□□ 2.53
MCF2L-219ENST00000453297 BACH2Q9BYV9 841 aa30.87■■■□□ 2.53
MCF2L-219ENST00000453297 NWD2Q9ULI1 1742 aa30.87■■■□□ 2.53
MCF2L-219ENST00000453297 ATP10DQ9P241 1426 aa30.87■■■□□ 2.53
MCF2L-219ENST00000453297 SNRPA1P09661 255 aaKnown RBP30.87■■■□□ 2.53
MCF2L-219ENST00000453297 PAPPAQ13219 1627 aa30.86■■■□□ 2.53
MCF2L-219ENST00000453297 DDX21Q9NR30 783 aaKnown RBP eCLIP30.86■■■□□ 2.53
MCF2L-219ENST00000453297 HYPKQ9NX55 129 aa30.86■■■□□ 2.53
MCF2L-219ENST00000453297 GLI3P10071 1580 aa30.86■■■□□ 2.53
MCF2L-219ENST00000453297 UBR2Q8IWV8 1755 aa30.85■■■□□ 2.53
MCF2L-219ENST00000453297 RPAP2Q8IXW5 612 aaPredicted RBP30.85■■■□□ 2.53
MCF2L-219ENST00000453297 ANKRD44Q8N8A2 993 aa30.85■■■□□ 2.53
MCF2L-219ENST00000453297 GCC1Q96CN9 775 aa30.84■■■□□ 2.53
MCF2L-219ENST00000453297 PDIA6Q15084 440 aa30.84■■■□□ 2.53
MCF2L-219ENST00000453297 PI4KAP2A4QPH2 592 aa30.83■■■□□ 2.53
MCF2L-219ENST00000453297 PI4KAP1Q8N8J0 262 aa30.83■■■□□ 2.53
MCF2L-219ENST00000453297 CEP85Q6P2H3 762 aa30.82■■■□□ 2.52
MCF2L-219ENST00000453297 CERKQ8TCT0 537 aa30.82■■■□□ 2.52
MCF2L-219ENST00000453297 DNAAF4Q8WXU2 420 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms