RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
LINC00963-206ENST00000453213 KIAA1551Q9HCM1 1747 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 KIF13BQ9NQT8 1826 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 KCNA3P22001 575 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 PRDM10Q9NQV6 1147 aa12.12□□□□□ -0.47
LINC00963-206ENST00000453213 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
LINC00963-206ENST00000453213 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
LINC00963-206ENST00000453213 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
LINC00963-206ENST00000453213 FOXN1O15353 648 aa12.11□□□□□ -0.47
LINC00963-206ENST00000453213 CYP27B1O15528 508 aa12.11□□□□□ -0.47
LINC00963-206ENST00000453213 ITPK1Q13572 414 aa12.11□□□□□ -0.47
LINC00963-206ENST00000453213 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
LINC00963-206ENST00000453213 ZC3H4Q9UPT8 1303 aaKnown RBP12.11□□□□□ -0.47
LINC00963-206ENST00000453213 A0A1W2PP64 1363 aa12.1□□□□□ -0.47
LINC00963-206ENST00000453213 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
LINC00963-206ENST00000453213 FBLN1P23142 703 aa12.1□□□□□ -0.47
LINC00963-206ENST00000453213 AIDAQ96BJ3 306 aa12.1□□□□□ -0.47
LINC00963-206ENST00000453213 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
LINC00963-206ENST00000453213 GLTPD2A6NH11 291 aa12.09□□□□□ -0.47
LINC00963-206ENST00000453213 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
LINC00963-206ENST00000453213 GYS1P13807 737 aa12.08□□□□□ -0.48
LINC00963-206ENST00000453213 ADRA2BP18089 450 aa12.08□□□□□ -0.48
LINC00963-206ENST00000453213 RFC4P35249 363 aa12.08□□□□□ -0.48
LINC00963-206ENST00000453213 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
LINC00963-206ENST00000453213 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
LINC00963-206ENST00000453213 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
LINC00963-206ENST00000453213 ASAP1Q9ULH1 1129 aa12.08□□□□□ -0.48
LINC00963-206ENST00000453213 RGPD2P0DJD1 1756 aa12.07□□□□□ -0.48
LINC00963-206ENST00000453213 C4AP0C0L4 1744 aa12.07□□□□□ -0.48
LINC00963-206ENST00000453213 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
LINC00963-206ENST00000453213 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
LINC00963-206ENST00000453213 LMNB1P20700 586 aa12.06□□□□□ -0.48
LINC00963-206ENST00000453213 RASSF7Q02833 373 aa12.06□□□□□ -0.48
LINC00963-206ENST00000453213 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
LINC00963-206ENST00000453213 ARFGEF1Q9Y6D6 1849 aa12.06□□□□□ -0.48
LINC00963-206ENST00000453213 CHRNA5P30532 468 aa12.05□□□□□ -0.48
LINC00963-206ENST00000453213 MLLT1Q03111 559 aaPredicted RBP12.05□□□□□ -0.48
LINC00963-206ENST00000453213 ABHD8Q96I13 439 aa12.05□□□□□ -0.48
LINC00963-206ENST00000453213 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
LINC00963-206ENST00000453213 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
LINC00963-206ENST00000453213 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
LINC00963-206ENST00000453213 ATG3Q9NT62 314 aa12.04□□□□□ -0.48
LINC00963-206ENST00000453213 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
LINC00963-206ENST00000453213 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-206ENST00000453213 ITGB4P16144 1822 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 RPS6KA4O75676 772 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 LBX1P52954 281 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 HSP90AB2PQ58FF8 381 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
LINC00963-206ENST00000453213 INSRP06213 1382 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 CNTNAP1P78357 1384 aa12.03□□□□□ -0.48
LINC00963-206ENST00000453213 CNTNAP4Q9C0A0 1308 aa12.02□□□□□ -0.49
LINC00963-206ENST00000453213 POTECB2RU33 542 aa12.01□□□□□ -0.49
LINC00963-206ENST00000453213 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
LINC00963-206ENST00000453213 CCDC85CA6NKD9 419 aa12□□□□□ -0.49
LINC00963-206ENST00000453213 DDR1Q08345 913 aa12□□□□□ -0.49
LINC00963-206ENST00000453213 FKBP8Q14318 412 aa12□□□□□ -0.49
LINC00963-206ENST00000453213 WBP1LQ9NX94 342 aa12□□□□□ -0.49
LINC00963-206ENST00000453213 FLT4P35916 1363 aa12□□□□□ -0.49
LINC00963-206ENST00000453213 KDRP35968 1356 aa12□□□□□ -0.49
LINC00963-206ENST00000453213 VEGFBP49765 207 aa11.99□□□□□ -0.49
LINC00963-206ENST00000453213 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
LINC00963-206ENST00000453213 SLC4A9Q96Q91 983 aa11.99□□□□□ -0.49
LINC00963-206ENST00000453213 CARD11Q9BXL7 1154 aa11.99□□□□□ -0.49
LINC00963-206ENST00000453213 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
LINC00963-206ENST00000453213 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
LINC00963-206ENST00000453213 SBF1O95248 1867 aa11.98□□□□□ -0.49
LINC00963-206ENST00000453213 PHKG2P15735 406 aa11.98□□□□□ -0.49
LINC00963-206ENST00000453213 RGS19P49795 217 aa11.98□□□□□ -0.49
LINC00963-206ENST00000453213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00963-206ENST00000453213 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
LINC00963-206ENST00000453213 USP42Q9H9J4 1324 aaKnown RBP11.97□□□□□ -0.49
LINC00963-206ENST00000453213 POLRMTO00411 1230 aaKnown RBP11.97□□□□□ -0.49
LINC00963-206ENST00000453213 FYB1O15117 783 aa11.97□□□□□ -0.49
LINC00963-206ENST00000453213 HSPA8P11142 646 aaKnown RBP11.97□□□□□ -0.49
LINC00963-206ENST00000453213 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
LINC00963-206ENST00000453213 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.49
LINC00963-206ENST00000453213 NFKBIEO00221 500 aa11.96□□□□□ -0.49
LINC00963-206ENST00000453213 PASKQ96RG2 1323 aa11.95□□□□□ -0.5
LINC00963-206ENST00000453213 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
LINC00963-206ENST00000453213 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
LINC00963-206ENST00000453213 TM4SF1P30408 202 aa11.95□□□□□ -0.5
LINC00963-206ENST00000453213 CRKLP46109 303 aaKnown RBP11.95□□□□□ -0.5
LINC00963-206ENST00000453213 MAP2K1Q02750 393 aaPredicted RBP11.95□□□□□ -0.5
LINC00963-206ENST00000453213 ERFEQ4G0M1 354 aa11.95□□□□□ -0.5
LINC00963-206ENST00000453213 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
LINC00963-206ENST00000453213 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
LINC00963-206ENST00000453213 ZPR1O75312 459 aa11.94□□□□□ -0.5
LINC00963-206ENST00000453213 LDHDQ86WU2 507 aa11.94□□□□□ -0.5
LINC00963-206ENST00000453213 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
LINC00963-206ENST00000453213 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
LINC00963-206ENST00000453213 C2CD5Q86YS7 1000 aa11.93□□□□□ -0.5
LINC00963-206ENST00000453213 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
LINC00963-206ENST00000453213 ZNF831Q5JPB2 1677 aa11.93□□□□□ -0.5
LINC00963-206ENST00000453213 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms