RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 RGS3P49796 1198 aa10.87□□□□□ -0.67
DDB1-203ENST00000451943 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
DDB1-203ENST00000451943 GLI3P10071 1580 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 ALS2Q96Q42 1657 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 CAMTA1Q9Y6Y1 1673 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 SEPT12Q8IYM1 358 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 ANP32EQ9BTT0 268 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 CEMIPQ8WUJ3 1361 aa10.86□□□□□ -0.67
DDB1-203ENST00000451943 NBPF6Q5VWK0 638 aa10.85□□□□□ -0.67
DDB1-203ENST00000451943 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
DDB1-203ENST00000451943 NBPF4Q96M43 638 aa10.85□□□□□ -0.67
DDB1-203ENST00000451943 PLEKHG2Q9H7P9 1386 aa10.85□□□□□ -0.67
DDB1-203ENST00000451943 BRWD3Q6RI45 1802 aa10.84□□□□□ -0.67
DDB1-203ENST00000451943 TAF7Q15545 349 aaPredicted RBP10.84□□□□□ -0.67
DDB1-203ENST00000451943 BTG4Q9NY30 223 aa10.84□□□□□ -0.67
DDB1-203ENST00000451943 NOP58Q9Y2X3 529 aaKnown RBP10.84□□□□□ -0.67
DDB1-203ENST00000451943 NWD2Q9ULI1 1742 aa10.84□□□□□ -0.67
DDB1-203ENST00000451943 ABCC6O95255 1503 aa10.84□□□□□ -0.67
DDB1-203ENST00000451943 OVOS2A0A0G2JMS6 1433 aa10.84□□□□□ -0.67
DDB1-203ENST00000451943 KRT24Q2M2I5 525 aa10.83□□□□□ -0.68
DDB1-203ENST00000451943 AMOTQ4VCS5 1084 aa10.83□□□□□ -0.68
DDB1-203ENST00000451943 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
DDB1-203ENST00000451943 LTV1Q96GA3 475 aaPredicted RBP10.83□□□□□ -0.68
DDB1-203ENST00000451943 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
DDB1-203ENST00000451943 ABCA3Q99758 1704 aa10.83□□□□□ -0.68
DDB1-203ENST00000451943 LMO7Q8WWI1 1683 aa10.82□□□□□ -0.68
DDB1-203ENST00000451943 VIRMAQ69YN4 1812 aaKnown RBP10.82□□□□□ -0.68
DDB1-203ENST00000451943 NUCB1Q02818 461 aa10.82□□□□□ -0.68
DDB1-203ENST00000451943 PLEKHO1Q53GL0 409 aaPredicted RBP10.82□□□□□ -0.68
DDB1-203ENST00000451943 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
DDB1-203ENST00000451943 PLCH1Q4KWH8 1693 aa10.82□□□□□ -0.68
DDB1-203ENST00000451943 HOXB7P09629 217 aa10.81□□□□□ -0.68
DDB1-203ENST00000451943 AKAP4Q5JQC9 854 aa10.81□□□□□ -0.68
DDB1-203ENST00000451943 KRT27Q7Z3Y8 459 aa10.81□□□□□ -0.68
DDB1-203ENST00000451943 ANKRD24Q8TF21 1146 aa10.81□□□□□ -0.68
DDB1-203ENST00000451943 CHMP4AQ9BY43 222 aa10.81□□□□□ -0.68
DDB1-203ENST00000451943 MIS18AQ9NYP9 233 aa10.81□□□□□ -0.68
DDB1-203ENST00000451943 ZBTB47Q9UFB7 747 aaPredicted RBP10.81□□□□□ -0.68
DDB1-203ENST00000451943 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
DDB1-203ENST00000451943 CCDC30Q5VVM6 783 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 ERICH6Q7L0X2 663 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 USHBP1Q8N6Y0 703 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 PRDM11Q9NQV5 511 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 SPATA31A5Q5VU36 1347 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 SPATA31A7Q8IWB4 1347 aa10.8□□□□□ -0.68
DDB1-203ENST00000451943 DEFB132Q7Z7B7 95 aa10.79□□□□□ -0.68
DDB1-203ENST00000451943 NPM2Q86SE8 214 aaKnown RBP10.79□□□□□ -0.68
DDB1-203ENST00000451943 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
DDB1-203ENST00000451943 SIRT2Q8IXJ6 389 aa10.79□□□□□ -0.68
DDB1-203ENST00000451943 RPAP2Q8IXW5 612 aaPredicted RBP10.79□□□□□ -0.68
DDB1-203ENST00000451943 STK31Q9BXU1 1019 aa10.79□□□□□ -0.68
DDB1-203ENST00000451943 ERBB3P21860 1342 aa10.79□□□□□ -0.68
DDB1-203ENST00000451943 ADAMTS7Q9UKP4 1686 aa10.79□□□□□ -0.68
DDB1-203ENST00000451943 CPDO75976 1380 aa10.78□□□□□ -0.68
DDB1-203ENST00000451943 COL14A1Q05707 1796 aaKnown RBP10.78□□□□□ -0.68
DDB1-203ENST00000451943 CCT4P50991 539 aaKnown RBP10.78□□□□□ -0.68
DDB1-203ENST00000451943 ZC3H6P61129 1189 aaKnown RBP10.78□□□□□ -0.68
DDB1-203ENST00000451943 ANKRD44Q8N8A2 993 aa10.78□□□□□ -0.68
DDB1-203ENST00000451943 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
DDB1-203ENST00000451943 PXDNLA1KZ92 1463 aa10.78□□□□□ -0.68
DDB1-203ENST00000451943 FAM208AQ9UK61 1670 aaKnown RBP10.78□□□□□ -0.68
DDB1-203ENST00000451943 NRAPQ86VF7 1730 aa10.78□□□□□ -0.68
DDB1-203ENST00000451943 CRYBG1Q9Y4K1 1723 aa10.78□□□□□ -0.68
DDB1-203ENST00000451943 RGPD2P0DJD1 1756 aa10.77□□□□□ -0.68
DDB1-203ENST00000451943 COL18A1P39060 1754 aa10.77□□□□□ -0.68
DDB1-203ENST00000451943 KDM3BQ7LBC6 1761 aa10.77□□□□□ -0.68
DDB1-203ENST00000451943 ATP10DQ9P241 1426 aa10.77□□□□□ -0.68
DDB1-203ENST00000451943 EIF4A1P60842 406 aaKnown RBP10.77□□□□□ -0.69
DDB1-203ENST00000451943 CHRNA2Q15822 529 aa10.77□□□□□ -0.69
DDB1-203ENST00000451943 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
DDB1-203ENST00000451943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
DDB1-203ENST00000451943 CACNA1FO60840 1977 aa10.77□□□□□ -0.69
DDB1-203ENST00000451943 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
DDB1-203ENST00000451943 SF3B2Q13435 895 aaKnown RBP10.76□□□□□ -0.69
DDB1-203ENST00000451943 G2E3Q7L622 706 aa10.76□□□□□ -0.69
DDB1-203ENST00000451943 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
DDB1-203ENST00000451943 LGR6Q9HBX8 967 aa10.76□□□□□ -0.69
DDB1-203ENST00000451943 SPATA31A1Q5TZJ5 1347 aa10.76□□□□□ -0.69
DDB1-203ENST00000451943 HEG1Q9ULI3 1381 aa10.76□□□□□ -0.69
DDB1-203ENST00000451943 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
DDB1-203ENST00000451943 TEFQ10587 303 aa10.75□□□□□ -0.69
DDB1-203ENST00000451943 FLIIQ13045 1269 aa10.75□□□□□ -0.69
DDB1-203ENST00000451943 C1orf141Q5JVX7 400 aa10.75□□□□□ -0.69
DDB1-203ENST00000451943 CEP85Q6P2H3 762 aa10.75□□□□□ -0.69
DDB1-203ENST00000451943 C1orf115Q9H7X2 142 aa10.75□□□□□ -0.69
DDB1-203ENST00000451943 N4BP2Q86UW6 1770 aaPredicted RBP10.75□□□□□ -0.69
DDB1-203ENST00000451943 A0A0G2JS52 829 aa10.74□□□□□ -0.69
DDB1-203ENST00000451943 BMP2KLQ5H9B9 411 aa10.74□□□□□ -0.69
DDB1-203ENST00000451943 FAM182BQ5T319 152 aa10.74□□□□□ -0.69
DDB1-203ENST00000451943 BTBD11A6QL63 1104 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 SEC24BO95487 1268 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 EVA1CP58658 441 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 HDGFL1Q5TGJ6 251 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 ANKRD45Q5TZF3 282 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 MEIS3Q99687 375 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 LNPKQ9C0E8 428 aa10.73□□□□□ -0.69
DDB1-203ENST00000451943 UPF2Q9HAU5 1272 aaKnown RBP10.73□□□□□ -0.69
DDB1-203ENST00000451943 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms