RNA–Protein interactions for RNA: ENST00000452980.5

UBXN11-212, Transcript of UBX domain protein 11, humanhuman

TSL 3

Gene UBXN11, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-212ENST00000452980 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
UBXN11-212ENST00000452980 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
UBXN11-212ENST00000452980 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
UBXN11-212ENST00000452980 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
UBXN11-212ENST00000452980 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
UBXN11-212ENST00000452980 PCNTO95613 3336 aa17.02■□□□□ 0.31
UBXN11-212ENST00000452980 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.31
UBXN11-212ENST00000452980 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
UBXN11-212ENST00000452980 TMF1P82094 1093 aa17.01■□□□□ 0.31
UBXN11-212ENST00000452980 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
UBXN11-212ENST00000452980 SMIM5Q71RC9 77 aa17.01■□□□□ 0.31
UBXN11-212ENST00000452980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
UBXN11-212ENST00000452980 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
UBXN11-212ENST00000452980 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
UBXN11-212ENST00000452980 FCHSD2O94868 740 aa17■□□□□ 0.31
UBXN11-212ENST00000452980 ADRA2BP18089 450 aa17■□□□□ 0.31
UBXN11-212ENST00000452980 FSTL1Q12841 308 aa17■□□□□ 0.31
UBXN11-212ENST00000452980 CDCA8Q53HL2 280 aa17■□□□□ 0.31
UBXN11-212ENST00000452980 NMRK2Q9NPI5 230 aa17■□□□□ 0.31
UBXN11-212ENST00000452980 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
UBXN11-212ENST00000452980 NCAPD2Q15021 1401 aa16.99■□□□□ 0.31
UBXN11-212ENST00000452980 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
UBXN11-212ENST00000452980 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
UBXN11-212ENST00000452980 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
UBXN11-212ENST00000452980 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
UBXN11-212ENST00000452980 ITPK1Q13572 414 aa16.98■□□□□ 0.31
UBXN11-212ENST00000452980 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
UBXN11-212ENST00000452980 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
UBXN11-212ENST00000452980 ANKRD26Q9UPS8 1709 aa16.98■□□□□ 0.31
UBXN11-212ENST00000452980 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
UBXN11-212ENST00000452980 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
UBXN11-212ENST00000452980 DPEP1P16444 411 aa16.96■□□□□ 0.31
UBXN11-212ENST00000452980 RFC4P35249 363 aa16.96■□□□□ 0.31
UBXN11-212ENST00000452980 C9orf131Q5VYM1 1079 aa16.96■□□□□ 0.31
UBXN11-212ENST00000452980 PHKG2P15735 406 aa16.95■□□□□ 0.3
UBXN11-212ENST00000452980 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
UBXN11-212ENST00000452980 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
UBXN11-212ENST00000452980 COL5A3P25940 1745 aaPredicted RBP16.95■□□□□ 0.3
UBXN11-212ENST00000452980 KDRP35968 1356 aa16.94■□□□□ 0.3
UBXN11-212ENST00000452980 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
UBXN11-212ENST00000452980 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
UBXN11-212ENST00000452980 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
UBXN11-212ENST00000452980 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
UBXN11-212ENST00000452980 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
UBXN11-212ENST00000452980 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
UBXN11-212ENST00000452980 TNS4Q8IZW8 715 aa16.93■□□□□ 0.3
UBXN11-212ENST00000452980 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
UBXN11-212ENST00000452980 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
UBXN11-212ENST00000452980 WASHC2AQ641Q2 1341 aa16.93■□□□□ 0.3
UBXN11-212ENST00000452980 CAPN15O75808 1086 aa16.92■□□□□ 0.3
UBXN11-212ENST00000452980 GYS1P13807 737 aa16.92■□□□□ 0.3
UBXN11-212ENST00000452980 COL13A1Q5TAT6 717 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-212ENST00000452980 SMC1BQ8NDV3 1235 aa16.92■□□□□ 0.3
UBXN11-212ENST00000452980 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
UBXN11-212ENST00000452980 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
UBXN11-212ENST00000452980 SBF1O95248 1867 aa16.92■□□□□ 0.3
UBXN11-212ENST00000452980 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
UBXN11-212ENST00000452980 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
UBXN11-212ENST00000452980 ERVV-2B6SEH9 535 aa16.91■□□□□ 0.3
UBXN11-212ENST00000452980 EYA1Q99502 592 aa16.91■□□□□ 0.3
UBXN11-212ENST00000452980 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
UBXN11-212ENST00000452980 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
UBXN11-212ENST00000452980 ZC3H4Q9UPT8 1303 aaKnown RBP16.9■□□□□ 0.3
UBXN11-212ENST00000452980 HTRA3P83110 453 aa16.89■□□□□ 0.29
UBXN11-212ENST00000452980 PRELPP51888 382 aa16.88■□□□□ 0.29
UBXN11-212ENST00000452980 RRAGCQ9HB90 399 aa16.87■□□□□ 0.29
UBXN11-212ENST00000452980 KCNA3P22001 575 aa16.86■□□□□ 0.29
UBXN11-212ENST00000452980 CABP4P57796 275 aa16.86■□□□□ 0.29
UBXN11-212ENST00000452980 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
UBXN11-212ENST00000452980 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
UBXN11-212ENST00000452980 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
UBXN11-212ENST00000452980 USP42Q9H9J4 1324 aaKnown RBP16.84■□□□□ 0.29
UBXN11-212ENST00000452980 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
UBXN11-212ENST00000452980 AMOTQ4VCS5 1084 aa16.83■□□□□ 0.28
UBXN11-212ENST00000452980 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
UBXN11-212ENST00000452980 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
UBXN11-212ENST00000452980 C1orf141Q5JVX7 400 aa16.82■□□□□ 0.28
UBXN11-212ENST00000452980 ZNF530Q6P9A1 599 aaPredicted RBP16.82■□□□□ 0.28
UBXN11-212ENST00000452980 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
UBXN11-212ENST00000452980 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
UBXN11-212ENST00000452980 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
UBXN11-212ENST00000452980 ZPR1O75312 459 aa16.81■□□□□ 0.28
UBXN11-212ENST00000452980 FKBP8Q14318 412 aa16.81■□□□□ 0.28
UBXN11-212ENST00000452980 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
UBXN11-212ENST00000452980 HSPA1AP0DMV8 641 aaKnown RBP16.8■□□□□ 0.28
UBXN11-212ENST00000452980 HSPA1BP0DMV9 641 aaKnown RBP16.8■□□□□ 0.28
UBXN11-212ENST00000452980 LMNB1P20700 586 aa16.8■□□□□ 0.28
UBXN11-212ENST00000452980 CHRNA5P30532 468 aa16.8■□□□□ 0.28
UBXN11-212ENST00000452980 MTHFSP49914 203 aa16.8■□□□□ 0.28
UBXN11-212ENST00000452980 DDR1Q08345 913 aa16.8■□□□□ 0.28
UBXN11-212ENST00000452980 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
UBXN11-212ENST00000452980 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
UBXN11-212ENST00000452980 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
UBXN11-212ENST00000452980 TJP1Q07157 1748 aa16.79■□□□□ 0.28
UBXN11-212ENST00000452980 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
UBXN11-212ENST00000452980 GLTPD2A6NH11 291 aa16.78■□□□□ 0.28
UBXN11-212ENST00000452980 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
UBXN11-212ENST00000452980 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
UBXN11-212ENST00000452980 RASSF7Q02833 373 aa16.77■□□□□ 0.28
UBXN11-212ENST00000452980 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms